RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 PTF1AQ7RTS3 328 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 SEC62Q99442 399 aaKnown RBP9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 PIH1D3Q9NQM4 214 aaKnown RBP9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 CNNM1Q9NRU3 951 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 C10orf71Q711Q0 1435 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 HSP90AA1P07900 732 aaKnown RBP9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 ERFEQ4G0M1 354 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 TAF7LQ5H9L4 462 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 NEUROD6Q96NK8 337 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 ELP1O95163 1332 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 E7EWF7 191 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 GOLGA6L22H0YM25 854 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 COL9A3Q14050 684 aaPredicted RBP9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 FBXO33Q7Z6M2 555 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 SPATA5Q8NB90 893 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 ANAPC4Q9UJX5 808 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 MTMR6Q9Y217 621 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 GREB1LQ9C091 1923 aaPredicted RBP9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 IGHMBP2P38935 993 aaKnown RBP9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 PHKA1P46020 1223 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 RCAN1P53805 252 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 CHRNDQ07001 517 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 CCDC129Q6ZRS4 1044 aa9.54□□□□□ -0.88
ARFGEF1-204ENST00000518290 FGRP09769 529 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 RASGRF1Q13972 1273 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 C3orf67Q6ZVT6 689 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 CCNL1Q9UK58 526 aaPredicted RBP9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 STX6O43752 255 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 F13A1P00488 732 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 CHGBP05060 677 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 HCLS1P14317 486 aaPredicted RBP9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 PDE6AP16499 860 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 GNAT2P19087 354 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 SYT1P21579 422 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 L1TD1Q5T7N2 865 aaKnown RBP9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 FAM196AQ6ZSG2 479 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 AMIGO3Q86WK7 504 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 SEPT12Q8IYM1 358 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 PUS7LQ9H0K6 701 aaKnown RBP9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 SEC31BQ9NQW1 1179 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 MBD3O95983 291 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 ARHGEF1Q92888 912 aaKnown RBP9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 STRBPQ96SI9 672 aaKnown RBP9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 RTCBQ9Y3I0 505 aaKnown RBP9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 NDUFB9Q9Y6M9 179 aa9.53□□□□□ -0.88
ARFGEF1-204ENST00000518290 KAT6BQ8WYB5 2073 aa9.52□□□□□ -0.88
ARFGEF1-204ENST00000518290 GPAA1O43292 621 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 PDCP20941 246 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 ANKRD2Q9GZV1 360 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 MINPP1Q9UNW1 487 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 PLSCR1O15162 318 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 ANKRD18AQ8IVF6 992 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 GPT2Q8TD30 523 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 LRRC4BQ9NT99 713 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 PODXL2Q9NZ53 605 aa9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 CCDC9Q9Y3X0 531 aaKnown RBP9.52□□□□□ -0.89
ARFGEF1-204ENST00000518290 ROBO3Q96MS0 1386 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 NAA16Q6N069 864 aaPredicted RBP9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 ATP6V1DQ9Y5K8 247 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 FGAP02671 866 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 PCP11498 1178 aaKnown RBP9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 CPA1P15085 419 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 GJB2P29033 226 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 HOXA10P31260 410 aaPredicted RBP9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 ATL3Q6DD88 541 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 SNED1Q8TER0 1413 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 ANTXR2P58335 489 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 SGMS1Q86VZ5 419 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 MPHOSPH8Q99549 860 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 SMC3Q9UQE7 1217 aa9.51□□□□□ -0.89
ARFGEF1-204ENST00000518290 ZNF532Q9HCE3 1301 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 PATL2C9JE40 543 aaKnown RBP9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 CTDNEP1O95476 244 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 IMMTQ16891 758 aaKnown RBP9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 Q6ZUG5 572 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 AKT1S1Q96B36 256 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 SETDB2Q96T68 719 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 ZNF330Q9Y3S2 320 aaPredicted RBP9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 BAZ2AQ9UIF9 1905 aaKnown RBP9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 TPTE2Q6XPS3 522 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 NSUN7Q8NE18 718 aaKnown RBP9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 EPB41L4AQ9HCS5 686 aaPredicted RBP9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 WWC3Q9ULE0 1092 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 DENND2AQ9ULE3 1009 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 MORC2Q9Y6X9 1032 aaPredicted RBP9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 MYH6P13533 1939 aa9.5□□□□□ -0.89
ARFGEF1-204ENST00000518290 GNPATO15228 680 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 MRE11P49959 708 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 HMGN5P82970 282 aaKnown RBP9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 FKBP4Q02790 459 aaKnown RBP eCLIP9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 MAP3K12Q12852 859 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 GORABQ5T7V8 394 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 PI16Q6UXB8 463 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 TMC4Q7Z404 712 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 CCDC83Q8IWF9 413 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 FAM43AQ8N2R8 423 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms