RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SOX18P35713 384 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 PLAURQ03405 335 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 TNP2Q05952 138 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 SPEM2Q0P670 501 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 RASIP1Q5U651 963 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 FIGNL1Q6PIW4 674 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 AGMOQ6ZNB7 445 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 DHX32Q7L7V1 743 aaKnown RBP4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 SLITRK4Q8IW52 837 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 FAM169BQ8N8A8 192 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 CEP120Q8N960 986 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 PLD4Q96BZ4 506 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 SLC30A3Q99726 388 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 BHLHE41Q9C0J9 482 aaPredicted RBP4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ZNF576Q9H609 170 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 CWC22Q9HCG8 908 aaKnown RBP4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 PCDHGC4Q9Y5F7 938 aa4.69□□□□□ -1.66
SCARNA15.2-201ENST00000516409 CD33P20138 364 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 MCM4P33991 863 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 IGBP1P78318 339 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ATP11AP98196 1134 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 MLLT1Q03111 559 aaPredicted RBP4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 SEPT6Q14141 434 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 UBAP2LQ14157 1087 aaKnown RBP4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 FBXW10Q5XX13 1052 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 KANK3Q6NY19 840 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 HFE2Q6ZVN8 426 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 TRIM42Q8IWZ5 723 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 JARID2Q92833 1246 aaPredicted RBP4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 KCNB2Q92953 911 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 NXPE3Q969Y0 559 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ZFP42Q96MM3 310 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 CHMP4AQ9BY43 222 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 NUCKS1Q9H1E3 243 aaKnown RBP4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 RASSF4Q9H2L5 321 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ZFYVE1Q9HBF4 777 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ST7Q9NRC1 585 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 PLA2G2EQ9NZK7 142 aa4.68□□□□□ -1.66
SCARNA15.2-201ENST00000516409 FAM187AA6NFU0 413 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 SOBPA7XYQ1 873 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 J3QW42 95 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 PDE2AO00408 941 aaPredicted RBP4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 BNIP3LO60238 219 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 HOXD8P13378 290 aaPredicted RBP4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 LMNB1P20700 586 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 EIF6P56537 245 aaKnown RBP4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 RPS26P62854 115 aaKnown RBP4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 LBRQ14739 615 aaKnown RBP4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 TNNI3KQ59H18 835 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 RNF187Q5TA31 235 aaPredicted RBP4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 FILIP1Q7Z7B0 1213 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 LILRB2Q8N423 598 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 TMEM102Q8N9M5 508 aaPredicted RBP4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 SH3TC2Q8TF17 1288 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ABHD17AQ96GS6 310 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 FERD3LQ96RJ6 166 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 DNAJC7Q99615 494 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 MUC3BQ9H195 1237 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 MIR1-1HGQ9H1L0 117 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 FANCLQ9NW38 375 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ACTR10Q9NZ32 417 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 MARK1Q9P0L2 795 aa4.67□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ESYT3A0FGR9 886 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 ZBTB42B2RXF5 422 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 MARCH6O60337 910 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 TRIM37O94972 964 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 MAP3K6O95382 1288 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 IBSPP21815 317 aaPredicted RBP4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 GIPRP48546 466 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 NRLP54845 237 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 CHMP4BP1P59074 171 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 LAMC2Q13753 1193 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 DDR2Q16832 855 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 GK5Q6ZS86 529 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 MICAL1Q8TDZ2 1067 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 GATAD2BQ8WXI9 593 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 LRRC3Q9BY71 257 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 IGFLR1Q9H665 355 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 BRMS1Q9HCU9 246 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 TMEM39AQ9NV64 488 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 IFT57Q9NWB7 429 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 MSRB2Q9Y3D2 182 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 COL4A3BPQ9Y5P4 624 aa4.66□□□□□ -1.66
SCARNA15.2-201ENST00000516409 LOC102724428A0A0B4J2F2 783 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 FAM221AA4D161 298 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 CDC45O75419 566 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 BMP6P22004 513 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 ZNF165P49910 485 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 SIK1P57059 783 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 ANAPC15P60006 121 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 GPLD1P80108 840 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 CLCQ05315 142 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 TBC1D8BQ0IIM8 1120 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 IFRD2Q12894 506 aaPredicted RBP4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 MPP2Q14168 576 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 DBN1Q16643 649 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 CWF19L2Q2TBE0 894 aaKnown RBP4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 PLEKHG4Q58EX7 1191 aa4.65□□□□□ -1.67
SCARNA15.2-201ENST00000516409 RPS26P11Q5JNZ5 115 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms