RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 CRHR2Q13324 411 aa16.84■□□□□ 0.29
SMAD5-209ENST00000514777 DLGAP5Q15398 846 aa16.84■□□□□ 0.29
SMAD5-209ENST00000514777 NBPF12Q5TAG4 269 aaPredicted RBP16.84■□□□□ 0.29
SMAD5-209ENST00000514777 ARMC5Q96C12 935 aa16.84■□□□□ 0.29
SMAD5-209ENST00000514777 A0A1B0GUL6 1792 aa16.84■□□□□ 0.29
SMAD5-209ENST00000514777 CSF1RP07333 972 aa16.83■□□□□ 0.28
SMAD5-209ENST00000514777 CASP7P55210 303 aa16.83■□□□□ 0.28
SMAD5-209ENST00000514777 G2E3Q7L622 706 aa16.83■□□□□ 0.28
SMAD5-209ENST00000514777 UBE3BQ7Z3V4 1068 aa16.83■□□□□ 0.28
SMAD5-209ENST00000514777 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
SMAD5-209ENST00000514777 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
SMAD5-209ENST00000514777 PLA2G12BQ9BX93 195 aa16.83■□□□□ 0.28
SMAD5-209ENST00000514777 ANKRD2Q9GZV1 360 aa16.83■□□□□ 0.28
SMAD5-209ENST00000514777 OTOFQ9HC10 1997 aa16.82■□□□□ 0.28
SMAD5-209ENST00000514777 TESPA1A2RU30 521 aaPredicted RBP16.82■□□□□ 0.28
SMAD5-209ENST00000514777 UNCXA6NJT0 531 aa16.82■□□□□ 0.28
SMAD5-209ENST00000514777 PPP1R12BO60237 982 aaPredicted RBP16.82■□□□□ 0.28
SMAD5-209ENST00000514777 FXR1P51114 621 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMAD5-209ENST00000514777 CHRNDQ07001 517 aa16.82■□□□□ 0.28
SMAD5-209ENST00000514777 PPP2R3BQ9Y5P8 575 aa16.82■□□□□ 0.28
SMAD5-209ENST00000514777 CLRN2A0PK11 232 aa16.81■□□□□ 0.28
SMAD5-209ENST00000514777 DDX10Q13206 875 aaKnown RBP16.81■□□□□ 0.28
SMAD5-209ENST00000514777 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
SMAD5-209ENST00000514777 C15orf52Q6ZUT6 534 aaKnown RBP16.81■□□□□ 0.28
SMAD5-209ENST00000514777 EFCC1Q9HA90 598 aa16.81■□□□□ 0.28
SMAD5-209ENST00000514777 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
SMAD5-209ENST00000514777 F8W031 263 aaPredicted RBP16.8■□□□□ 0.28
SMAD5-209ENST00000514777 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
SMAD5-209ENST00000514777 SP3Q02447 781 aa16.8■□□□□ 0.28
SMAD5-209ENST00000514777 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
SMAD5-209ENST00000514777 GCKRQ14397 625 aa16.8■□□□□ 0.28
SMAD5-209ENST00000514777 SUPT20HL1Q3ZLR7 823 aa16.8■□□□□ 0.28
SMAD5-209ENST00000514777 MPHOSPH8Q99549 860 aa16.8■□□□□ 0.28
SMAD5-209ENST00000514777 TAF5LO75529 589 aa16.79■□□□□ 0.28
SMAD5-209ENST00000514777 IL1R1P14778 569 aa16.79■□□□□ 0.28
SMAD5-209ENST00000514777 CALD1Q05682 793 aaKnown RBP16.79■□□□□ 0.28
SMAD5-209ENST00000514777 HELBQ8NG08 1087 aaPredicted RBP16.79■□□□□ 0.28
SMAD5-209ENST00000514777 MS4A4AQ96JQ5 239 aa16.79■□□□□ 0.28
SMAD5-209ENST00000514777 RASA3Q14644 834 aa16.78■□□□□ 0.28
SMAD5-209ENST00000514777 OTUD7BQ6GQQ9 843 aa16.78■□□□□ 0.28
SMAD5-209ENST00000514777 ANKRD13AQ8IZ07 590 aa16.78■□□□□ 0.28
SMAD5-209ENST00000514777 ZNF333Q96JL9 665 aa16.78■□□□□ 0.28
SMAD5-209ENST00000514777 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
SMAD5-209ENST00000514777 COLQQ9Y215 455 aaPredicted RBP16.78■□□□□ 0.28
SMAD5-209ENST00000514777 KCNJ4P48050 445 aa16.77■□□□□ 0.28
SMAD5-209ENST00000514777 IREB2P48200 963 aaKnown RBP16.77■□□□□ 0.28
SMAD5-209ENST00000514777 FKBP1AP62942 108 aaKnown RBP16.77■□□□□ 0.28
SMAD5-209ENST00000514777 TSR2Q969E8 191 aaKnown RBP16.77■□□□□ 0.28
SMAD5-209ENST00000514777 VEZTQ9HBM0 779 aa16.77■□□□□ 0.28
SMAD5-209ENST00000514777 JAG2Q9Y219 1238 aa16.77■□□□□ 0.28
SMAD5-209ENST00000514777 ZSWIM8A7E2V4 1837 aa16.77■□□□□ 0.27
SMAD5-209ENST00000514777 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
SMAD5-209ENST00000514777 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
SMAD5-209ENST00000514777 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
SMAD5-209ENST00000514777 OPTNQ96CV9 577 aa16.76■□□□□ 0.27
SMAD5-209ENST00000514777 ELP3Q9H9T3 547 aa16.76■□□□□ 0.27
SMAD5-209ENST00000514777 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
SMAD5-209ENST00000514777 SZT2Q5T011 3432 aa16.75■□□□□ 0.27
SMAD5-209ENST00000514777 MYO1BO43795 1136 aa16.75■□□□□ 0.27
SMAD5-209ENST00000514777 FOXO4P98177 505 aa16.75■□□□□ 0.27
SMAD5-209ENST00000514777 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
SMAD5-209ENST00000514777 BRI3BPQ8WY22 251 aa16.75■□□□□ 0.27
SMAD5-209ENST00000514777 TEPSINQ96N21 525 aa16.75■□□□□ 0.27
SMAD5-209ENST00000514777 STK31Q9BXU1 1019 aa16.75■□□□□ 0.27
SMAD5-209ENST00000514777 PTCH2Q9Y6C5 1203 aa16.75■□□□□ 0.27
SMAD5-209ENST00000514777 ANKRD18BA2A2Z9 1011 aa16.74■□□□□ 0.27
SMAD5-209ENST00000514777 TMEM106CQ9BVX2 250 aa16.74■□□□□ 0.27
SMAD5-209ENST00000514777 CEP290O15078 2479 aa16.74■□□□□ 0.27
SMAD5-209ENST00000514777 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
SMAD5-209ENST00000514777 TDRD3Q9H7E2 651 aaKnown RBP16.73■□□□□ 0.27
SMAD5-209ENST00000514777 ZNF70Q9UC06 446 aaPredicted RBP16.73■□□□□ 0.27
SMAD5-209ENST00000514777 TRIOBPQ9H2D6 2365 aa16.72■□□□□ 0.27
SMAD5-209ENST00000514777 RBM5P52756 815 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMAD5-209ENST00000514777 FLIIQ13045 1269 aa16.72■□□□□ 0.27
SMAD5-209ENST00000514777 TWISTNBQ3B726 338 aaPredicted RBP16.72■□□□□ 0.27
SMAD5-209ENST00000514777 ZNF804AQ7Z570 1209 aa16.72■□□□□ 0.27
SMAD5-209ENST00000514777 FAM43AQ8N2R8 423 aa16.72■□□□□ 0.27
SMAD5-209ENST00000514777 LINS1Q8NG48 757 aa16.72■□□□□ 0.27
SMAD5-209ENST00000514777 DNAAF4Q8WXU2 420 aa16.72■□□□□ 0.27
SMAD5-209ENST00000514777 OTUD5Q96G74 571 aa16.72■□□□□ 0.27
SMAD5-209ENST00000514777 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
SMAD5-209ENST00000514777 ARAP2Q8WZ64 1704 aa16.72■□□□□ 0.27
SMAD5-209ENST00000514777 FAM205AQ6ZU69 1335 aa16.71■□□□□ 0.27
SMAD5-209ENST00000514777 TAF1CQ15572 869 aaPredicted RBP16.71■□□□□ 0.27
SMAD5-209ENST00000514777 SLC9C1Q4G0N8 1177 aa16.71■□□□□ 0.27
SMAD5-209ENST00000514777 ZNF594Q96JF6 807 aaPredicted RBP16.71■□□□□ 0.27
SMAD5-209ENST00000514777 MYH16Q9H6N6 1097 aa16.71■□□□□ 0.27
SMAD5-209ENST00000514777 ZFYVE28Q9HCC9 887 aa16.71■□□□□ 0.27
SMAD5-209ENST00000514777 CCL15-CCL14A0A0B4J2E2 113 aa16.7■□□□□ 0.26
SMAD5-209ENST00000514777 H0YGN5 161 aa16.7■□□□□ 0.26
SMAD5-209ENST00000514777 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
SMAD5-209ENST00000514777 IFIT5Q13325 482 aaKnown RBP16.7■□□□□ 0.26
SMAD5-209ENST00000514777 VGLL4Q14135 290 aa16.7■□□□□ 0.26
SMAD5-209ENST00000514777 CCL15Q16663 113 aa16.7■□□□□ 0.26
SMAD5-209ENST00000514777 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
SMAD5-209ENST00000514777 NBPF11Q86T75 865 aa16.7■□□□□ 0.26
SMAD5-209ENST00000514777 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMAD5-209ENST00000514777 TDRD7Q8NHU6 1098 aaKnown RBP16.7■□□□□ 0.26
SMAD5-209ENST00000514777 ARHGAP39Q9C0H5 1083 aa16.7■□□□□ 0.26
SMAD5-209ENST00000514777 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms