RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 EXOSC10Q01780 885 aaKnown RBP31.49■■■□□ 2.63
COL13A1-210ENST00000517713 STK3Q13188 491 aa31.49■■■□□ 2.63
COL13A1-210ENST00000517713 ZNF532Q9HCE3 1301 aa31.49■■■□□ 2.63
COL13A1-210ENST00000517713 FGD1P98174 961 aa31.48■■■□□ 2.63
COL13A1-210ENST00000517713 DTNBO60941 627 aa31.48■■■□□ 2.63
COL13A1-210ENST00000517713 LRRC2Q9BYS8 371 aa31.48■■■□□ 2.63
COL13A1-210ENST00000517713 WWC3Q9ULE0 1092 aa31.48■■■□□ 2.63
COL13A1-210ENST00000517713 NCLP19338 710 aaKnown RBP31.47■■■□□ 2.63
COL13A1-210ENST00000517713 TPTE2Q6XPS3 522 aa31.47■■■□□ 2.63
COL13A1-210ENST00000517713 BRF1Q92994 677 aa31.47■■■□□ 2.63
COL13A1-210ENST00000517713 NLRP3Q96P20 1036 aa31.47■■■□□ 2.63
COL13A1-210ENST00000517713 TCRBV5S4A2TA0A5A2 114 aa31.46■■■□□ 2.63
COL13A1-210ENST00000517713 F13A1P00488 732 aa31.46■■■□□ 2.63
COL13A1-210ENST00000517713 PDIA4P13667 645 aaKnown RBP31.46■■■□□ 2.63
COL13A1-210ENST00000517713 FOXD4L6Q3SYB3 417 aaPredicted RBP31.46■■■□□ 2.63
COL13A1-210ENST00000517713 TRAPPC3LQ5T215 181 aa31.46■■■□□ 2.63
COL13A1-210ENST00000517713 FOXD4L3Q6VB84 417 aaPredicted RBP31.46■■■□□ 2.63
COL13A1-210ENST00000517713 GTF3C6Q969F1 213 aa31.46■■■□□ 2.63
COL13A1-210ENST00000517713 RFC4P35249 363 aa31.45■■■□□ 2.63
COL13A1-210ENST00000517713 MAP3K12Q12852 859 aa31.45■■■□□ 2.63
COL13A1-210ENST00000517713 MTMR6Q9Y217 621 aa31.45■■■□□ 2.63
COL13A1-210ENST00000517713 TAF1P21675 1872 aa31.45■■■□□ 2.62
COL13A1-210ENST00000517713 DOCK2Q92608 1830 aa31.45■■■□□ 2.62
COL13A1-210ENST00000517713 AGXT2Q9BYV1 514 aa31.44■■■□□ 2.62
COL13A1-210ENST00000517713 A0A1B0GUL6 1792 aa31.44■■■□□ 2.62
COL13A1-210ENST00000517713 FAM196AQ6ZSG2 479 aa31.44■■■□□ 2.62
COL13A1-210ENST00000517713 GPT2Q8TD30 523 aa31.44■■■□□ 2.62
COL13A1-210ENST00000517713 CELF1Q92879 486 aaKnown RBP31.44■■■□□ 2.62
COL13A1-210ENST00000517713 MINPP1Q9UNW1 487 aa31.44■■■□□ 2.62
COL13A1-210ENST00000517713 ATP6V1DQ9Y5K8 247 aa31.44■■■□□ 2.62
COL13A1-210ENST00000517713 C4AP0C0L4 1744 aa31.43■■■□□ 2.62
COL13A1-210ENST00000517713 PHF14O94880 888 aa31.43■■■□□ 2.62
COL13A1-210ENST00000517713 HAND2P61296 217 aa31.43■■■□□ 2.62
COL13A1-210ENST00000517713 UBE4AQ14139 1066 aa31.43■■■□□ 2.62
COL13A1-210ENST00000517713 LARP1BQ659C4 914 aaKnown RBP31.43■■■□□ 2.62
COL13A1-210ENST00000517713 ISY1Q9ULR0 285 aaKnown RBP31.43■■■□□ 2.62
COL13A1-210ENST00000517713 PDCP20941 246 aa31.42■■■□□ 2.62
COL13A1-210ENST00000517713 ZNF213O14771 459 aa31.42■■■□□ 2.62
COL13A1-210ENST00000517713 LRRC4BQ9NT99 713 aa31.42■■■□□ 2.62
COL13A1-210ENST00000517713 MAGEB6Q8N7X4 407 aa31.41■■■□□ 2.62
COL13A1-210ENST00000517713 CAVIN1Q6NZI2 390 aaKnown RBP31.41■■■□□ 2.62
COL13A1-210ENST00000517713 VPS37CA5D8V6 355 aaPredicted RBP31.4■■■□□ 2.62
COL13A1-210ENST00000517713 AIDAQ96BJ3 306 aa31.4■■■□□ 2.62
COL13A1-210ENST00000517713 PFKFB2O60825 505 aa31.39■■■□□ 2.62
COL13A1-210ENST00000517713 RPS8P62241 208 aaKnown RBP31.39■■■□□ 2.62
COL13A1-210ENST00000517713 STRBPQ96SI9 672 aaKnown RBP31.39■■■□□ 2.62
COL13A1-210ENST00000517713 ZNF804BA4D1E1 1349 aa31.39■■■□□ 2.62
COL13A1-210ENST00000517713 MBD3O95983 291 aa31.39■■■□□ 2.62
COL13A1-210ENST00000517713 APOBRQ0VD83 1088 aa31.39■■■□□ 2.62
COL13A1-210ENST00000517713 CCDC24Q8N4L8 307 aa31.39■■■□□ 2.62
COL13A1-210ENST00000517713 APPP05067 770 aa31.38■■■□□ 2.61
COL13A1-210ENST00000517713 SCRN1Q12765 414 aa31.38■■■□□ 2.61
COL13A1-210ENST00000517713 CHST3Q7LGC8 479 aa31.38■■■□□ 2.61
COL13A1-210ENST00000517713 FBXL16Q8N461 479 aa31.38■■■□□ 2.61
COL13A1-210ENST00000517713 GNL3LQ9NVN8 582 aaKnown RBP31.38■■■□□ 2.61
COL13A1-210ENST00000517713 USP48Q86UV5 1035 aa31.37■■■□□ 2.61
COL13A1-210ENST00000517713 GDPD2Q9HCC8 539 aa31.37■■■□□ 2.61
COL13A1-210ENST00000517713 ADRA2BP18089 450 aa31.37■■■□□ 2.61
COL13A1-210ENST00000517713 GYG1P46976 350 aa31.37■■■□□ 2.61
COL13A1-210ENST00000517713 TMEM87AQ8NBN3 555 aa31.36■■■□□ 2.61
COL13A1-210ENST00000517713 NCOA7Q8NI08 942 aa31.36■■■□□ 2.61
COL13A1-210ENST00000517713 CNPY2Q9Y2B0 182 aa31.36■■■□□ 2.61
COL13A1-210ENST00000517713 WTIPA6NIX2 430 aaPredicted RBP31.36■■■□□ 2.61
COL13A1-210ENST00000517713 NPHP1O15259 732 aa31.36■■■□□ 2.61
COL13A1-210ENST00000517713 MRE11P49959 708 aa31.36■■■□□ 2.61
COL13A1-210ENST00000517713 CAVIN4Q5BKX8 364 aa31.36■■■□□ 2.61
COL13A1-210ENST00000517713 LLPHQ9BRT6 129 aaKnown RBP31.36■■■□□ 2.61
COL13A1-210ENST00000517713 GAS2L3Q86XJ1 694 aa31.35■■■□□ 2.61
COL13A1-210ENST00000517713 MB21D2Q8IYB1 491 aaPredicted RBP31.35■■■□□ 2.61
COL13A1-210ENST00000517713 LRP2BPQ9P2M1 347 aa31.35■■■□□ 2.61
COL13A1-210ENST00000517713 IQSEC3Q9UPP2 1182 aaPredicted RBP31.35■■■□□ 2.61
COL13A1-210ENST00000517713 CARMIL3Q8ND23 1372 aa31.35■■■□□ 2.61
COL13A1-210ENST00000517713 JAK2O60674 1132 aa31.34■■■□□ 2.61
COL13A1-210ENST00000517713 XRCC6P12956 609 aaKnown RBP eCLIP31.34■■■□□ 2.61
COL13A1-210ENST00000517713 MCM5P33992 734 aa31.34■■■□□ 2.61
COL13A1-210ENST00000517713 KRT27Q7Z3Y8 459 aa31.34■■■□□ 2.61
COL13A1-210ENST00000517713 ZNF274Q96GC6 653 aaPredicted RBP31.34■■■□□ 2.61
COL13A1-210ENST00000517713 NSFL1CQ9UNZ2 370 aaKnown RBP31.34■■■□□ 2.61
COL13A1-210ENST00000517713 MBD4O95243 580 aa31.34■■■□□ 2.61
COL13A1-210ENST00000517713 NFIXQ14938 502 aa31.34■■■□□ 2.61
COL13A1-210ENST00000517713 ALX1Q15699 326 aa31.34■■■□□ 2.61
COL13A1-210ENST00000517713 ZSCAN23Q3MJ62 389 aa31.34■■■□□ 2.61
COL13A1-210ENST00000517713 RALYLQ86SE5 291 aaKnown RBP31.34■■■□□ 2.61
COL13A1-210ENST00000517713 TCHHQ07283 1943 aa31.34■■■□□ 2.61
COL13A1-210ENST00000517713 PATL2C9JE40 543 aaKnown RBP31.33■■■□□ 2.61
COL13A1-210ENST00000517713 TM4SF1P30408 202 aa31.33■■■□□ 2.61
COL13A1-210ENST00000517713 PRC1O43663 620 aa31.32■■■□□ 2.61
COL13A1-210ENST00000517713 CDC37L1Q7L3B6 337 aa31.32■■■□□ 2.61
COL13A1-210ENST00000517713 VPS37DQ86XT2 251 aa31.32■■■□□ 2.61
COL13A1-210ENST00000517713 ANKRD2Q9GZV1 360 aa31.32■■■□□ 2.61
COL13A1-210ENST00000517713 NBPF3Q9H094 633 aa31.32■■■□□ 2.61
COL13A1-210ENST00000517713 GRPEL1Q9HAV7 217 aa31.32■■■□□ 2.61
COL13A1-210ENST00000517713 RBM27Q9P2N5 1060 aaKnown RBP31.32■■■□□ 2.61
COL13A1-210ENST00000517713 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.32■■■□□ 2.6
COL13A1-210ENST00000517713 ZNF445P59923 1031 aa31.32■■■□□ 2.6
COL13A1-210ENST00000517713 SLC27A3Q5K4L6 730 aa31.32■■■□□ 2.6
COL13A1-210ENST00000517713 SMARCC2Q8TAQ2 1214 aa31.32■■■□□ 2.6
COL13A1-210ENST00000517713 PDIA3P30101 505 aaKnown RBP31.31■■■□□ 2.6
COL13A1-210ENST00000517713 EVCP57679 992 aa31.31■■■□□ 2.6
COL13A1-210ENST00000517713 FAM84BQ96KN1 310 aaPredicted RBP31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms