RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 SLC9C2Q5TAH2 1124 aa18.04■□□□□ 0.48
TRAPPC9-205ENST00000518839 PRPF40BQ6NWY9 871 aaKnown RBP18.04■□□□□ 0.48
TRAPPC9-205ENST00000518839 SEC62Q99442 399 aaKnown RBP18.04■□□□□ 0.48
TRAPPC9-205ENST00000518839 TM6SF1Q9BZW5 370 aa18.04■□□□□ 0.48
TRAPPC9-205ENST00000518839 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC9-205ENST00000518839 LTBP1Q14766 1721 aa18.03■□□□□ 0.48
TRAPPC9-205ENST00000518839 PSMA5P28066 241 aa18.03■□□□□ 0.48
TRAPPC9-205ENST00000518839 KRT32Q14532 448 aa18.03■□□□□ 0.48
TRAPPC9-205ENST00000518839 CREB3L3Q68CJ9 461 aa18.03■□□□□ 0.48
TRAPPC9-205ENST00000518839 STYK1Q6J9G0 422 aa18.03■□□□□ 0.48
TRAPPC9-205ENST00000518839 ZNF804AQ7Z570 1209 aa18.03■□□□□ 0.48
TRAPPC9-205ENST00000518839 GGA1Q9UJY5 639 aa18.03■□□□□ 0.48
TRAPPC9-205ENST00000518839 ATP6V0A2Q9Y487 856 aa18.03■□□□□ 0.48
TRAPPC9-205ENST00000518839 MAST2Q6P0Q8 1798 aa18.03■□□□□ 0.48
TRAPPC9-205ENST00000518839 IRS2Q9Y4H2 1338 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 SLC27A2O14975 620 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 FRAT2O75474 233 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 PDE6AP16499 860 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 NEK4P51957 841 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 GPSM2P81274 684 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 CACNA1SQ13698 1873 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 TSGA10IPQ3SY00 556 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 CCDC129Q6ZRS4 1044 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 OSBP2Q969R2 916 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 CTNNA3Q9UI47 895 aa18.02■□□□□ 0.48
TRAPPC9-205ENST00000518839 H0YIN7 160 aa18.01■□□□□ 0.47
TRAPPC9-205ENST00000518839 M0R2C6 588 aa18.01■□□□□ 0.47
TRAPPC9-205ENST00000518839 ZGPATQ8N5A5 531 aaKnown RBP18.01■□□□□ 0.47
TRAPPC9-205ENST00000518839 LRP2BPQ9P2M1 347 aa18.01■□□□□ 0.47
TRAPPC9-205ENST00000518839 NSFL1CQ9UNZ2 370 aaKnown RBP18.01■□□□□ 0.47
TRAPPC9-205ENST00000518839 KIAA1551Q9HCM1 1747 aa18.01■□□□□ 0.47
TRAPPC9-205ENST00000518839 ZNF532Q9HCE3 1301 aa18■□□□□ 0.47
TRAPPC9-205ENST00000518839 DLEC1Q9Y238 1755 aa18■□□□□ 0.47
TRAPPC9-205ENST00000518839 UFL1O94874 794 aa18■□□□□ 0.47
TRAPPC9-205ENST00000518839 CHGBP05060 677 aa18■□□□□ 0.47
TRAPPC9-205ENST00000518839 HSPD1P10809 573 aaKnown RBP18■□□□□ 0.47
TRAPPC9-205ENST00000518839 ILDR1Q86SU0 546 aaPredicted RBP18■□□□□ 0.47
TRAPPC9-205ENST00000518839 C2CD5Q86YS7 1000 aa18■□□□□ 0.47
TRAPPC9-205ENST00000518839 RASEFQ8IZ41 740 aa18■□□□□ 0.47
TRAPPC9-205ENST00000518839 TCRBV5S4A2TA0A5A2 114 aa17.99■□□□□ 0.47
TRAPPC9-205ENST00000518839 GPAA1O43292 621 aa17.99■□□□□ 0.47
TRAPPC9-205ENST00000518839 KLRK1P26718 216 aa17.99■□□□□ 0.47
TRAPPC9-205ENST00000518839 SPTY2D1Q68D10 685 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-205ENST00000518839 MAGEB6Q8N7X4 407 aa17.99■□□□□ 0.47
TRAPPC9-205ENST00000518839 CNKSR1Q969H4 720 aa17.99■□□□□ 0.47
TRAPPC9-205ENST00000518839 WWC3Q9ULE0 1092 aa17.99■□□□□ 0.47
TRAPPC9-205ENST00000518839 COL1A1P02452 1464 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-205ENST00000518839 WTIPA6NIX2 430 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 CD2BP2O95400 341 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 WDR66Q8TBY9 1149 aa17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 AIDAQ96BJ3 306 aa17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 JAKMIP1Q96N16 626 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 PUS7LQ9H0K6 701 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 ZSWIM6Q9HCJ5 1215 aa17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 IQSEC3Q9UPP2 1182 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 CYP46A1Q9Y6A2 500 aa17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 RPAP1Q9BWH6 1393 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 SALL1Q9NSC2 1324 aa17.98■□□□□ 0.47
TRAPPC9-205ENST00000518839 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 GNAT2P19087 354 aa17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 SLFNL1Q499Z3 407 aa17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 TDRD7Q8NHU6 1098 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 TBC1D16Q8TBP0 767 aa17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 ZNF622Q969S3 477 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 RAI14Q9P0K7 980 aa17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 ABCF2Q9UG63 623 aa17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 LAMA4Q16363 1823 aa17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 KIF13BQ9NQT8 1826 aa17.97■□□□□ 0.47
TRAPPC9-205ENST00000518839 CASTP20810 708 aaKnown RBP17.96■□□□□ 0.47
TRAPPC9-205ENST00000518839 VPS53Q5VIR6 699 aa17.96■□□□□ 0.47
TRAPPC9-205ENST00000518839 MPNDQ8N594 471 aa17.96■□□□□ 0.47
TRAPPC9-205ENST00000518839 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.47
TRAPPC9-205ENST00000518839 ZMYM6O95789 1325 aa17.96■□□□□ 0.46
TRAPPC9-205ENST00000518839 C6orf229H3BNL8 230 aa17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 HMGB1P09429 215 aaKnown RBP17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 IL1R1P14778 569 aa17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 IMMTQ16891 758 aaKnown RBP17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 CC2D2BQ6DHV5 1058 aa17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 BLOC1S2Q6QNY1 142 aa17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 RUFY3Q7L099 469 aa17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 TXNRD3Q86VQ6 643 aa17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 TTC14Q96N46 770 aa17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 EYA3Q99504 573 aa17.95■□□□□ 0.46
TRAPPC9-205ENST00000518839 CYP21A2P08686 494 aa17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 CYP7A1P22680 504 aa17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 CHAF1AQ13111 956 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 ANKRD1Q15327 319 aa17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 ALX1Q15699 326 aa17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 GRIPAP1Q4V328 841 aa17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 NAA16Q6N069 864 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 STRBPQ96SI9 672 aaKnown RBP17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 ALDH8A1Q9H2A2 487 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 CD209Q9NNX6 404 aa17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 PDRG1Q9NUG6 133 aa17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 POLLQ9UGP5 575 aa17.94■□□□□ 0.46
TRAPPC9-205ENST00000518839 SLX4Q8IY92 1834 aa17.93■□□□□ 0.46
TRAPPC9-205ENST00000518839 MBD4O95243 580 aa17.93■□□□□ 0.46
TRAPPC9-205ENST00000518839 ADCK5Q3MIX3 580 aa17.93■□□□□ 0.46
TRAPPC9-205ENST00000518839 DPP8Q6V1X1 898 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms