RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 CIAPIN1Q6FI81 312 aa18.52■□□□□ 0.56
PDCD6-211ENST00000515587 FBXO33Q7Z6M2 555 aa18.52■□□□□ 0.56
PDCD6-211ENST00000515587 FBXW7Q969H0 707 aa18.52■□□□□ 0.56
PDCD6-211ENST00000515587 XAGE2Q96GT9 111 aa18.52■□□□□ 0.56
PDCD6-211ENST00000515587 BCL11AQ9H165 835 aa18.52■□□□□ 0.56
PDCD6-211ENST00000515587 SCN9AQ15858 1988 aa18.51■□□□□ 0.55
PDCD6-211ENST00000515587 ZNF541Q9H0D2 1346 aa18.51■□□□□ 0.55
PDCD6-211ENST00000515587 YDJCA8MPS7 323 aa18.51■□□□□ 0.55
PDCD6-211ENST00000515587 RAD17O75943 681 aa18.51■□□□□ 0.55
PDCD6-211ENST00000515587 IL1R1P14778 569 aa18.51■□□□□ 0.55
PDCD6-211ENST00000515587 BCAMP50895 628 aa18.51■□□□□ 0.55
PDCD6-211ENST00000515587 AACSQ86V21 672 aa18.51■□□□□ 0.55
PDCD6-211ENST00000515587 GJA3Q9Y6H8 435 aa18.51■□□□□ 0.55
PDCD6-211ENST00000515587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.51■□□□□ 0.55
PDCD6-211ENST00000515587 PASKQ96RG2 1323 aa18.5■□□□□ 0.55
PDCD6-211ENST00000515587 USP17L3A6NCW0 530 aa18.5■□□□□ 0.55
PDCD6-211ENST00000515587 USP17L4A6NCW7 530 aa18.5■□□□□ 0.55
PDCD6-211ENST00000515587 IFIT2P09913 472 aaKnown RBP18.5■□□□□ 0.55
PDCD6-211ENST00000515587 ADORA1P30542 326 aa18.5■□□□□ 0.55
PDCD6-211ENST00000515587 RGS19P49795 217 aa18.5■□□□□ 0.55
PDCD6-211ENST00000515587 CXCL9Q07325 125 aa18.5■□□□□ 0.55
PDCD6-211ENST00000515587 CCDC158Q5M9N0 1113 aa18.5■□□□□ 0.55
PDCD6-211ENST00000515587 USP17L1Q7RTZ2 530 aa18.5■□□□□ 0.55
PDCD6-211ENST00000515587 GPC2Q8N158 579 aa18.5■□□□□ 0.55
PDCD6-211ENST00000515587 ERICH6BQ5W0A0 696 aa18.49■□□□□ 0.55
PDCD6-211ENST00000515587 CCDC102BQ68D86 513 aa18.49■□□□□ 0.55
PDCD6-211ENST00000515587 TDRD7Q8NHU6 1098 aaKnown RBP18.49■□□□□ 0.55
PDCD6-211ENST00000515587 EAF2Q96CJ1 260 aaPredicted RBP18.49■□□□□ 0.55
PDCD6-211ENST00000515587 CCDC8Q9H0W5 538 aaPredicted RBP18.49■□□□□ 0.55
PDCD6-211ENST00000515587 SEMA3EO15041 775 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 IGHDP01880 384 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 UQCRFS1P1P0C7P4 283 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 PHKA1P46020 1223 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 GTF2IP78347 998 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 TTC39AQ5SRH9 613 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 ANKRD45Q5TZF3 282 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 STRIP1Q5VSL9 837 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 TTLL5Q6EMB2 1281 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 KCNQ5Q9NR82 932 aa18.48■□□□□ 0.55
PDCD6-211ENST00000515587 IQSEC3Q9UPP2 1182 aaPredicted RBP18.48■□□□□ 0.55
PDCD6-211ENST00000515587 PSMD14O00487 310 aa18.47■□□□□ 0.55
PDCD6-211ENST00000515587 SMARCA5O60264 1052 aaPredicted RBP18.47■□□□□ 0.55
PDCD6-211ENST00000515587 DDNO94850 711 aaPredicted RBP18.47■□□□□ 0.55
PDCD6-211ENST00000515587 VIL1P09327 827 aaKnown RBP18.46■□□□□ 0.55
PDCD6-211ENST00000515587 CHAF1AQ13111 956 aaPredicted RBP18.46■□□□□ 0.55
PDCD6-211ENST00000515587 SMC5Q8IY18 1101 aa18.46■□□□□ 0.55
PDCD6-211ENST00000515587 DBNLQ9UJU6 430 aaKnown RBP18.46■□□□□ 0.55
PDCD6-211ENST00000515587 DENND2AQ9ULE3 1009 aa18.46■□□□□ 0.55
PDCD6-211ENST00000515587 FAM205AQ6ZU69 1335 aa18.46■□□□□ 0.55
PDCD6-211ENST00000515587 MYO3BQ8WXR4 1341 aa18.46■□□□□ 0.55
PDCD6-211ENST00000515587 ZNF646O15015 1829 aaPredicted RBP18.45■□□□□ 0.54
PDCD6-211ENST00000515587 TMEM88BA6NKF7 163 aa18.45■□□□□ 0.54
PDCD6-211ENST00000515587 RPS12P25398 132 aaKnown RBP18.45■□□□□ 0.54
PDCD6-211ENST00000515587 LMOD1P29536 600 aaPredicted RBP18.45■□□□□ 0.54
PDCD6-211ENST00000515587 RSBN1LQ6PCB5 846 aaPredicted RBP18.45■□□□□ 0.54
PDCD6-211ENST00000515587 TBC1D22AQ8WUA7 517 aa18.45■□□□□ 0.54
PDCD6-211ENST00000515587 GPATCH3Q96I76 525 aa18.45■□□□□ 0.54
PDCD6-211ENST00000515587 TLR7Q9NYK1 1049 aaKnown RBP18.45■□□□□ 0.54
PDCD6-211ENST00000515587 SCN4AP35499 1836 aa18.44■□□□□ 0.54
PDCD6-211ENST00000515587 GMPSP49915 693 aaPredicted RBP18.44■□□□□ 0.54
PDCD6-211ENST00000515587 DACT2Q5SW24 774 aa18.44■□□□□ 0.54
PDCD6-211ENST00000515587 B4GALNT3Q6L9W6 998 aa18.44■□□□□ 0.54
PDCD6-211ENST00000515587 WDR66Q8TBY9 1149 aa18.44■□□□□ 0.54
PDCD6-211ENST00000515587 CCDC136Q96JN2 1154 aa18.44■□□□□ 0.54
PDCD6-211ENST00000515587 IQCA1LA6NCM1 817 aa18.43■□□□□ 0.54
PDCD6-211ENST00000515587 ZBTB22O15209 634 aa18.43■□□□□ 0.54
PDCD6-211ENST00000515587 ITGBL1O95965 494 aaPredicted RBP18.43■□□□□ 0.54
PDCD6-211ENST00000515587 ARID4AP29374 1257 aaPredicted RBP18.43■□□□□ 0.54
PDCD6-211ENST00000515587 FKBP1AP62942 108 aaKnown RBP18.43■□□□□ 0.54
PDCD6-211ENST00000515587 AGBL3Q8NEM8 1001 aa18.43■□□□□ 0.54
PDCD6-211ENST00000515587 L3MBTL3Q96JM7 780 aaPredicted RBP18.43■□□□□ 0.54
PDCD6-211ENST00000515587 ZNF512BQ96KM6 892 aaPredicted RBP18.43■□□□□ 0.54
PDCD6-211ENST00000515587 JAG2Q9Y219 1238 aa18.43■□□□□ 0.54
PDCD6-211ENST00000515587 PDS5AQ29RF7 1337 aaKnown RBP18.43■□□□□ 0.54
PDCD6-211ENST00000515587 RASGRF1Q13972 1273 aa18.42■□□□□ 0.54
PDCD6-211ENST00000515587 MFSD14BQ5SR56 506 aa18.42■□□□□ 0.54
PDCD6-211ENST00000515587 LDHDQ86WU2 507 aa18.42■□□□□ 0.54
PDCD6-211ENST00000515587 SPATA5Q8NB90 893 aa18.42■□□□□ 0.54
PDCD6-211ENST00000515587 DPF2Q92785 391 aa18.42■□□□□ 0.54
PDCD6-211ENST00000515587 ZBTB12Q9Y330 459 aaPredicted RBP18.42■□□□□ 0.54
PDCD6-211ENST00000515587 H7C1D1 291 aa18.41■□□□□ 0.54
PDCD6-211ENST00000515587 NUCB1Q02818 461 aa18.41■□□□□ 0.54
PDCD6-211ENST00000515587 CHD1LQ86WJ1 897 aa18.41■□□□□ 0.54
PDCD6-211ENST00000515587 OGFOD1Q8N543 542 aa18.41■□□□□ 0.54
PDCD6-211ENST00000515587 ZGPATQ8N5A5 531 aaKnown RBP18.41■□□□□ 0.54
PDCD6-211ENST00000515587 HACL1Q9UJ83 578 aa18.41■□□□□ 0.54
PDCD6-211ENST00000515587 AKAP11Q9UKA4 1901 aa18.41■□□□□ 0.54
PDCD6-211ENST00000515587 MMP14P50281 582 aa18.4■□□□□ 0.54
PDCD6-211ENST00000515587 CENPQQ7L2Z9 268 aaPredicted RBP18.4■□□□□ 0.54
PDCD6-211ENST00000515587 MXD3Q9BW11 206 aa18.4■□□□□ 0.54
PDCD6-211ENST00000515587 LNPKQ9C0E8 428 aa18.4■□□□□ 0.54
PDCD6-211ENST00000515587 TAF1DQ9H5J8 278 aaPredicted RBP18.4■□□□□ 0.54
PDCD6-211ENST00000515587 ECHDC1Q9NTX5 307 aa18.4■□□□□ 0.54
PDCD6-211ENST00000515587 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
PDCD6-211ENST00000515587 GPRC5DQ9NZD1 345 aa18.4■□□□□ 0.54
PDCD6-211ENST00000515587 HMG20BQ9P0W2 317 aa18.4■□□□□ 0.54
PDCD6-211ENST00000515587 CNOT7Q9UIV1 285 aaKnown RBP18.4■□□□□ 0.54
PDCD6-211ENST00000515587 HDAC9Q9UKV0 1011 aa18.4■□□□□ 0.54
PDCD6-211ENST00000515587 COL1A1P02452 1464 aaPredicted RBP18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms