RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 FRAT2O75474 233 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-217ENST00000518538 MMP14P50281 582 aa27.16■■□□□ 1.94
VEGFA-217ENST00000518538 HIRAP54198 1017 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-217ENST00000518538 TIMM10P62072 90 aa27.16■■□□□ 1.94
VEGFA-217ENST00000518538 TBC1D10BQ4KMP7 808 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-217ENST00000518538 CERS5Q8N5B7 392 aa27.16■■□□□ 1.94
VEGFA-217ENST00000518538 IQSEC3Q9UPP2 1182 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-217ENST00000518538 JAG2Q9Y219 1238 aa27.16■■□□□ 1.94
VEGFA-217ENST00000518538 EGFRP00533 1210 aa27.15■■□□□ 1.94
VEGFA-217ENST00000518538 ADORA1P30542 326 aa27.15■■□□□ 1.94
VEGFA-217ENST00000518538 KIF4BQ2VIQ3 1234 aa27.15■■□□□ 1.94
VEGFA-217ENST00000518538 OGFOD1Q8N543 542 aa27.15■■□□□ 1.94
VEGFA-217ENST00000518538 ZC3H15Q8WU90 426 aaKnown RBP27.15■■□□□ 1.94
VEGFA-217ENST00000518538 GPR108Q9NPR9 543 aa27.15■■□□□ 1.94
VEGFA-217ENST00000518538 HSP90AB4PQ58FF6 505 aa27.14■■□□□ 1.94
VEGFA-217ENST00000518538 KIAA0825Q8IV33 1275 aa27.14■■□□□ 1.94
VEGFA-217ENST00000518538 XAGE2Q96GT9 111 aa27.14■■□□□ 1.94
VEGFA-217ENST00000518538 GNL3LQ9NVN8 582 aaKnown RBP27.14■■□□□ 1.94
VEGFA-217ENST00000518538 EXOC6BQ9Y2D4 811 aa27.14■■□□□ 1.94
VEGFA-217ENST00000518538 MFSD14BQ5SR56 506 aa27.13■■□□□ 1.93
VEGFA-217ENST00000518538 RBM26Q5T8P6 1007 aaKnown RBP27.13■■□□□ 1.93
VEGFA-217ENST00000518538 MAP1SQ66K74 1059 aaPredicted RBP27.13■■□□□ 1.93
VEGFA-217ENST00000518538 ERC1Q8IUD2 1116 aa27.13■■□□□ 1.93
VEGFA-217ENST00000518538 NEUROD6Q96NK8 337 aa27.13■■□□□ 1.93
VEGFA-217ENST00000518538 CRBNQ96SW2 442 aa27.13■■□□□ 1.93
VEGFA-217ENST00000518538 MYOZ2Q9NPC6 264 aa27.13■■□□□ 1.93
VEGFA-217ENST00000518538 PGAP2Q9UHJ9 254 aa27.13■■□□□ 1.93
VEGFA-217ENST00000518538 HDAC9Q9UKV0 1011 aa27.13■■□□□ 1.93
VEGFA-217ENST00000518538 ZBTB22O15209 634 aa27.12■■□□□ 1.93
VEGFA-217ENST00000518538 HSPA6P17066 643 aa27.12■■□□□ 1.93
VEGFA-217ENST00000518538 PHKA1P46020 1223 aa27.12■■□□□ 1.93
VEGFA-217ENST00000518538 CHAF1AQ13111 956 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-217ENST00000518538 CCDC102BQ68D86 513 aa27.12■■□□□ 1.93
VEGFA-217ENST00000518538 CNTROBQ8N137 903 aa27.12■■□□□ 1.93
VEGFA-217ENST00000518538 TNNI3KQ59H18 835 aa27.11■■□□□ 1.93
VEGFA-217ENST00000518538 TBC1D22AQ8WUA7 517 aa27.11■■□□□ 1.93
VEGFA-217ENST00000518538 FPGT-TNNI3KV9GXZ4 949 aa27.11■■□□□ 1.93
VEGFA-217ENST00000518538 SEMA3EO15041 775 aa27.1■■□□□ 1.93
VEGFA-217ENST00000518538 SUPT16HQ9Y5B9 1047 aaKnown RBP27.1■■□□□ 1.93
VEGFA-217ENST00000518538 COL1A1P02452 1464 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-217ENST00000518538 ITGBL1O95965 494 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-217ENST00000518538 WDR66Q8TBY9 1149 aa27.08■■□□□ 1.93
VEGFA-217ENST00000518538 DENND2AQ9ULE3 1009 aa27.08■■□□□ 1.93
VEGFA-217ENST00000518538 PASKQ96RG2 1323 aa27.08■■□□□ 1.93
VEGFA-217ENST00000518538 F8W031 263 aaPredicted RBP27.07■■□□□ 1.92
VEGFA-217ENST00000518538 GORABQ5T7V8 394 aa27.07■■□□□ 1.92
VEGFA-217ENST00000518538 MYH13Q9UKX3 1938 aa27.07■■□□□ 1.92
VEGFA-217ENST00000518538 RAB11FIP3O75154 756 aa27.06■■□□□ 1.92
VEGFA-217ENST00000518538 SCARF1Q14162 830 aa27.06■■□□□ 1.92
VEGFA-217ENST00000518538 RHPN1Q8TCX5 695 aa27.06■■□□□ 1.92
VEGFA-217ENST00000518538 SUGT1Q9Y2Z0 365 aa27.06■■□□□ 1.92
VEGFA-217ENST00000518538 RASGRF1Q13972 1273 aa27.05■■□□□ 1.92
VEGFA-217ENST00000518538 KIF1BPQ96EK5 621 aa27.05■■□□□ 1.92
VEGFA-217ENST00000518538 GGA3Q9NZ52 723 aa27.05■■□□□ 1.92
VEGFA-217ENST00000518538 TTF2Q9UNY4 1162 aaKnown RBP27.05■■□□□ 1.92
VEGFA-217ENST00000518538 PDS5AQ29RF7 1337 aaKnown RBP27.05■■□□□ 1.92
VEGFA-217ENST00000518538 WNT10BO00744 389 aa27.04■■□□□ 1.92
VEGFA-217ENST00000518538 APLP1P51693 650 aa27.04■■□□□ 1.92
VEGFA-217ENST00000518538 MTMR14Q8NCE2 650 aa27.04■■□□□ 1.92
VEGFA-217ENST00000518538 DCPSQ96C86 337 aaKnown RBP27.04■■□□□ 1.92
VEGFA-217ENST00000518538 ZBED3Q96IU2 234 aaPredicted RBP27.04■■□□□ 1.92
VEGFA-217ENST00000518538 DBNDD2Q9BQY9 259 aa27.04■■□□□ 1.92
VEGFA-217ENST00000518538 PCDHB15Q9Y5E8 787 aa27.04■■□□□ 1.92
VEGFA-217ENST00000518538 ASTN2O75129 1339 aaPredicted RBP27.03■■□□□ 1.92
VEGFA-217ENST00000518538 ARID4AP29374 1257 aaPredicted RBP27.03■■□□□ 1.92
VEGFA-217ENST00000518538 AAMPQ13685 434 aa27.03■■□□□ 1.92
VEGFA-217ENST00000518538 DLGAP5Q15398 846 aa27.03■■□□□ 1.92
VEGFA-217ENST00000518538 GRIK5Q16478 980 aa27.03■■□□□ 1.92
VEGFA-217ENST00000518538 NBPF9Q3BBW0 867 aa27.03■■□□□ 1.92
VEGFA-217ENST00000518538 CDC37L1Q7L3B6 337 aa27.03■■□□□ 1.92
VEGFA-217ENST00000518538 EAF2Q96CJ1 260 aaPredicted RBP27.03■■□□□ 1.92
VEGFA-217ENST00000518538 SALL1Q9NSC2 1324 aa27.03■■□□□ 1.92
VEGFA-217ENST00000518538 UQCRFS1P1P0C7P4 283 aa27.02■■□□□ 1.92
VEGFA-217ENST00000518538 GLIS2Q9BZE0 524 aaPredicted RBP27.02■■□□□ 1.92
VEGFA-217ENST00000518538 DBNLQ9UJU6 430 aaKnown RBP27.02■■□□□ 1.92
VEGFA-217ENST00000518538 SERPINA10Q9UK55 444 aa27.02■■□□□ 1.92
VEGFA-217ENST00000518538 PITPNM2Q9BZ72 1349 aa27.01■■□□□ 1.91
VEGFA-217ENST00000518538 APBB1O00213 710 aa27.01■■□□□ 1.91
VEGFA-217ENST00000518538 CFAP100Q494V2 611 aa27.01■■□□□ 1.91
VEGFA-217ENST00000518538 CCDC158Q5M9N0 1113 aa27.01■■□□□ 1.91
VEGFA-217ENST00000518538 ANGEL2Q5VTE6 544 aaKnown RBP27.01■■□□□ 1.91
VEGFA-217ENST00000518538 KRT26Q7Z3Y9 468 aa27.01■■□□□ 1.91
VEGFA-217ENST00000518538 AACSQ86V21 672 aa27.01■■□□□ 1.91
VEGFA-217ENST00000518538 CCDC8Q9H0W5 538 aaPredicted RBP27.01■■□□□ 1.91
VEGFA-217ENST00000518538 IL1RAPL2Q9NP60 686 aa27.01■■□□□ 1.91
VEGFA-217ENST00000518538 MAST3O60307 1309 aa27■■□□□ 1.91
VEGFA-217ENST00000518538 HDLBPQ00341 1268 aaKnown RBP27■■□□□ 1.91
VEGFA-217ENST00000518538 CLASRPQ8N2M8 674 aaKnown RBP27■■□□□ 1.91
VEGFA-217ENST00000518538 ZGPATQ8N5A5 531 aaKnown RBP27■■□□□ 1.91
VEGFA-217ENST00000518538 TLR7Q9NYK1 1049 aaKnown RBP27■■□□□ 1.91
VEGFA-217ENST00000518538 SPDYE2BA6NHP3 402 aa26.99■■□□□ 1.91
VEGFA-217ENST00000518538 TRAF5O00463 557 aa26.99■■□□□ 1.91
VEGFA-217ENST00000518538 SPDYE6P0CI01 402 aa26.99■■□□□ 1.91
VEGFA-217ENST00000518538 TTC39AQ5SRH9 613 aa26.99■■□□□ 1.91
VEGFA-217ENST00000518538 SULF1Q8IWU6 871 aa26.99■■□□□ 1.91
VEGFA-217ENST00000518538 DCTPP1Q9H773 170 aa26.99■■□□□ 1.91
VEGFA-217ENST00000518538 HMG20BQ9P0W2 317 aa26.99■■□□□ 1.91
VEGFA-217ENST00000518538 CRKP46108 304 aa26.98■■□□□ 1.91
VEGFA-217ENST00000518538 RBM5P52756 815 aaKnown RBP eCLIP26.98■■□□□ 1.911e-9■□□□□ 9.1
VEGFA-217ENST00000518538 USP48Q86UV5 1035 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms