RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 UFL1O94874 794 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 GYG1P46976 350 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 ANKRD1Q15327 319 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 TSGA10IPQ3SY00 556 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 MSL1Q68DK7 614 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 MPNDQ8N594 471 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 ZNF622Q969S3 477 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPM3-222ENST00000515609 AIDAQ96BJ3 306 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 EDC3Q96F86 508 aaKnown RBP11.33□□□□□ -0.6
TPM3-222ENST00000515609 NOL10Q9BSC4 688 aaKnown RBP11.33□□□□□ -0.6
TPM3-222ENST00000515609 ZC3H12CQ9C0D7 883 aaKnown RBP11.33□□□□□ -0.6
TPM3-222ENST00000515609 RBM8AQ9Y5S9 174 aaKnown RBP11.33□□□□□ -0.6
TPM3-222ENST00000515609 CYP46A1Q9Y6A2 500 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 CASZ1Q86V15 1759 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
TPM3-222ENST00000515609 SALL1Q9NSC2 1324 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 K7ELQ4 463 aaPredicted RBP11.32□□□□□ -0.6
TPM3-222ENST00000515609 LDHCP07864 332 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 PDE6AP16499 860 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 NEK4P51957 841 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 SCARF1Q14162 830 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 NECTIN1Q15223 517 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 IMMTQ16891 758 aaKnown RBP11.32□□□□□ -0.6
TPM3-222ENST00000515609 DPP8Q6V1X1 898 aaPredicted RBP11.32□□□□□ -0.6
TPM3-222ENST00000515609 KCNB2Q92953 911 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 MTFR1LQ9H019 292 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 ANTXR1Q9H6X2 564 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 RAI14Q9P0K7 980 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 ABCF2Q9UG63 623 aa11.32□□□□□ -0.6
TPM3-222ENST00000515609 GPSM2P81274 684 aa11.31□□□□□ -0.6
TPM3-222ENST00000515609 CREB3L3Q68CJ9 461 aa11.31□□□□□ -0.6
TPM3-222ENST00000515609 KIF2CQ99661 725 aa11.31□□□□□ -0.6
TPM3-222ENST00000515609 TBC1D2Q9BYX2 928 aa11.31□□□□□ -0.6
TPM3-222ENST00000515609 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
TPM3-222ENST00000515609 MAST3O60307 1309 aa11.31□□□□□ -0.6
TPM3-222ENST00000515609 ZNF532Q9HCE3 1301 aa11.31□□□□□ -0.6
TPM3-222ENST00000515609 PDIA4P13667 645 aaKnown RBP11.3□□□□□ -0.6
TPM3-222ENST00000515609 NT5C2P49902 561 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 TGFB2P61812 414 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
TPM3-222ENST00000515609 PRPF40BQ6NWY9 871 aaKnown RBP11.3□□□□□ -0.6
TPM3-222ENST00000515609 BLOC1S2Q6QNY1 142 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
TPM3-222ENST00000515609 RTKN2Q8IZC4 609 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 MAGEB6Q8N7X4 407 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 TDRD7Q8NHU6 1098 aaKnown RBP11.3□□□□□ -0.6
TPM3-222ENST00000515609 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 PIH1D3Q9NQM4 214 aaKnown RBP11.3□□□□□ -0.6
TPM3-222ENST00000515609 SNX14Q9Y5W7 946 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 NDUFB9Q9Y6M9 179 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 ZMYM6O95789 1325 aa11.3□□□□□ -0.6
TPM3-222ENST00000515609 SLC27A2O14975 620 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 GPAA1O43292 621 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 BAG3O95817 575 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 APPP05067 770 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
TPM3-222ENST00000515609 HSPD1P10809 573 aaKnown RBP11.29□□□□□ -0.6
TPM3-222ENST00000515609 IL1R1P14778 569 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 PLCG2P16885 1265 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 CYP7A1P22680 504 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 PTH1RQ03431 593 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 TRDNQ13061 729 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 ALX1Q15699 326 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 VPS53Q5VIR6 699 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 PI16Q6UXB8 463 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 TTLL6Q8N841 843 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 OSBP2Q969R2 916 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
TPM3-222ENST00000515609 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
TPM3-222ENST00000515609 AKAP11Q9UKA4 1901 aa11.29□□□□□ -0.6
TPM3-222ENST00000515609 A0A1B0GUL6 1792 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 PATL2C9JE40 543 aaKnown RBP11.28□□□□□ -0.6
TPM3-222ENST00000515609 SNAP23O00161 211 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 ZNF213O14771 459 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 RUFY3Q7L099 469 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 PODNQ7Z5L7 613 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 ZNF589Q86UQ0 364 aaPredicted RBP11.28□□□□□ -0.6
TPM3-222ENST00000515609 AMOTL1Q8IY63 956 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 JAKMIP1Q96N16 626 aaKnown RBP11.28□□□□□ -0.6
TPM3-222ENST00000515609 ALDH8A1Q9H2A2 487 aaPredicted RBP11.28□□□□□ -0.6
TPM3-222ENST00000515609 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
TPM3-222ENST00000515609 MYH7P12883 1935 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 LRRC37AA6NMS7 1700 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 EP400Q96L91 3159 aa11.28□□□□□ -0.6
TPM3-222ENST00000515609 ANKRD31Q8N7Z5 1873 aa11.27□□□□□ -0.6
TPM3-222ENST00000515609 TCRBV5S4A2TA0A5A2 114 aa11.27□□□□□ -0.61
TPM3-222ENST00000515609 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
TPM3-222ENST00000515609 CASTP20810 708 aaKnown RBP11.27□□□□□ -0.61
TPM3-222ENST00000515609 FGD1P98174 961 aa11.27□□□□□ -0.61
TPM3-222ENST00000515609 CHAF1AQ13111 956 aaPredicted RBP11.27□□□□□ -0.61
TPM3-222ENST00000515609 RALYLQ86SE5 291 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms