RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 NIM1KQ8IY84 436 aa9.49□□□□□ -0.89
CSGALNACT1-206ENST00000518542 JMYQ8N9B5 988 aa9.49□□□□□ -0.89
CSGALNACT1-206ENST00000518542 MED23Q9ULK4 1368 aa9.49□□□□□ -0.89
CSGALNACT1-206ENST00000518542 TIAM2Q8IVF5 1701 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 RAB11FIP3O75154 756 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 SLC5A1P13866 664 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 PRELPP51888 382 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 PLCB2Q00722 1185 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 TFCP2Q12800 502 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 MKRN3Q13064 507 aaKnown RBP9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 CAVIN4Q5BKX8 364 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 C15orf52Q6ZUT6 534 aaKnown RBP9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 ZNF804AQ7Z570 1209 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 VGLL2Q8N8G2 317 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 LPIN2Q92539 896 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 EXOC6BQ9Y2D4 811 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 ZC3H4Q9UPT8 1303 aaKnown RBP9.48□□□□□ -0.89
CSGALNACT1-206ENST00000518542 SNAP23O00161 211 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 SASH1O94885 1247 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 POTEIP0CG38 1075 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 EIF6P56537 245 aaKnown RBP9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 ATP2B3Q16720 1220 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 DOK7Q18PE1 504 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 DPY19L2Q6NUT2 758 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 VPS37DQ86XT2 251 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 RBM46Q8TBY0 533 aaKnown RBP9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 KLRG1Q96E93 195 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 KIF1BPQ96EK5 621 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 GPR101Q96P66 508 aaPredicted RBP9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 COA1Q9GZY4 146 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 RWDD1Q9H446 243 aaPredicted RBP9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 ZNRF3Q9ULT6 936 aa9.47□□□□□ -0.89
CSGALNACT1-206ENST00000518542 WTIPA6NIX2 430 aaPredicted RBP9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 FZD9O00144 591 aa9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 APBB1O00213 710 aa9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 ECE2O60344 883 aa9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 FGFR2P21802 821 aa9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 HIBADHP31937 336 aaKnown RBP9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 HDAC1Q13547 482 aaPredicted RBP9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 PODNQ7Z5L7 613 aa9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 NEUROD6Q96NK8 337 aa9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 DCTPP1Q9H773 170 aa9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 DBNDD1Q9H9R9 158 aa9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GPR108Q9NPR9 543 aa9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GNL3LQ9NVN8 582 aaKnown RBP9.46□□□□□ -0.9
CSGALNACT1-206ENST00000518542 ARAP2Q8WZ64 1704 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 MYH13Q9UKX3 1938 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 A0A1B0GUL7 405 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GTPBP6O43824 516 aaPredicted RBP9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 FRAT2O75474 233 aaPredicted RBP9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GYG1P46976 350 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TIMM10P62072 90 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TNIP1Q15025 636 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GORABQ5T7V8 394 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TXNRD3Q86VQ6 643 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 CLASRPQ8N2M8 674 aaKnown RBP9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 RHPN1Q8TCX5 695 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GCC1Q96CN9 775 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 FAM84BQ96KN1 310 aaPredicted RBP9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 PSME4Q14997 1843 aa9.45□□□□□ -0.9
CSGALNACT1-206ENST00000518542 KLRK1P26718 216 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TNNI3KQ59H18 835 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 CIAPIN1Q6FI81 312 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 FBXO33Q7Z6M2 555 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 LRRCC1Q9C099 1032 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 CD209Q9NNX6 404 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 FPGT-TNNI3KV9GXZ4 949 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 KDM2BQ8NHM5 1336 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 IRS2Q9Y4H2 1338 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 ZNF609O15014 1411 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 COL4A5P29400 1685 aa9.44□□□□□ -0.9
CSGALNACT1-206ENST00000518542 SCN9AQ15858 1988 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 USP17L3A6NCW0 530 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 USP17L4A6NCW7 530 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GLTPD2A6NH11 291 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 YDJCA8MPS7 323 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 RAD17O75943 681 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 IFIT2P09913 472 aaKnown RBP9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 IL1R1P14778 569 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 BCAMP50895 628 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 CXCL9Q07325 125 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 FSTL1Q12841 308 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 CCDC158Q5M9N0 1113 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TTLL5Q6EMB2 1281 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 USP17L1Q7RTZ2 530 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 AACSQ86V21 672 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GPC2Q8N158 579 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 BCL11AQ9H165 835 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 IL1RAPL2Q9NP60 686 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GJA3Q9Y6H8 435 aa9.43□□□□□ -0.9
CSGALNACT1-206ENST00000518542 ZNF541Q9H0D2 1346 aa9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 PSMD14O00487 310 aa9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 ADORA1P30542 326 aa9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GTF2IP78347 998 aa9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 STRIP1Q5VSL9 837 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms