RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.45
SNF8-214ENST00000515174 TMED8Q6PL24 325 aaPredicted RBP12.21□□□□□ -0.45
SNF8-214ENST00000515174 RUFY3Q7L099 469 aa12.21□□□□□ -0.45
SNF8-214ENST00000515174 CCDC24Q8N4L8 307 aa12.21□□□□□ -0.45
SNF8-214ENST00000515174 DNAJC5GQ8N7S2 189 aa12.21□□□□□ -0.45
SNF8-214ENST00000515174 APPBP2Q92624 585 aa12.21□□□□□ -0.45
SNF8-214ENST00000515174 NMRK2Q9NPI5 230 aa12.21□□□□□ -0.45
SNF8-214ENST00000515174 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
SNF8-214ENST00000515174 CYP46A1Q9Y6A2 500 aa12.21□□□□□ -0.45
SNF8-214ENST00000515174 AKAP11Q9UKA4 1901 aa12.21□□□□□ -0.46
SNF8-214ENST00000515174 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 A0A0G2JLW4 131 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 POLRMTO00411 1230 aaKnown RBP12.2□□□□□ -0.46
SNF8-214ENST00000515174 CYP2E1P05181 493 aaPredicted RBP12.2□□□□□ -0.46
SNF8-214ENST00000515174 HMGB1P09429 215 aaKnown RBP12.2□□□□□ -0.46
SNF8-214ENST00000515174 PTMSP20962 102 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 TM4SF1P30408 202 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 ZAP70P43403 619 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 KCNJ4P48050 445 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 RPS8P62241 208 aaKnown RBP12.2□□□□□ -0.46
SNF8-214ENST00000515174 FKBP4Q02790 459 aaKnown RBP eCLIP12.2□□□□□ -0.46
SNF8-214ENST00000515174 CHRNDQ07001 517 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 SCARF1Q14162 830 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 ANKRD1Q15327 319 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 C3orf67Q6ZVT6 689 aa12.2□□□□□ -0.46
SNF8-214ENST00000515174 SH2B1Q9NRF2 756 aaPredicted RBP12.2□□□□□ -0.46
SNF8-214ENST00000515174 ZNF804BA4D1E1 1349 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 ADD2P35612 726 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 NBR1Q14596 966 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 CNBD1Q8NA66 436 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
SNF8-214ENST00000515174 ANKRD2Q9GZV1 360 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 CTNNA3Q9UI47 895 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 MINPP1Q9UNW1 487 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 NDUFB9Q9Y6M9 179 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 C10orf71Q711Q0 1435 aa12.19□□□□□ -0.46
SNF8-214ENST00000515174 PDS5AQ29RF7 1337 aaKnown RBP12.18□□□□□ -0.46
SNF8-214ENST00000515174 MYH7P12883 1935 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 SEMA3EO15041 775 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
SNF8-214ENST00000515174 HSPD1P10809 573 aaKnown RBP12.18□□□□□ -0.46
SNF8-214ENST00000515174 CASTP20810 708 aaKnown RBP12.18□□□□□ -0.46
SNF8-214ENST00000515174 MCM4P33991 863 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 PHKA1P46020 1223 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 TGFB2P61812 414 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 HTRA3P83110 453 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 COL13A1Q5TAT6 717 aaPredicted RBP12.18□□□□□ -0.46
SNF8-214ENST00000515174 TNS4Q8IZW8 715 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 FBXL16Q8N461 479 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 RBM46Q8TBY0 533 aaKnown RBP12.18□□□□□ -0.46
SNF8-214ENST00000515174 OSBP2Q969R2 916 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 JAKMIP1Q96N16 626 aaKnown RBP12.18□□□□□ -0.46
SNF8-214ENST00000515174 SEC62Q99442 399 aaKnown RBP12.18□□□□□ -0.46
SNF8-214ENST00000515174 PDRG1Q9NUG6 133 aa12.18□□□□□ -0.46
SNF8-214ENST00000515174 MAST3O60307 1309 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 KLRG2A4D1S0 409 aaPredicted RBP12.17□□□□□ -0.46
SNF8-214ENST00000515174 NPHP1O15259 732 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 SERPINB2P05120 415 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 RPS6KB1P23443 525 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 AK2P54819 239 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 ALX1Q15699 326 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 BLOC1S2Q6QNY1 142 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 FBXO33Q7Z6M2 555 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 SPATA5Q8NB90 893 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
SNF8-214ENST00000515174 KLRG1Q96E93 195 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 GBP4Q96PP9 640 aa12.17□□□□□ -0.46
SNF8-214ENST00000515174 GNL3LQ9NVN8 582 aaKnown RBP12.17□□□□□ -0.46
SNF8-214ENST00000515174 CYP21A2P08686 494 aa12.16□□□□□ -0.46
SNF8-214ENST00000515174 DPEP1P16444 411 aa12.16□□□□□ -0.46
SNF8-214ENST00000515174 MAP3K12Q12852 859 aa12.16□□□□□ -0.46
SNF8-214ENST00000515174 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
SNF8-214ENST00000515174 C15orf52Q6ZUT6 534 aaKnown RBP12.16□□□□□ -0.46
SNF8-214ENST00000515174 NLGN1Q8N2Q7 840 aa12.16□□□□□ -0.46
SNF8-214ENST00000515174 CELF1Q92879 486 aaKnown RBP12.16□□□□□ -0.46
SNF8-214ENST00000515174 TNPO1Q92973 898 aaKnown RBP12.16□□□□□ -0.46
SNF8-214ENST00000515174 NEK1Q96PY6 1258 aa12.16□□□□□ -0.46
SNF8-214ENST00000515174 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.16□□□□□ -0.46
SNF8-214ENST00000515174 PARP3Q9Y6F1 533 aa12.16□□□□□ -0.46
SNF8-214ENST00000515174 SLX4Q8IY92 1834 aa12.16□□□□□ -0.46
SNF8-214ENST00000515174 ZMYM6O95789 1325 aa12.15□□□□□ -0.46
SNF8-214ENST00000515174 MYO5AQ9Y4I1 1855 aaKnown RBP12.15□□□□□ -0.46
SNF8-214ENST00000515174 TCRBV5S4A2TA0A5A2 114 aa12.15□□□□□ -0.46
SNF8-214ENST00000515174 DDX11L8A8MPP1 907 aa12.15□□□□□ -0.46
SNF8-214ENST00000515174 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.46
SNF8-214ENST00000515174 ST5P78524 1137 aa12.15□□□□□ -0.46
SNF8-214ENST00000515174 FSTL1Q12841 308 aa12.15□□□□□ -0.46
SNF8-214ENST00000515174 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
SNF8-214ENST00000515174 CHMP4CQ96CF2 233 aa12.15□□□□□ -0.46
SNF8-214ENST00000515174 AGXT2Q9BYV1 514 aa12.15□□□□□ -0.46
SNF8-214ENST00000515174 PIH1D3Q9NQM4 214 aaKnown RBP12.15□□□□□ -0.46
SNF8-214ENST00000515174 LEMD3Q9Y2U8 911 aa12.15□□□□□ -0.46
SNF8-214ENST00000515174 M0R2C6 588 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 PDE6AP16499 860 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 BCAMP50895 628 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 EXOSC10Q01780 885 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms