RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 NAP1L1P55209 391 aaKnown RBP7.63□□□□□ -1.19
CPNE3-203ENST00000517490 CABP4P57796 275 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 IL17REQ8NFR9 667 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 DCAF8L1A6NGE4 600 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 HAND2P61296 217 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 TFCP2Q12800 502 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 BRD3Q15059 726 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 CCDC181Q5TID7 509 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 NUP88Q99567 741 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-203ENST00000517490 DDX21Q9NR30 783 aaKnown RBP eCLIP7.63□□□□□ -1.19
CPNE3-203ENST00000517490 SLC12A7Q9Y666 1083 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 ZC3H13Q5T200 1668 aaKnown RBP7.63□□□□□ -1.19
CPNE3-203ENST00000517490 VWDEQ8N2E2 1590 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 DIP2BQ9P265 1576 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 ARHGEF40Q8TER5 1519 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 ZSCAN26Q16670 478 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 KMT5BQ4FZB7 885 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 TNNI3KQ59H18 835 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 CNKSR2Q8WXI2 1034 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 EAF2Q96CJ1 260 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-203ENST00000517490 SUCLG2Q96I99 432 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 RSPH14Q9UHP6 348 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 PHF8Q9UPP1 1060 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 FPGT-TNNI3KV9GXZ4 949 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 HECW2Q9P2P5 1572 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 CLSTN1O94985 981 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 CHMP4BP1P59074 171 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 KARSQ15046 597 aaKnown RBP7.62□□□□□ -1.19
CPNE3-203ENST00000517490 TTC31Q49AM3 519 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-203ENST00000517490 CCDC129Q6ZRS4 1044 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 NUTM2AQ8IVF1 878 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-203ENST00000517490 EHBP1Q8NDI1 1231 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 ZNF274Q96GC6 653 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-203ENST00000517490 IGSF1Q8N6C5 1336 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 KDRP35968 1356 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 TNRQ92752 1358 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 DEPDC5O75140 1603 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 A0A1B0GUL7 405 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 TAF5LO75529 589 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 IL15P40933 162 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-203ENST00000517490 FUCA2Q9BTY2 467 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 ALDH8A1Q9H2A2 487 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-203ENST00000517490 CNNM1Q9NRU3 951 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 AKR1B15C9JRZ8 316 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-203ENST00000517490 CLCN6P51797 869 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 CKAP4Q07065 602 aaKnown RBP7.62□□□□□ -1.19
CPNE3-203ENST00000517490 CCDC144BQ3MJ40 725 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 CCDC144CPQ8IYA2 1237 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 KBTBD3Q8NAB2 608 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 NUP133Q8WUM0 1156 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 AIDAQ96BJ3 306 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 DSCC1Q9BVC3 393 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 NCOA5Q9HCD5 579 aaKnown RBP7.62□□□□□ -1.19
CPNE3-203ENST00000517490 RAI14Q9P0K7 980 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 SPAG1Q07617 926 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 COPS6Q7L5N1 327 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 STK11IPQ8N1F8 1099 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 RTEL1Q9NZ71 1219 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 PCDHA7Q9UN72 937 aa7.62□□□□□ -1.19
CPNE3-203ENST00000517490 IRX3P78415 501 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 RAB11FIP4Q86YS3 637 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 CTCFLQ8NI51 663 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 PGBD1Q96JS3 809 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 PYM1Q9BRP8 204 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 UBAC1Q9BSL1 405 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 PUF60Q9UHX1 559 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 PTPRMP28827 1452 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 GOLGA6L10A6NI86 522 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 IKBKBO14920 756 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 ZBTB43O43298 467 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 EIF5P55010 431 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 SCRN1Q12765 414 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 ZNF569Q5MCW4 686 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 KIF6Q6ZMV9 814 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 CHST3Q7LGC8 479 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 MICU3Q86XE3 530 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 SYTL4Q96C24 671 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 OSBPL5Q9H0X9 879 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 LUC7LQ9NQ29 371 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 LZTFL1Q9NQ48 299 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 ERCC6L2Q5T890 1561 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 RNMTO43148 476 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 IDH1O75874 414 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 PNMA6AP0CW24 399 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 CMA1P23946 247 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 NAA30Q147X3 362 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 HSP90AA4PQ58FG1 418 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 CNGA4Q8IV77 575 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 GOLGA5Q8TBA6 731 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 RABGGTAQ92696 567 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 PPP2R2CQ9Y2T4 447 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 ADCY9O60503 1353 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 FRMPD1Q5SYB0 1578 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 IFIT3O14879 490 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 N4BP3O15049 544 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 CUTAO60888 179 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 SNRPA1P09661 255 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 TMEM67Q5HYA8 995 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms