RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 THUMPD2Q9BTF0 503 aaKnown RBP8.08□□□□□ -1.12
PABPC1-204ENST00000517990 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.08□□□□□ -1.12
PABPC1-204ENST00000517990 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
PABPC1-204ENST00000517990 FAM181BA6NEQ2 426 aa8.07□□□□□ -1.12
PABPC1-204ENST00000517990 VIL1P09327 827 aaKnown RBP8.07□□□□□ -1.12
PABPC1-204ENST00000517990 SREBF2Q12772 1141 aa8.07□□□□□ -1.12
PABPC1-204ENST00000517990 NFX1Q12986 1120 aaKnown RBP8.07□□□□□ -1.12
PABPC1-204ENST00000517990 TTLL12Q14166 644 aaPredicted RBP8.07□□□□□ -1.12
PABPC1-204ENST00000517990 SF3B3Q15393 1217 aaKnown RBP8.07□□□□□ -1.12
PABPC1-204ENST00000517990 NOM1Q5C9Z4 860 aaKnown RBP8.07□□□□□ -1.12
PABPC1-204ENST00000517990 FBXO46Q6PJ61 603 aaPredicted RBP8.07□□□□□ -1.12
PABPC1-204ENST00000517990 RASAL3Q86YV0 1011 aa8.07□□□□□ -1.12
PABPC1-204ENST00000517990 XAGE3Q8WTP9 111 aa8.07□□□□□ -1.12
PABPC1-204ENST00000517990 ANKIB1Q9P2G1 1089 aa8.07□□□□□ -1.12
PABPC1-204ENST00000517990 PAPPA2Q9BXP8 1791 aa8.07□□□□□ -1.12
PABPC1-204ENST00000517990 LRRC37AA6NMS7 1700 aa8.06□□□□□ -1.12
PABPC1-204ENST00000517990 RPS8P62241 208 aaKnown RBP8.06□□□□□ -1.12
PABPC1-204ENST00000517990 GPSM2P81274 684 aa8.06□□□□□ -1.12
PABPC1-204ENST00000517990 SCARF1Q14162 830 aa8.06□□□□□ -1.12
PABPC1-204ENST00000517990 PDIA6Q15084 440 aa8.06□□□□□ -1.12
PABPC1-204ENST00000517990 ANGEL2Q5VTE6 544 aaKnown RBP8.06□□□□□ -1.12
PABPC1-204ENST00000517990 RSBN1LQ6PCB5 846 aaPredicted RBP8.06□□□□□ -1.12
PABPC1-204ENST00000517990 PLPP6Q8IY26 295 aa8.06□□□□□ -1.12
PABPC1-204ENST00000517990 PLBD2Q8NHP8 589 aa8.06□□□□□ -1.12
PABPC1-204ENST00000517990 TBC1D16Q8TBP0 767 aa8.06□□□□□ -1.12
PABPC1-204ENST00000517990 ZNF296Q8WUU4 475 aaPredicted RBP8.06□□□□□ -1.12
PABPC1-204ENST00000517990 POLLQ9UGP5 575 aa8.06□□□□□ -1.12
PABPC1-204ENST00000517990 TSR3Q9UJK0 312 aaKnown RBP8.06□□□□□ -1.12
PABPC1-204ENST00000517990 GGA1Q9UJY5 639 aa8.06□□□□□ -1.12
PABPC1-204ENST00000517990 DUOX1Q9NRD9 1551 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 TNRC18O15417 2968 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-204ENST00000517990 FKTNO75072 461 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 UFL1O94874 794 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 TBC1D8O95759 1140 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 ALDH1A1P00352 501 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 EGFRP00533 1210 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 ANXA1P04083 346 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 USP17L8P0C7I0 530 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 MMP14P50281 582 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 FOSBP53539 338 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 RIPK4P57078 832 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 ZNF280AP59817 542 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-204ENST00000517990 INTS3Q68E01 1043 aaKnown RBP8.05□□□□□ -1.12
PABPC1-204ENST00000517990 DLK2Q6UY11 383 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 TRIM67Q6ZTA4 783 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 ARMC9Q7Z3E5 817 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 LRP10Q7Z4F1 713 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 OGFOD1Q8N543 542 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 CELF1Q92879 486 aaKnown RBP8.05□□□□□ -1.12
PABPC1-204ENST00000517990 PLEKHF1Q96S99 279 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 MYOZ2Q9NPC6 264 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 PODXL2Q9NZ53 605 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 RTL9Q8NET4 1388 aa8.05□□□□□ -1.12
PABPC1-204ENST00000517990 TAF1P21675 1872 aa8.04□□□□□ -1.12
PABPC1-204ENST00000517990 ZNF609O15014 1411 aa8.04□□□□□ -1.12
PABPC1-204ENST00000517990 GPR25O00155 361 aa8.04□□□□□ -1.12
PABPC1-204ENST00000517990 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
PABPC1-204ENST00000517990 RIOK3O14730 519 aaKnown RBP8.04□□□□□ -1.12
PABPC1-204ENST00000517990 TM4SF4P48230 202 aa8.04□□□□□ -1.12
PABPC1-204ENST00000517990 PROSER3Q2NL68 480 aa8.04□□□□□ -1.12
PABPC1-204ENST00000517990 CCDC152Q4G0S7 254 aa8.04□□□□□ -1.12
PABPC1-204ENST00000517990 PODNQ7Z5L7 613 aa8.04□□□□□ -1.12
PABPC1-204ENST00000517990 FAM89AQ96GI7 184 aa8.04□□□□□ -1.12
PABPC1-204ENST00000517990 MFRPQ9BY79 579 aa8.04□□□□□ -1.12
PABPC1-204ENST00000517990 DBF4Q9UBU7 674 aaPredicted RBP8.04□□□□□ -1.12
PABPC1-204ENST00000517990 MYO3BQ8WXR4 1341 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 USP17L3A6NCW0 530 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 USP17L4A6NCW7 530 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 HOXB7P09629 217 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 ATP2B4P23634 1241 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 INHBEP58166 350 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 HDGFL1Q5TGJ6 251 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 USP17L1Q7RTZ2 530 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 ZBTB38Q8NAP3 1195 aaPredicted RBP8.03□□□□□ -1.12
PABPC1-204ENST00000517990 ISCA1Q9BUE6 129 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 KCNQ5Q9NR82 932 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 HYPKQ9NX55 129 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 XDHP47989 1333 aa8.03□□□□□ -1.12
PABPC1-204ENST00000517990 ATP5J2-PTCD1G3V325 749 aa8.02□□□□□ -1.13
PABPC1-204ENST00000517990 UBE2Q2LH0YL09 131 aa8.02□□□□□ -1.13
PABPC1-204ENST00000517990 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
PABPC1-204ENST00000517990 PROX2Q3B8N5 592 aa8.02□□□□□ -1.13
PABPC1-204ENST00000517990 RTL5Q5HYW3 569 aaPredicted RBP8.02□□□□□ -1.13
PABPC1-204ENST00000517990 OTUD7BQ6GQQ9 843 aa8.02□□□□□ -1.13
PABPC1-204ENST00000517990 RIC3Q7Z5B4 369 aa8.02□□□□□ -1.13
PABPC1-204ENST00000517990 APOBEC3FQ8IUX4 373 aaKnown RBP8.02□□□□□ -1.13
PABPC1-204ENST00000517990 ANKRD18AQ8IVF6 992 aa8.02□□□□□ -1.13
PABPC1-204ENST00000517990 CFHR5Q9BXR6 569 aa8.02□□□□□ -1.13
PABPC1-204ENST00000517990 CHMP4AQ9BY43 222 aa8.02□□□□□ -1.13
PABPC1-204ENST00000517990 CHPF2Q9P2E5 772 aa8.02□□□□□ -1.13
PABPC1-204ENST00000517990 LAS1LQ9Y4W2 734 aaKnown RBP8.02□□□□□ -1.13
PABPC1-204ENST00000517990 ASTN2O75129 1339 aaPredicted RBP8.02□□□□□ -1.13
PABPC1-204ENST00000517990 MANSC4A6NHS7 340 aaPredicted RBP8.01□□□□□ -1.13
PABPC1-204ENST00000517990 FOXK1P85037 733 aa8.01□□□□□ -1.13
PABPC1-204ENST00000517990 ARHGEF6Q15052 776 aa8.01□□□□□ -1.13
PABPC1-204ENST00000517990 HABP4Q5JVS0 413 aaKnown RBP8.01□□□□□ -1.13
PABPC1-204ENST00000517990 FBXW7Q969H0 707 aa8.01□□□□□ -1.13
PABPC1-204ENST00000517990 ERO1AQ96HE7 468 aa8.01□□□□□ -1.13
PABPC1-204ENST00000517990 CDC5LQ99459 802 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms