RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SLC22A31A6NKX4 558 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 OPLAHO14841 1288 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 FSCN2O14926 492 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 TIAF1O95411 115 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 ZNF20P17024 532 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 GDF10P55107 478 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 DIXDC1Q155Q3 683 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 TUSC1Q2TAM9 212 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 SH3PXD2AQ5TCZ1 1133 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 CYFIP1Q7L576 1253 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 GPIHBP1Q8IV16 184 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 TMEM151BQ8IW70 566 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 MCOLN1Q9GZU1 580 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 GCM1Q9NP62 436 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 SMPD4Q9NXE4 827 aa1.19□□□□□ -2.22
RNU6-542P-201ENST00000516405 LTBP3Q9NS15 1303 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 IRS2Q9Y4H2 1338 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 A6NJY4 79 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 DRD2P14416 443 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 TARSP26639 723 aaKnown RBP1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 CDC25BP30305 580 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 TSGA10IPQ3SY00 556 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 OGFOD3Q6PK18 319 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 C12orf50Q8NA57 414 aaPredicted RBP1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 RHPN1Q8TCX5 695 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 SH3RF3Q8TEJ3 882 aaPredicted RBP1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 DACT3Q96B18 629 aaPredicted RBP1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 ZNF747Q9BV97 191 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 RUSC1Q9BVN2 902 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 MUC3BQ9H195 1237 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 SERTAD1Q9UHV2 236 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 HS3ST3A1Q9Y663 406 aa1.18□□□□□ -2.22
RNU6-542P-201ENST00000516405 MYOCOSA0A1B0GUC4 107 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 NOS2P35228 1153 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 TGFB2P61812 414 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 ZP2Q05996 745 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 ZFYVE27Q5T4F4 411 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 USP51Q70EK9 711 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 KRT25Q7Z3Z0 450 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 BTLAQ7Z6A9 289 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 SP8Q8IXZ3 490 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 KLHL23Q8NBE8 558 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 IFT43Q96FT9 208 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 HRASLS5Q96KN8 279 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 SUSD3Q96L08 255 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 HHIPQ96QV1 700 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 KRTAP1-5Q9BYS1 174 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 C1GALT1Q9NS00 363 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 PLAGL2Q9UPG8 496 aa1.17□□□□□ -2.22
RNU6-542P-201ENST00000516405 LOC102724428A0A0B4J2F2 783 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 TMEM229AB2RXF0 380 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 DYNC1LI2O43237 492 aaPredicted RBP1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 NFICP08651 508 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 FBXO45P0C2W1 286 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 PI3P19957 117 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 USP11P51784 963 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 NRLP54845 237 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 SIK1P57059 783 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 TEAD4Q15561 434 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 SEZ6L2Q6UXD5 910 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 C2CD4AQ8NCU7 369 aaPredicted RBP1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 SHISA4Q96DD7 197 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 SGPP1Q9BX95 441 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 TMPRSS13Q9BYE2 586 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 HMX1Q9NP08 348 aaPredicted RBP1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 LUC7LQ9NQ29 371 aaKnown RBP1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 ANKIB1Q9P2G1 1089 aa1.16□□□□□ -2.22
RNU6-542P-201ENST00000516405 ZBBXA8MT70 800 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 CILPO75339 1184 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 KRT10P13645 584 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 AFF3P51826 1226 aaKnown RBP1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 NLRP12P59046 1061 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 GPR162Q16538 588 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 IFI16Q16666 785 aaKnown RBP1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 MYSM1Q5VVJ2 828 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 FBXO31Q5XUX0 539 aaPredicted RBP1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 DPY19L2P1Q6NXN4 242 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 FERMT3Q86UX7 667 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 DNAJC10Q8IXB1 793 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 SMG8Q8ND04 991 aaKnown RBP1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 CHFRQ96EP1 664 aa1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 EPB41L4AQ9HCS5 686 aaPredicted RBP1.15□□□□□ -2.23
RNU6-542P-201ENST00000516405 PROB1E7EW31 1015 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 RFXAPO00287 272 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 SASH3O75995 380 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 DLGAP3O95886 979 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 POU3F3P20264 500 aaPredicted RBP1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 GDNFP39905 211 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 PURAQ00577 322 aaKnown RBP1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 FHL2Q14192 279 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 KRTAP15-1Q3LI76 137 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 TIGD5Q53EQ6 642 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 NUTM2GQ5VZR2 741 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 SMYD5Q6GMV2 418 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 CACTIN-AS1Q8N1I8 211 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 C8orf49Q96NF6 230 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 RBM15Q96T37 977 aaKnown RBP eCLIP1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 LACRTQ9GZZ8 138 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 IKZF4Q9H2S9 585 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 SUGCTQ9HAC7 445 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms