RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CERS5Q8N5B7 392 aa20.11■□□□□ 0.81
LMNA-223ENST00000515459 LINS1Q8NG48 757 aa20.11■□□□□ 0.81
LMNA-223ENST00000515459 DNAAF4Q8WXU2 420 aa20.11■□□□□ 0.81
LMNA-223ENST00000515459 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.11■□□□□ 0.81
LMNA-223ENST00000515459 IRS2Q9Y4H2 1338 aa20.1■□□□□ 0.81
LMNA-223ENST00000515459 TAF5LO75529 589 aa20.1■□□□□ 0.81
LMNA-223ENST00000515459 FKBP5Q13451 457 aaPredicted RBP20.1■□□□□ 0.81
LMNA-223ENST00000515459 C15orf52Q6ZUT6 534 aaKnown RBP20.1■□□□□ 0.81
LMNA-223ENST00000515459 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
LMNA-223ENST00000515459 SSC5DA1L4H1 1573 aa20.09■□□□□ 0.81
LMNA-223ENST00000515459 UNCXA6NJT0 531 aa20.09■□□□□ 0.81
LMNA-223ENST00000515459 SNAP23O00161 211 aa20.09■□□□□ 0.81
LMNA-223ENST00000515459 SUPT20HL1Q3ZLR7 823 aa20.09■□□□□ 0.81
LMNA-223ENST00000515459 ZNF804AQ7Z570 1209 aa20.09■□□□□ 0.81
LMNA-223ENST00000515459 WNK4Q96J92 1243 aa20.09■□□□□ 0.81
LMNA-223ENST00000515459 CLMNQ96JQ2 1002 aa20.09■□□□□ 0.81
LMNA-223ENST00000515459 TRIM17Q9Y577 477 aa20.09■□□□□ 0.81
LMNA-223ENST00000515459 F8W031 263 aaPredicted RBP20.08■□□□□ 0.81
LMNA-223ENST00000515459 IL1R1P14778 569 aa20.08■□□□□ 0.81
LMNA-223ENST00000515459 IFIT5Q13325 482 aaKnown RBP20.08■□□□□ 0.81
LMNA-223ENST00000515459 CFAP100Q494V2 611 aa20.08■□□□□ 0.81
LMNA-223ENST00000515459 HELBQ8NG08 1087 aaPredicted RBP20.08■□□□□ 0.81
LMNA-223ENST00000515459 PCDHAC2Q9Y5I4 1007 aa20.08■□□□□ 0.81
LMNA-223ENST00000515459 CLRN2A0PK11 232 aa20.07■□□□□ 0.8
LMNA-223ENST00000515459 SPDYE2BA6NHP3 402 aa20.07■□□□□ 0.8
LMNA-223ENST00000515459 IGF2BP3O00425 579 aaKnown RBP eCLIP20.07■□□□□ 0.8
LMNA-223ENST00000515459 SPDYE6P0CI01 402 aa20.07■□□□□ 0.8
LMNA-223ENST00000515459 FKBP1AP62942 108 aaKnown RBP20.07■□□□□ 0.8
LMNA-223ENST00000515459 OTOP1Q7RTM1 612 aa20.07■□□□□ 0.8
LMNA-223ENST00000515459 PRMT6Q96LA8 375 aaPredicted RBP20.07■□□□□ 0.8
LMNA-223ENST00000515459 VEZTQ9HBM0 779 aa20.07■□□□□ 0.8
LMNA-223ENST00000515459 CHMP3Q9Y3E7 222 aa20.07■□□□□ 0.8
LMNA-223ENST00000515459 IL16Q14005 1332 aa20.06■□□□□ 0.8
LMNA-223ENST00000515459 INTS3Q68E01 1043 aaKnown RBP20.06■□□□□ 0.8
LMNA-223ENST00000515459 IREB2P48200 963 aaKnown RBP20.05■□□□□ 0.8
LMNA-223ENST00000515459 FOXO4P98177 505 aa20.05■□□□□ 0.8
LMNA-223ENST00000515459 NBPF12Q5TAG4 269 aaPredicted RBP20.05■□□□□ 0.8
LMNA-223ENST00000515459 OTUD7BQ6GQQ9 843 aa20.05■□□□□ 0.8
LMNA-223ENST00000515459 GCC1Q96CN9 775 aa20.05■□□□□ 0.8
LMNA-223ENST00000515459 RBBP6Q7Z6E9 1792 aaKnown RBP20.04■□□□□ 0.8
LMNA-223ENST00000515459 RBM5P52756 815 aaKnown RBP eCLIP20.04■□□□□ 0.8
LMNA-223ENST00000515459 ANKRD13AQ8IZ07 590 aa20.04■□□□□ 0.8
LMNA-223ENST00000515459 ERO1AQ96HE7 468 aa20.04■□□□□ 0.8
LMNA-223ENST00000515459 USP2O75604 605 aaPredicted RBP20.03■□□□□ 0.8
LMNA-223ENST00000515459 RASA3Q14644 834 aa20.03■□□□□ 0.8
LMNA-223ENST00000515459 JAG2Q9Y219 1238 aa20.03■□□□□ 0.8
LMNA-223ENST00000515459 OTOFQ9HC10 1997 aa20.03■□□□□ 0.8
LMNA-223ENST00000515459 FANCIQ9NVI1 1328 aa20.02■□□□□ 0.8
LMNA-223ENST00000515459 CRHR2Q13324 411 aa20.02■□□□□ 0.8
LMNA-223ENST00000515459 PTPN22Q9Y2R2 807 aa20.02■□□□□ 0.8
LMNA-223ENST00000515459 AOX1Q06278 1338 aa20.02■□□□□ 0.79
LMNA-223ENST00000515459 POTEFA5A3E0 1075 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 PLIN1O60240 522 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 VAMP4O75379 141 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 GJA5P36382 358 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 TNFAIP1Q13829 316 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 CCDC57Q2TAC2 916 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
LMNA-223ENST00000515459 TAF7LQ5H9L4 462 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 LMBR1LQ6UX01 489 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 LDHAL6AQ6ZMR3 332 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 CD99L2Q8TCZ2 262 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 CNNM1Q9NRU3 951 aa20.01■□□□□ 0.79
LMNA-223ENST00000515459 F6X3S4 739 aa20■□□□□ 0.79
LMNA-223ENST00000515459 CCDC184Q52MB2 194 aa20■□□□□ 0.79
LMNA-223ENST00000515459 BEND3Q5T5X7 828 aa20■□□□□ 0.79
LMNA-223ENST00000515459 ZNF594Q96JF6 807 aaPredicted RBP20■□□□□ 0.79
LMNA-223ENST00000515459 FAM205AQ6ZU69 1335 aa20■□□□□ 0.79
LMNA-223ENST00000515459 TESPA1A2RU30 521 aaPredicted RBP19.99■□□□□ 0.79
LMNA-223ENST00000515459 SP3Q02447 781 aa19.99■□□□□ 0.79
LMNA-223ENST00000515459 SPDYE2Q495Y8 402 aa19.99■□□□□ 0.79
LMNA-223ENST00000515459 MFSD14BQ5SR56 506 aa19.99■□□□□ 0.79
LMNA-223ENST00000515459 PTPN18Q99952 460 aa19.99■□□□□ 0.79
LMNA-223ENST00000515459 EFCC1Q9HA90 598 aa19.99■□□□□ 0.79
LMNA-223ENST00000515459 ARAP2Q8WZ64 1704 aa19.99■□□□□ 0.79
LMNA-223ENST00000515459 EPHA10Q5JZY3 1008 aa19.98■□□□□ 0.79
LMNA-223ENST00000515459 OPTNQ96CV9 577 aa19.98■□□□□ 0.79
LMNA-223ENST00000515459 ELP3Q9H9T3 547 aa19.98■□□□□ 0.79
LMNA-223ENST00000515459 ZNF70Q9UC06 446 aaPredicted RBP19.98■□□□□ 0.79
LMNA-223ENST00000515459 SERPINA10Q9UK55 444 aa19.98■□□□□ 0.79
LMNA-223ENST00000515459 TTF2Q9UNY4 1162 aaKnown RBP19.98■□□□□ 0.79
LMNA-223ENST00000515459 GRM8O00222 908 aa19.97■□□□□ 0.79
LMNA-223ENST00000515459 EXOSC9Q06265 439 aaKnown RBP19.97■□□□□ 0.79
LMNA-223ENST00000515459 TDRD7Q8NHU6 1098 aaKnown RBP19.97■□□□□ 0.79
LMNA-223ENST00000515459 ARMC5Q96C12 935 aa19.97■□□□□ 0.79
LMNA-223ENST00000515459 TDRD3Q9H7E2 651 aaKnown RBP19.97■□□□□ 0.79
LMNA-223ENST00000515459 UBE4AQ14139 1066 aa19.96■□□□□ 0.79
LMNA-223ENST00000515459 WDR63Q8IWG1 891 aa19.96■□□□□ 0.79
LMNA-223ENST00000515459 C9orf78Q9NZ63 289 aaPredicted RBP19.96■□□□□ 0.79
LMNA-223ENST00000515459 HTTP42858 3142 aa19.96■□□□□ 0.79
LMNA-223ENST00000515459 HIBADHP31937 336 aaKnown RBP19.95■□□□□ 0.78
LMNA-223ENST00000515459 DZIP1LQ8IYY4 767 aaKnown RBP19.95■□□□□ 0.78
LMNA-223ENST00000515459 MS4A4AQ96JQ5 239 aa19.95■□□□□ 0.78
LMNA-223ENST00000515459 KIAA0100Q14667 2235 aaKnown RBP19.94■□□□□ 0.78
LMNA-223ENST00000515459 GYG1P46976 350 aa19.94■□□□□ 0.78
LMNA-223ENST00000515459 TNNI2P48788 182 aa19.94■□□□□ 0.78
LMNA-223ENST00000515459 ARHGEF6Q15052 776 aa19.94■□□□□ 0.78
LMNA-223ENST00000515459 HABP4Q5JVS0 413 aaKnown RBP19.94■□□□□ 0.78
LMNA-223ENST00000515459 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.94■□□□□ 0.78
LMNA-223ENST00000515459 FAM84BQ96KN1 310 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms