RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 LINC01387J3KSC0 135 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 SMNDC1O75940 238 aaKnown RBP eCLIP6.74□□□□□ -1.33
PABPC1-206ENST00000518293 EDN3P14138 238 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 SSTR4P31391 388 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 PLCB3Q01970 1234 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 ZSCAN29Q8IWY8 852 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-206ENST00000518293 GALNT12Q8IXK2 581 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 HHIPQ96QV1 700 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 CSRNP1Q96S65 589 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 OSMRQ99650 979 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 ZKSCAN3Q9BRR0 538 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 LACRTQ9GZZ8 138 aa6.74□□□□□ -1.33
PABPC1-206ENST00000518293 CDC27P30260 824 aa6.73□□□□□ -1.33
PABPC1-206ENST00000518293 CD68P34810 354 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-206ENST00000518293 GALNT11Q8NCW6 608 aa6.73□□□□□ -1.33
PABPC1-206ENST00000518293 CEP41Q9BYV8 373 aa6.73□□□□□ -1.33
PABPC1-206ENST00000518293 DNAJC25Q9H1X3 360 aa6.73□□□□□ -1.33
PABPC1-206ENST00000518293 STOML1Q9UBI4 398 aa6.73□□□□□ -1.33
PABPC1-206ENST00000518293 A0A1W2PP55 124 aa6.72□□□□□ -1.33
PABPC1-206ENST00000518293 FAM177BA6PVY3 158 aa6.72□□□□□ -1.33
PABPC1-206ENST00000518293 PDE2AO00408 941 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-206ENST00000518293 DHX15O43143 795 aaKnown RBP6.72□□□□□ -1.33
PABPC1-206ENST00000518293 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
PABPC1-206ENST00000518293 FAM117BQ6P1L5 589 aa6.72□□□□□ -1.33
PABPC1-206ENST00000518293 TXNDC11Q6PKC3 985 aa6.72□□□□□ -1.33
PABPC1-206ENST00000518293 ACAD11Q709F0 780 aa6.72□□□□□ -1.33
PABPC1-206ENST00000518293 NXPE3Q969Y0 559 aa6.72□□□□□ -1.33
PABPC1-206ENST00000518293 CCDC74AQ96AQ1 378 aa6.72□□□□□ -1.33
PABPC1-206ENST00000518293 ZBTB7CA1YPR0 619 aa6.71□□□□□ -1.34
PABPC1-206ENST00000518293 IGLV1-40P01703 118 aa6.71□□□□□ -1.34
PABPC1-206ENST00000518293 CDC25BP30305 580 aa6.71□□□□□ -1.34
PABPC1-206ENST00000518293 FMR1Q06787 632 aaKnown RBP eCLIP6.71□□□□□ -1.345e-11■■■■■ 39.1
PABPC1-206ENST00000518293 TMEM102Q8N9M5 508 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-206ENST00000518293 UBL7Q96S82 380 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-206ENST00000518293 SH2B1Q9NRF2 756 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-206ENST00000518293 CD97P48960 835 aa6.7□□□□□ -1.34
PABPC1-206ENST00000518293 ENOX2Q16206 610 aaKnown RBP6.7□□□□□ -1.34
PABPC1-206ENST00000518293 UVSSAQ2YD98 709 aa6.7□□□□□ -1.34
PABPC1-206ENST00000518293 MCTP1Q6DN14 999 aa6.7□□□□□ -1.34
PABPC1-206ENST00000518293 DNAJC14Q6Y2X3 702 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-206ENST00000518293 KLHL23Q8NBE8 558 aa6.7□□□□□ -1.34
PABPC1-206ENST00000518293 EPS8L3Q8TE67 593 aaKnown RBP6.7□□□□□ -1.34
PABPC1-206ENST00000518293 KRTAP4-12Q9BQ66 201 aa6.7□□□□□ -1.34
PABPC1-206ENST00000518293 ADAM19Q9H013 955 aa6.7□□□□□ -1.34
PABPC1-206ENST00000518293 NPHS2Q9NP85 383 aa6.7□□□□□ -1.34
PABPC1-206ENST00000518293 PNMA6FA0A0J9YX94 578 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 ANKRD33BA6NCL7 494 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 FSCN2O14926 492 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 COBLO75128 1261 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 WISP1O95388 367 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 PTPRAP18433 802 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 MAPK8P45983 427 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 TRIM26Q12899 539 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-206ENST00000518293 DUOXA2Q1HG44 320 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 KIAA0319Q5VV43 1072 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 UTP4Q969X6 686 aaKnown RBP6.69□□□□□ -1.34
PABPC1-206ENST00000518293 SETDB2Q96T68 719 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 TCF12Q99081 682 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 CARD10Q9BWT7 1032 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 BHLHE41Q9C0J9 482 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-206ENST00000518293 WWC3Q9ULE0 1092 aa6.69□□□□□ -1.34
PABPC1-206ENST00000518293 METTL12A8MUP2 240 aa6.68□□□□□ -1.34
PABPC1-206ENST00000518293 P4HBP07237 508 aaKnown RBP6.68□□□□□ -1.34
PABPC1-206ENST00000518293 EPHA1P21709 976 aa6.68□□□□□ -1.34
PABPC1-206ENST00000518293 CCDC27Q2M243 656 aa6.68□□□□□ -1.34
PABPC1-206ENST00000518293 PI16Q6UXB8 463 aa6.68□□□□□ -1.34
PABPC1-206ENST00000518293 CCNJLQ8IV13 435 aa6.68□□□□□ -1.34
PABPC1-206ENST00000518293 KCNK4Q9NYG8 393 aa6.68□□□□□ -1.34
PABPC1-206ENST00000518293 TM4SF5O14894 197 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 TGFB1P01137 390 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 GRIA4P48058 902 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 CABP4P57796 275 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 NFIAQ12857 509 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 ARMC10Q8N2F6 343 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 BSNDQ8WZ55 320 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 LIN7BQ9HAP6 207 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 SEC31BQ9NQW1 1179 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 SOX13Q9UN79 622 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 CCDC180Q9P1Z9 1646 aa6.67□□□□□ -1.34
PABPC1-206ENST00000518293 PAX4O43316 350 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 GRIK1P39086 918 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 IRAK1P51617 712 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 SPRED3Q2MJR0 410 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 KIAA1211Q6ZU35 1233 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 VN1R5Q7Z5H4 357 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 NPAS4Q8IUM7 802 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 GLIS3Q8NEA6 775 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 ASAP3Q8TDY4 903 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 FAM46AQ96IP4 442 aaKnown RBP6.66□□□□□ -1.34
PABPC1-206ENST00000518293 EHD4Q9H223 541 aa6.66□□□□□ -1.34
PABPC1-206ENST00000518293 COL17A1Q9UMD9 1497 aaPredicted RBP6.66□□□□□ -1.34
PABPC1-206ENST00000518293 A0A096LPE4 126 aa6.65□□□□□ -1.34
PABPC1-206ENST00000518293 A0A1W2PPZ6 126 aa6.65□□□□□ -1.34
PABPC1-206ENST00000518293 KIAA1324LA8MWY0 1029 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-206ENST00000518293 SART1O43290 800 aaKnown RBP6.65□□□□□ -1.34
PABPC1-206ENST00000518293 GADD45BO75293 160 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-206ENST00000518293 GRM2Q14416 872 aa6.65□□□□□ -1.34
PABPC1-206ENST00000518293 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
PABPC1-206ENST00000518293 TRIM42Q8IWZ5 723 aa6.65□□□□□ -1.34
PABPC1-206ENST00000518293 FOXD4L4Q8WXT5 416 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms