RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 ABCF2Q9UG63 623 aa10.98□□□□□ -0.65
CPNE4-213ENST00000515418 K7ELQ4 463 aaPredicted RBP10.97□□□□□ -0.65
CPNE4-213ENST00000515418 ZFYP08048 801 aaPredicted RBP10.97□□□□□ -0.65
CPNE4-213ENST00000515418 PDE6AP16499 860 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 MAGEB6Q8N7X4 407 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 ZNF622Q969S3 477 aaKnown RBP eCLIP10.97□□□□□ -0.65
CPNE4-213ENST00000515418 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
CPNE4-213ENST00000515418 LRP2BPQ9P2M1 347 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 NRXN2Q9P2S2 1712 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 XDHP47989 1333 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 IRS2Q9Y4H2 1338 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 TCRBV5S4A2TA0A5A2 114 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 CASTP20810 708 aaKnown RBP10.97□□□□□ -0.65
CPNE4-213ENST00000515418 PDE6BP35913 854 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 LRRFIP1Q32MZ4 808 aaKnown RBP10.97□□□□□ -0.65
CPNE4-213ENST00000515418 TTLL5Q6EMB2 1281 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 APPBP2Q92624 585 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 KCNB2Q92953 911 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 IL17RAQ96F46 866 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 POLLQ9UGP5 575 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 LEMD3Q9Y2U8 911 aa10.97□□□□□ -0.65
CPNE4-213ENST00000515418 COL1A1P02452 1464 aaPredicted RBP10.97□□□□□ -0.65
CPNE4-213ENST00000515418 PPEF1O14829 653 aaPredicted RBP10.96□□□□□ -0.65
CPNE4-213ENST00000515418 FOXP2O15409 715 aa10.96□□□□□ -0.65
CPNE4-213ENST00000515418 ST18O60284 1047 aa10.96□□□□□ -0.65
CPNE4-213ENST00000515418 UFL1O94874 794 aa10.96□□□□□ -0.65
CPNE4-213ENST00000515418 NPR1P16066 1061 aa10.96□□□□□ -0.65
CPNE4-213ENST00000515418 ZKSCAN1P17029 563 aaPredicted RBP10.96□□□□□ -0.65
CPNE4-213ENST00000515418 CHRNA5P30532 468 aa10.96□□□□□ -0.65
CPNE4-213ENST00000515418 MAP3K12Q12852 859 aa10.96□□□□□ -0.65
CPNE4-213ENST00000515418 CHAF1AQ13111 956 aaPredicted RBP10.96□□□□□ -0.65
CPNE4-213ENST00000515418 ZSCAN25Q6NSZ9 544 aa10.96□□□□□ -0.65
CPNE4-213ENST00000515418 TICAM2Q86XR7 235 aa10.96□□□□□ -0.65
CPNE4-213ENST00000515418 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.65
CPNE4-213ENST00000515418 JAKMIP1Q96N16 626 aaKnown RBP10.96□□□□□ -0.65
CPNE4-213ENST00000515418 GPAA1O43292 621 aa10.96□□□□□ -0.66
CPNE4-213ENST00000515418 CYP21A2P08686 494 aa10.96□□□□□ -0.66
CPNE4-213ENST00000515418 UBE3CQ15386 1083 aa10.96□□□□□ -0.66
CPNE4-213ENST00000515418 MASTLQ96GX5 879 aa10.96□□□□□ -0.66
CPNE4-213ENST00000515418 RAI14Q9P0K7 980 aa10.96□□□□□ -0.66
CPNE4-213ENST00000515418 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.66
CPNE4-213ENST00000515418 GGA1Q9UJY5 639 aa10.96□□□□□ -0.66
CPNE4-213ENST00000515418 DENND2AQ9ULE3 1009 aa10.96□□□□□ -0.66
CPNE4-213ENST00000515418 UTRNP46939 3433 aa10.95□□□□□ -0.66
CPNE4-213ENST00000515418 C6orf229H3BNL8 230 aa10.95□□□□□ -0.66
CPNE4-213ENST00000515418 ADGRA1Q86SQ6 560 aa10.95□□□□□ -0.66
CPNE4-213ENST00000515418 SP8Q8IXZ3 490 aa10.95□□□□□ -0.66
CPNE4-213ENST00000515418 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
CPNE4-213ENST00000515418 ATP6V0A2Q9Y487 856 aa10.95□□□□□ -0.66
CPNE4-213ENST00000515418 U3KPZ7 1027 aaPredicted RBP10.95□□□□□ -0.66
CPNE4-213ENST00000515418 H0YIN7 160 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 RIMBP2O15034 1052 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 FGAP02671 866 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 ALDH1B1P30837 517 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 RNF20Q5VTR2 975 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 CCDC125Q86Z20 511 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 MIGA1Q8NAN2 632 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 ZNF384Q8TF68 577 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 TCEANC2Q96MN5 208 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 DSCC1Q9BVC3 393 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 CACNA1SQ13698 1873 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 COL11A2P13942 1736 aaPredicted RBP10.94□□□□□ -0.66
CPNE4-213ENST00000515418 SRCAPQ6ZRS2 3230 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 ZBTB7AO95365 584 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 APPP05067 770 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 HSP90AA1P07900 732 aaKnown RBP10.94□□□□□ -0.66
CPNE4-213ENST00000515418 CYP7A1P22680 504 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 ATP2B4P23634 1241 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 STRBPQ96SI9 672 aaKnown RBP10.94□□□□□ -0.66
CPNE4-213ENST00000515418 ARMT1Q9H993 441 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 PODXL2Q9NZ53 605 aa10.94□□□□□ -0.66
CPNE4-213ENST00000515418 DOCK2Q92608 1830 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 MBD4O95243 580 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 AK2P54819 239 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 HAND2P61296 217 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 STOX1Q6ZVD7 989 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 RUFY3Q7L099 469 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 TDRD7Q8NHU6 1098 aaKnown RBP10.93□□□□□ -0.66
CPNE4-213ENST00000515418 TMX3Q96JJ7 454 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 TTC14Q96N46 770 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 PDRG1Q9NUG6 133 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
CPNE4-213ENST00000515418 CYP46A1Q9Y6A2 500 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 MYH13Q9UKX3 1938 aa10.93□□□□□ -0.66
CPNE4-213ENST00000515418 SEMA3EO15041 775 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 PRKAB2O43741 272 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 PRDX5P30044 214 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 GRIK5Q16478 980 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 TSGA10IPQ3SY00 556 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 LCORLQ8N3X6 602 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 MPNDQ8N594 471 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 TM6SF1Q9BZW5 370 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 CD209Q9NNX6 404 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 QSER1Q2KHR3 1735 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 SLX4Q8IY92 1834 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 DTNBO60941 627 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 MECOMQ03112 1051 aa10.92□□□□□ -0.66
CPNE4-213ENST00000515418 ZNF804AQ7Z570 1209 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms