RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ZBTB42B2RXF5 422 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 FBXO24O75426 580 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 SSBP05455 408 aaKnown RBP eCLIP5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 NCLP19338 710 aaKnown RBP5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 TFE3P19532 575 aaPredicted RBP5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 CD33P20138 364 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 SIK1P57059 783 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 MPP2Q14168 576 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 SDE2Q6IQ49 451 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 TPTE2Q6XPS3 522 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 CACTIN-AS1Q8N1I8 211 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 NLGN1Q8N2Q7 840 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 NANOS1Q8WY41 292 aaKnown RBP5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 BSNDQ8WZ55 320 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 NSUN5Q96P11 429 aaKnown RBP5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 ADAM19Q9H013 955 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 TMEM39AQ9NV64 488 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 SIRPGQ9P1W8 387 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 EFR3BQ9Y2G0 817 aa5.01□□□□□ -1.61
RNU6-840P-201ENST00000517275 FAM221AA4D161 298 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 ADARB2-AS1A8MUL3 147 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 ENPP3O14638 875 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 PF4P02776 101 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 CRKP46108 304 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 RAB33AQ14088 237 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 SPRED3Q2MJR0 410 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 TNNI3KQ59H18 835 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 SNAP47Q5SQN1 464 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 REXO1Q8N1G1 1221 aaKnown RBP5□□□□□ -1.61
RNU6-840P-201ENST00000517275 OR6P1Q8NGX9 317 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 GATAD2BQ8WXI9 593 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 TTC9Q92623 222 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 GAL3ST3Q96A11 431 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 SHDQ96IW2 340 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 HHIPQ96QV1 700 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 RBSNQ9H1K0 784 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 RASSF4Q9H2L5 321 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 ZSWIM4Q9H7M6 989 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 CACNA2D2Q9NY47 1150 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 PRKAG3Q9UGI9 489 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 CYP8B1Q9UNU6 501 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 MSRB2Q9Y3D2 182 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 SAMM50Q9Y512 469 aa5□□□□□ -1.61
RNU6-840P-201ENST00000517275 METTL12A8MUP2 240 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 EIF4EBP3O60516 100 aaPredicted RBP4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 CILPO75339 1184 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 PAGE1O75459 146 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 SMNDC1O75940 238 aaKnown RBP eCLIP4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 NME2P22392 152 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 ATP11AP98196 1134 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 PPP2R3AQ06190 1150 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 APOBRQ0VD83 1088 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 RASA3Q14644 834 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 EGFLAMQ63HQ2 1017 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 VN1R5Q7Z5H4 357 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 JAZF1Q86VZ6 243 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 GOLM1Q8NBJ4 401 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 RBBP8NLQ8NC74 664 aaPredicted RBP4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 PMFBP1Q8TBY8 1022 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 TRERF1Q96PN7 1200 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 SOX17Q9H6I2 414 aaPredicted RBP4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 DNAJB12Q9NXW2 375 aaKnown RBP4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 UBP1Q9NZI7 540 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 CDK11AQ9UQ88 783 aaPredicted RBP4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 TLR6Q9Y2C9 796 aa4.99□□□□□ -1.61
RNU6-840P-201ENST00000517275 SOBPA7XYQ1 873 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 MINDY4BA8MYZ0 360 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 K7ELQ4 463 aaPredicted RBP4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 ST8SIA5O15466 376 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 GHRHP01286 108 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 ARAFP10398 606 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 IMPDH2P12268 514 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 BMP6P22004 513 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 GIPRP48546 466 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 FAM160A1Q05DH4 1040 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 PCDH1Q08174 1060 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 ZNF252P-AS1Q0IIN9 211 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 LRRC14Q15048 493 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 REC114Q7Z4M0 266 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 RAB44Q7Z6P3 723 aaPredicted RBP4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 NKD1Q969G9 470 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 GTPBP3Q969Y2 492 aaKnown RBP4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 POP1Q99575 1024 aaKnown RBP4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 SRRTQ9BXP5 876 aaKnown RBP4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 MUC3BQ9H195 1237 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 GPN3Q9UHW5 284 aaPredicted RBP4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 NAGPAQ9UK23 515 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 ZNRF3Q9ULT6 936 aa4.98□□□□□ -1.61
RNU6-840P-201ENST00000517275 GFRA3O60609 400 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 TRPA1O75762 1119 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 F13A1P00488 732 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 PTPRAP18433 802 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 HSD3B2P26439 372 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 ETFBP38117 255 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 MAP3K11Q16584 847 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 CWF19L2Q2TBE0 894 aaKnown RBP4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 FOXR1Q6PIV2 292 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 ANKS3Q6ZW76 656 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 SYT9Q86SS6 491 aa4.97□□□□□ -1.61
RNU6-840P-201ENST00000517275 PDZD3Q86UT5 571 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms