RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 TCRBV5S4A2TA0A5A2 114 aa18.37■□□□□ 0.53
THUMPD3-210ENST00000515662 HMGB1P09429 215 aaKnown RBP18.37■□□□□ 0.53
THUMPD3-210ENST00000515662 SMC3Q9UQE7 1217 aa18.37■□□□□ 0.53
THUMPD3-210ENST00000515662 ZNF532Q9HCE3 1301 aa18.37■□□□□ 0.53
THUMPD3-210ENST00000515662 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
THUMPD3-210ENST00000515662 DOCK2Q92608 1830 aa18.36■□□□□ 0.53
THUMPD3-210ENST00000515662 EP400Q96L91 3159 aa18.36■□□□□ 0.53
THUMPD3-210ENST00000515662 WTIPA6NIX2 430 aaPredicted RBP18.36■□□□□ 0.53
THUMPD3-210ENST00000515662 E7EWF7 191 aa18.36■□□□□ 0.53
THUMPD3-210ENST00000515662 TM4SF1P30408 202 aa18.36■□□□□ 0.53
THUMPD3-210ENST00000515662 RBM6P78332 1123 aaKnown RBP18.36■□□□□ 0.53
THUMPD3-210ENST00000515662 ZNF804BA4D1E1 1349 aa18.36■□□□□ 0.53
THUMPD3-210ENST00000515662 TNRC6CQ9HCJ0 1690 aaKnown RBP18.36■□□□□ 0.53
THUMPD3-210ENST00000515662 FGAP02671 866 aa18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 FOXD4L5Q5VV16 416 aaPredicted RBP18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 ZNF772Q68DY9 489 aaPredicted RBP18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 FOXD4L4Q8WXT5 416 aaPredicted RBP18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 NPHP1O15259 732 aa18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 MAP3K12Q12852 859 aa18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 Q6ZUG5 572 aa18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 DHX32Q7L7V1 743 aaKnown RBP18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 ANO8Q9HCE9 1232 aaPredicted RBP18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 WDR33Q9C0J8 1336 aaKnown RBP18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 LAMA4Q16363 1823 aa18.35■□□□□ 0.53
THUMPD3-210ENST00000515662 SKOR2Q2VWA4 1001 aaPredicted RBP18.34■□□□□ 0.53
THUMPD3-210ENST00000515662 GYS1P13807 737 aa18.34■□□□□ 0.53
THUMPD3-210ENST00000515662 GYG1P46976 350 aa18.34■□□□□ 0.53
THUMPD3-210ENST00000515662 IMMTQ16891 758 aaKnown RBP18.34■□□□□ 0.53
THUMPD3-210ENST00000515662 CNBD1Q8NA66 436 aa18.34■□□□□ 0.53
THUMPD3-210ENST00000515662 GJB2P29033 226 aa18.33■□□□□ 0.53
THUMPD3-210ENST00000515662 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.53
THUMPD3-210ENST00000515662 PROM2Q8N271 834 aa18.33■□□□□ 0.53
THUMPD3-210ENST00000515662 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.53
THUMPD3-210ENST00000515662 GNL3LQ9NVN8 582 aaKnown RBP18.33■□□□□ 0.52
THUMPD3-210ENST00000515662 SYT1P21579 422 aa18.32■□□□□ 0.52
THUMPD3-210ENST00000515662 TXNRD1Q16881 649 aa18.32■□□□□ 0.52
THUMPD3-210ENST00000515662 ANKRD2Q9GZV1 360 aa18.32■□□□□ 0.52
THUMPD3-210ENST00000515662 HAND2P61296 217 aa18.32■□□□□ 0.52
THUMPD3-210ENST00000515662 CAVIN4Q5BKX8 364 aa18.32■□□□□ 0.52
THUMPD3-210ENST00000515662 CHAMP1Q96JM3 812 aa18.32■□□□□ 0.52
THUMPD3-210ENST00000515662 STRBPQ96SI9 672 aaKnown RBP18.32■□□□□ 0.52
THUMPD3-210ENST00000515662 LRRC2Q9BYS8 371 aa18.32■□□□□ 0.52
THUMPD3-210ENST00000515662 IQSEC3Q9UPP2 1182 aaPredicted RBP18.32■□□□□ 0.52
THUMPD3-210ENST00000515662 FAM84BQ96KN1 310 aaPredicted RBP18.31■□□□□ 0.52
THUMPD3-210ENST00000515662 LMBRD1Q9NUN5 540 aa18.31■□□□□ 0.52
THUMPD3-210ENST00000515662 STX6O43752 255 aa18.31■□□□□ 0.52
THUMPD3-210ENST00000515662 PRR5LQ6MZQ0 368 aa18.31■□□□□ 0.52
THUMPD3-210ENST00000515662 BRF1Q92994 677 aa18.31■□□□□ 0.52
THUMPD3-210ENST00000515662 AIDAQ96BJ3 306 aa18.31■□□□□ 0.52
THUMPD3-210ENST00000515662 AGXT2Q9BYV1 514 aa18.31■□□□□ 0.52
THUMPD3-210ENST00000515662 GZF1Q9H116 711 aaPredicted RBP18.31■□□□□ 0.52
THUMPD3-210ENST00000515662 COL1A1P02452 1464 aaPredicted RBP18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 ZNF213O14771 459 aa18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 DTNBO60941 627 aa18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 FGD1P98174 961 aa18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 FBXO33Q7Z6M2 555 aa18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 ZSCAN22P10073 491 aaPredicted RBP18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 STK3Q13188 491 aa18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 GTF3C6Q969F1 213 aa18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 LRP2BPQ9P2M1 347 aa18.3■□□□□ 0.52
THUMPD3-210ENST00000515662 KLRK1P26718 216 aa18.29■□□□□ 0.52
THUMPD3-210ENST00000515662 VPS37DQ86XT2 251 aa18.29■□□□□ 0.52
THUMPD3-210ENST00000515662 MBD4O95243 580 aa18.28■□□□□ 0.52
THUMPD3-210ENST00000515662 GRAPQ13588 217 aa18.28■□□□□ 0.52
THUMPD3-210ENST00000515662 GRAPLQ8TC17 118 aaPredicted RBP18.28■□□□□ 0.52
THUMPD3-210ENST00000515662 APPP05067 770 aa18.28■□□□□ 0.52
THUMPD3-210ENST00000515662 SERPINB2P05120 415 aa18.28■□□□□ 0.52
THUMPD3-210ENST00000515662 ALX1Q15699 326 aa18.28■□□□□ 0.52
THUMPD3-210ENST00000515662 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
THUMPD3-210ENST00000515662 DENND2AQ9ULE3 1009 aa18.28■□□□□ 0.52
THUMPD3-210ENST00000515662 PRPF40AO75400 957 aaKnown RBP18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 NBPF3Q9H094 633 aa18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 PATL2C9JE40 543 aaKnown RBP18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 SEMA3EO15041 775 aa18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 PLSCR1O15162 318 aa18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 KLHL40Q2TBA0 621 aa18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 CHST3Q7LGC8 479 aa18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 ARMT1Q9H993 441 aa18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 MTMR6Q9Y217 621 aa18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.52
THUMPD3-210ENST00000515662 ZMYM6O95789 1325 aa18.27■□□□□ 0.51
THUMPD3-210ENST00000515662 PFKFB2O60825 505 aa18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 ST5P78524 1137 aa18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 APOBRQ0VD83 1088 aa18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 MB21D2Q8IYB1 491 aaPredicted RBP18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 PNPLA7Q6ZV29 1317 aa18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 DDR1Q08345 913 aa18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 CRY2Q49AN0 593 aa18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 NCOA7Q8NI08 942 aa18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 ABCF2Q9UG63 623 aa18.26■□□□□ 0.51
THUMPD3-210ENST00000515662 F13A1P00488 732 aa18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 HIBADHP31937 336 aaKnown RBP18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 MCM5P33992 734 aa18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 LCORLQ8N3X6 602 aa18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 EPB41L4AQ9HCS5 686 aaPredicted RBP18.25■□□□□ 0.51
THUMPD3-210ENST00000515662 PDS5AQ29RF7 1337 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms