RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 FAM196BA6NMK8 535 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 VEGFBP49765 207 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 PTSQ03393 145 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 TAS1R3Q7RTX0 852 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 NME9Q86XW9 330 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 SIX5Q8N196 739 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 SLC4A9Q96Q91 983 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 ZNF358Q9NW07 568 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 KIAA1024Q9UPX6 916 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 CEP350Q5VT06 3117 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 NHSQ6T4R5 1651 aa10.94□□□□□ -0.66
NPM1-204ENST00000517671 A6NJY4 79 aa10.93□□□□□ -0.66
NPM1-204ENST00000517671 RHOQP17081 205 aa10.93□□□□□ -0.66
NPM1-204ENST00000517671 AMPHP49418 695 aa10.93□□□□□ -0.66
NPM1-204ENST00000517671 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
NPM1-204ENST00000517671 CHD4Q14839 1912 aa10.93□□□□□ -0.66
NPM1-204ENST00000517671 SPATA31C2B4DYI2 1134 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L10C9JJH3 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L12C9JPN9 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L21D6R901 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 H3BM21 787 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 SEC13P55735 322 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 PTK7Q13308 1070 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 CRTC2Q53ET0 693 aaPredicted RBP10.92□□□□□ -0.66
NPM1-204ENST00000517671 WDR44Q5JSH3 913 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 RAPGEF4Q8WZA2 1011 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 SMARCC1Q92922 1105 aaPredicted RBP10.92□□□□□ -0.66
NPM1-204ENST00000517671 CARD11Q9BXL7 1154 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 SLC12A5Q9H2X9 1139 aa10.92□□□□□ -0.66
NPM1-204ENST00000517671 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.91□□□□□ -0.66
NPM1-204ENST00000517671 CDK2AP1O14519 115 aa10.91□□□□□ -0.66
NPM1-204ENST00000517671 HSPA6P17066 643 aa10.91□□□□□ -0.66
NPM1-204ENST00000517671 NBPF10Q6P3W6 841 aaKnown RBP10.91□□□□□ -0.66
NPM1-204ENST00000517671 NBPF15Q8N660 670 aa10.91□□□□□ -0.66
NPM1-204ENST00000517671 NLGN2Q8NFZ4 835 aa10.91□□□□□ -0.66
NPM1-204ENST00000517671 RHBDD1Q8TEB9 315 aa10.91□□□□□ -0.66
NPM1-204ENST00000517671 NSD3Q9BZ95 1437 aa10.91□□□□□ -0.66
NPM1-204ENST00000517671 SFI1A8K8P3 1242 aa10.9□□□□□ -0.66
NPM1-204ENST00000517671 HOXC9P31274 260 aa10.9□□□□□ -0.66
NPM1-204ENST00000517671 DPYDQ12882 1025 aa10.9□□□□□ -0.66
NPM1-204ENST00000517671 COL23A1Q86Y22 540 aaPredicted RBP10.9□□□□□ -0.66
NPM1-204ENST00000517671 ANKMY2Q8IV38 441 aa10.9□□□□□ -0.66
NPM1-204ENST00000517671 PBXIP1Q96AQ6 731 aa10.9□□□□□ -0.66
NPM1-204ENST00000517671 TIMMDC1Q9NPL8 285 aa10.9□□□□□ -0.66
NPM1-204ENST00000517671 PAPPAQ13219 1627 aa10.9□□□□□ -0.66
NPM1-204ENST00000517671 WNK3Q9BYP7 1800 aa10.9□□□□□ -0.66
NPM1-204ENST00000517671 M0R2N6 131 aa10.89□□□□□ -0.67
NPM1-204ENST00000517671 YBX3P16989 372 aaKnown RBP eCLIP10.89□□□□□ -0.671e-48■□□□□ 10.1
NPM1-204ENST00000517671 TATP17735 454 aaPredicted RBP10.89□□□□□ -0.67
NPM1-204ENST00000517671 PHKA2P46019 1235 aa10.89□□□□□ -0.67
NPM1-204ENST00000517671 CCDC155Q8N6L0 562 aa10.89□□□□□ -0.67
NPM1-204ENST00000517671 FAM200AQ8TCP9 573 aa10.89□□□□□ -0.67
NPM1-204ENST00000517671 LTV1Q96GA3 475 aaPredicted RBP10.89□□□□□ -0.67
NPM1-204ENST00000517671 HINFPQ9BQA5 517 aa10.89□□□□□ -0.67
NPM1-204ENST00000517671 NIFKQ9BYG3 293 aaKnown RBP10.89□□□□□ -0.67
NPM1-204ENST00000517671 ERBB4Q15303 1308 aa10.89□□□□□ -0.67
NPM1-204ENST00000517671 SLC35F4A4IF30 521 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 NEUROD1Q13562 356 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 MTFR1Q15390 333 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 TNS4Q8IZW8 715 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 ARID3AQ99856 593 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 SMG6Q86US8 1419 aaKnown RBP10.88□□□□□ -0.67
NPM1-204ENST00000517671 PCDH11XQ9BZA7 1347 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 PCDH11YQ9BZA8 1340 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 RTL1A6NKG5 1358 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 NSD2O96028 1365 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 KIF24Q5T7B8 1368 aa10.88□□□□□ -0.67
NPM1-204ENST00000517671 NOVA2Q9UNW9 492 aaKnown RBP10.87□□□□□ -0.67
NPM1-204ENST00000517671 MAP3K19Q56UN5 1328 aa10.87□□□□□ -0.67
NPM1-204ENST00000517671 ATP10DQ9P241 1426 aa10.87□□□□□ -0.67
NPM1-204ENST00000517671 PPFIA3O75145 1194 aa10.86□□□□□ -0.67
NPM1-204ENST00000517671 SSFA2P28290 1259 aa10.86□□□□□ -0.67
NPM1-204ENST00000517671 C4orf17Q53FE4 359 aa10.86□□□□□ -0.67
NPM1-204ENST00000517671 GAS2L1Q99501 681 aaPredicted RBP10.86□□□□□ -0.67
NPM1-204ENST00000517671 SCHIP1Q9P0W5 487 aaPredicted RBP10.86□□□□□ -0.67
NPM1-204ENST00000517671 DYRK1BQ9Y463 629 aa10.86□□□□□ -0.67
NPM1-204ENST00000517671 A0A1W2PP64 1363 aa10.86□□□□□ -0.67
NPM1-204ENST00000517671 CD163L1Q9NR16 1453 aa10.85□□□□□ -0.67
NPM1-204ENST00000517671 DKK1O94907 266 aa10.85□□□□□ -0.67
NPM1-204ENST00000517671 TSEN2Q8NCE0 465 aaKnown RBP10.85□□□□□ -0.67
NPM1-204ENST00000517671 SIN3AQ96ST3 1273 aa10.85□□□□□ -0.67
NPM1-204ENST00000517671 CHMP3Q9Y3E7 222 aa10.85□□□□□ -0.67
NPM1-204ENST00000517671 QSER1Q2KHR3 1735 aa10.85□□□□□ -0.67
NPM1-204ENST00000517671 BTAF1O14981 1849 aa10.85□□□□□ -0.67
NPM1-204ENST00000517671 USP54Q70EL1 1684 aa10.85□□□□□ -0.67
NPM1-204ENST00000517671 ATG7O95352 703 aa10.84□□□□□ -0.67
NPM1-204ENST00000517671 KCNQ4P56696 695 aa10.84□□□□□ -0.67
NPM1-204ENST00000517671 TGFB2P61812 414 aa10.84□□□□□ -0.67
NPM1-204ENST00000517671 NBPF6Q5VWK0 638 aa10.84□□□□□ -0.67
NPM1-204ENST00000517671 RIPOR1Q6ZS17 1223 aa10.84□□□□□ -0.67
NPM1-204ENST00000517671 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms