RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 SNRPBP14678 240 aaKnown RBP6.17□□□□□ -1.42
HERC6-208ENST00000515365 FBXL19Q6PCT2 694 aa6.17□□□□□ -1.42
HERC6-208ENST00000515365 SYT9Q86SS6 491 aa6.17□□□□□ -1.42
HERC6-208ENST00000515365 ASAP3Q8TDY4 903 aa6.17□□□□□ -1.42
HERC6-208ENST00000515365 HIRIP3Q9BW71 556 aaPredicted RBP6.17□□□□□ -1.42
HERC6-208ENST00000515365 NT5C1AQ9BXI3 368 aa6.17□□□□□ -1.42
HERC6-208ENST00000515365 UBE2OQ9C0C9 1292 aaKnown RBP6.17□□□□□ -1.42
HERC6-208ENST00000515365 PRR12Q9ULL5 1215 aa6.17□□□□□ -1.42
HERC6-208ENST00000515365 TLR6Q9Y2C9 796 aa6.17□□□□□ -1.42
HERC6-208ENST00000515365 C2CD2LO14523 706 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 SMARCA5O60264 1052 aaPredicted RBP6.16□□□□□ -1.42
HERC6-208ENST00000515365 GREM1O60565 184 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 PAGE1O75459 146 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 STK10O94804 968 aaKnown RBP6.16□□□□□ -1.42
HERC6-208ENST00000515365 GHRHP01286 108 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 PF4P02776 101 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 RPS26P62854 115 aaKnown RBP6.16□□□□□ -1.42
HERC6-208ENST00000515365 LMNB2Q03252 620 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 SOGA3Q5TF21 947 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 TTBK2Q6IQ55 1244 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 AGMOQ6ZNB7 445 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 VWA5B2Q8N398 1253 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 NANOS1Q8WY41 292 aaKnown RBP6.16□□□□□ -1.42
HERC6-208ENST00000515365 TNFRSF25Q93038 417 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 POP1Q99575 1024 aaKnown RBP6.16□□□□□ -1.42
HERC6-208ENST00000515365 MUC3BQ9H195 1237 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 RBSNQ9H1K0 784 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 IGFLR1Q9H665 355 aa6.16□□□□□ -1.42
HERC6-208ENST00000515365 SUPT16HQ9Y5B9 1047 aaKnown RBP6.16□□□□□ -1.42
HERC6-208ENST00000515365 CDC14CA4D256 554 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 SMNDC1O75940 238 aaKnown RBP eCLIP6.15□□□□□ -1.42
HERC6-208ENST00000515365 EIF2AK2P19525 551 aaKnown RBP6.15□□□□□ -1.42
HERC6-208ENST00000515365 TFE3P19532 575 aaPredicted RBP6.15□□□□□ -1.42
HERC6-208ENST00000515365 SOX9P48436 509 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 NASPP49321 788 aaPredicted RBP6.15□□□□□ -1.42
HERC6-208ENST00000515365 FAM160A1Q05DH4 1040 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 TBC1D8BQ0IIM8 1120 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 CAMK2GQ13555 558 aaPredicted RBP6.15□□□□□ -1.42
HERC6-208ENST00000515365 CCDC144BQ3MJ40 725 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 GIMAP6Q6P9H5 292 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 SV2AQ7L0J3 742 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 NOP9Q86U38 636 aaKnown RBP6.15□□□□□ -1.42
HERC6-208ENST00000515365 BSNDQ8WZ55 320 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 AVENQ9NQS1 362 aaPredicted RBP6.15□□□□□ -1.42
HERC6-208ENST00000515365 GINM1Q9NU53 330 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 TMEM39AQ9NV64 488 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 GPN3Q9UHW5 284 aaPredicted RBP6.15□□□□□ -1.42
HERC6-208ENST00000515365 EFR3BQ9Y2G0 817 aa6.15□□□□□ -1.42
HERC6-208ENST00000515365 BMP4P12644 408 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 COL9A2Q14055 689 aaPredicted RBP6.14□□□□□ -1.43
HERC6-208ENST00000515365 SNAP47Q5SQN1 464 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 PCNX4Q63HM2 1172 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 CEP135Q66GS9 1140 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 ADAMTSL4Q6UY14 1074 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 FAM35AQ86V20 835 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 GOLM1Q8NBJ4 401 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 PMFBP1Q8TBY8 1022 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 PLD4Q96BZ4 506 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 MDFIQ99750 246 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 CLEC4MQ9H2X3 399 aaPredicted RBP6.14□□□□□ -1.43
HERC6-208ENST00000515365 SLC6A14Q9UN76 642 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 SOX13Q9UN79 622 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 CADPSQ9ULU8 1353 aa6.14□□□□□ -1.43
HERC6-208ENST00000515365 SRCAPQ6ZRS2 3230 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 B3GALT4O96024 378 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 CPB1P15086 417 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 CANXP27824 592 aaKnown RBP6.13□□□□□ -1.43
HERC6-208ENST00000515365 PCBP4P57723 403 aaKnown RBP6.13□□□□□ -1.43
HERC6-208ENST00000515365 PCDH1Q08174 1060 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 PERM1Q5SV97 790 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 VN1R5Q7Z5H4 357 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 TRIM42Q8IWZ5 723 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 ADAM19Q9H013 955 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 UBP1Q9NZI7 540 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 KLF15Q9UIH9 416 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 NAGPAQ9UK23 515 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 STRIP2Q9ULQ0 834 aa6.13□□□□□ -1.43
HERC6-208ENST00000515365 ADARB2-AS1A8MUL3 147 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 SSBP05455 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
HERC6-208ENST00000515365 ARAFP10398 606 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 PTPRAP18433 802 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 BMP6P22004 513 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 ADH7P40394 386 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 CRKP46108 304 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 PPP2R3AQ06190 1150 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 NFX1Q12986 1120 aaKnown RBP6.12□□□□□ -1.43
HERC6-208ENST00000515365 ZNF423Q2M1K9 1284 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 RASIP1Q5U651 963 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 FAM196AQ6ZSG2 479 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 CCDC84Q86UT8 332 aaPredicted RBP6.12□□□□□ -1.43
HERC6-208ENST00000515365 LRRC3Q9BY71 257 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 OSBPL2Q9H1P3 480 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 PIF1Q9H611 641 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 ZNF408Q9H9D4 720 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 FRRS1LQ9P0K9 344 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 SAMM50Q9Y512 469 aa6.12□□□□□ -1.43
HERC6-208ENST00000515365 ROBO2Q9HCK4 1378 aa6.11□□□□□ -1.43
HERC6-208ENST00000515365 MX2P20592 715 aa6.11□□□□□ -1.43
HERC6-208ENST00000515365 NME2P22392 152 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms