RNA–Protein interactions for RNA: ENST00000514773.1

PCDH1-207, Transcript of protocadherin 1, humanhuman

TSL 4

Gene PCDH1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-207ENST00000514773 RAB11FIP3O75154 756 aa22.11■■□□□ 1.13
PCDH1-207ENST00000514773 SIRT2Q8IXJ6 389 aa22.11■■□□□ 1.13
PCDH1-207ENST00000514773 GMLQ99445 158 aa22.11■■□□□ 1.13
PCDH1-207ENST00000514773 HDAC9Q9UKV0 1011 aa22.11■■□□□ 1.13
PCDH1-207ENST00000514773 EXOC6BQ9Y2D4 811 aa22.11■■□□□ 1.13
PCDH1-207ENST00000514773 C1QTNF8P60827 252 aa22.1■■□□□ 1.13
PCDH1-207ENST00000514773 CHADLQ6NUI6 762 aa22.1■■□□□ 1.13
PCDH1-207ENST00000514773 XAGE2Q96GT9 111 aa22.1■■□□□ 1.13
PCDH1-207ENST00000514773 ZBTB22O15209 634 aa22.09■■□□□ 1.13
PCDH1-207ENST00000514773 ZNF280AP59817 542 aaPredicted RBP22.09■■□□□ 1.13
PCDH1-207ENST00000514773 TNNI3KQ59H18 835 aa22.09■■□□□ 1.13
PCDH1-207ENST00000514773 ZC3H15Q8WU90 426 aaKnown RBP22.09■■□□□ 1.13
PCDH1-207ENST00000514773 FPGT-TNNI3KV9GXZ4 949 aa22.09■■□□□ 1.13
PCDH1-207ENST00000514773 MFSD14BQ5SR56 506 aa22.08■■□□□ 1.13
PCDH1-207ENST00000514773 CCDC102BQ68D86 513 aa22.08■■□□□ 1.13
PCDH1-207ENST00000514773 WDR66Q8TBY9 1149 aa22.08■■□□□ 1.13
PCDH1-207ENST00000514773 KIF1BPQ96EK5 621 aa22.08■■□□□ 1.13
PCDH1-207ENST00000514773 DENND2AQ9ULE3 1009 aa22.08■■□□□ 1.13
PCDH1-207ENST00000514773 IQSEC3Q9UPP2 1182 aaPredicted RBP22.08■■□□□ 1.13
PCDH1-207ENST00000514773 CHAF1AQ13111 956 aaPredicted RBP22.07■■□□□ 1.12
PCDH1-207ENST00000514773 MXD3Q9BW11 206 aa22.07■■□□□ 1.12
PCDH1-207ENST00000514773 MYOZ2Q9NPC6 264 aa22.07■■□□□ 1.12
PCDH1-207ENST00000514773 ADORA1P30542 326 aa22.06■■□□□ 1.12
PCDH1-207ENST00000514773 KIF4BQ2VIQ3 1234 aa22.06■■□□□ 1.12
PCDH1-207ENST00000514773 CCDC158Q5M9N0 1113 aa22.06■■□□□ 1.12
PCDH1-207ENST00000514773 KIAA0825Q8IV33 1275 aa22.06■■□□□ 1.12
PCDH1-207ENST00000514773 CLASRPQ8N2M8 674 aaKnown RBP22.06■■□□□ 1.12
PCDH1-207ENST00000514773 RHPN1Q8TCX5 695 aa22.06■■□□□ 1.12
PCDH1-207ENST00000514773 SUGT1Q9Y2Z0 365 aa22.06■■□□□ 1.12
PCDH1-207ENST00000514773 ARAP2Q8WZ64 1704 aa22.06■■□□□ 1.12
PCDH1-207ENST00000514773 PHKA1P46020 1223 aa22.05■■□□□ 1.12
PCDH1-207ENST00000514773 TBC1D10BQ4KMP7 808 aaPredicted RBP22.05■■□□□ 1.12
PCDH1-207ENST00000514773 RBM26Q5T8P6 1007 aaKnown RBP22.05■■□□□ 1.12
PCDH1-207ENST00000514773 SAMD7Q7Z3H4 446 aa22.05■■□□□ 1.12
PCDH1-207ENST00000514773 JAG2Q9Y219 1238 aa22.05■■□□□ 1.12
PCDH1-207ENST00000514773 UQCRFS1P1P0C7P4 283 aa22.04■■□□□ 1.12
PCDH1-207ENST00000514773 POTEIP0CG38 1075 aa22.04■■□□□ 1.12
PCDH1-207ENST00000514773 POTEJP0CG39 1038 aa22.04■■□□□ 1.12
PCDH1-207ENST00000514773 ZGPATQ8N5A5 531 aaKnown RBP22.04■■□□□ 1.12
PCDH1-207ENST00000514773 CERS5Q8N5B7 392 aa22.04■■□□□ 1.12
PCDH1-207ENST00000514773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.04■■□□□ 1.12
PCDH1-207ENST00000514773 PDS5AQ29RF7 1337 aaKnown RBP22.04■■□□□ 1.12
PCDH1-207ENST00000514773 SHTN1A0MZ66 631 aa22.03■■□□□ 1.12
PCDH1-207ENST00000514773 APBB1O00213 710 aa22.03■■□□□ 1.12
PCDH1-207ENST00000514773 TRPM4Q8TD43 1214 aa22.03■■□□□ 1.12
PCDH1-207ENST00000514773 LRRCC1Q9C099 1032 aa22.03■■□□□ 1.12
PCDH1-207ENST00000514773 PCDHB15Q9Y5E8 787 aa22.03■■□□□ 1.12
PCDH1-207ENST00000514773 MAST3O60307 1309 aa22.03■■□□□ 1.12
PCDH1-207ENST00000514773 TTC39AQ5SRH9 613 aa22.02■■□□□ 1.12
PCDH1-207ENST00000514773 AACSQ86V21 672 aa22.02■■□□□ 1.12
PCDH1-207ENST00000514773 DCTPP1Q9H773 170 aa22.02■■□□□ 1.12
PCDH1-207ENST00000514773 PGAP2Q9UHJ9 254 aa22.02■■□□□ 1.12
PCDH1-207ENST00000514773 TTF2Q9UNY4 1162 aaKnown RBP22.02■■□□□ 1.12
PCDH1-207ENST00000514773 ZNF646O15015 1829 aaPredicted RBP22.01■■□□□ 1.11
PCDH1-207ENST00000514773 F8W031 263 aaPredicted RBP22.01■■□□□ 1.11
PCDH1-207ENST00000514773 ARID4AP29374 1257 aaPredicted RBP22.01■■□□□ 1.11
PCDH1-207ENST00000514773 HIRAP54198 1017 aaPredicted RBP22.01■■□□□ 1.11
PCDH1-207ENST00000514773 CNTROBQ8N137 903 aa22.01■■□□□ 1.11
PCDH1-207ENST00000514773 DCPSQ96C86 337 aaKnown RBP22.01■■□□□ 1.11
PCDH1-207ENST00000514773 EAF2Q96CJ1 260 aaPredicted RBP22.01■■□□□ 1.11
PCDH1-207ENST00000514773 SERPINA10Q9UK55 444 aa22.01■■□□□ 1.11
PCDH1-207ENST00000514773 ADAMTSL1Q8N6G6 1762 aa22.01■■□□□ 1.11
PCDH1-207ENST00000514773 SALL1Q9NSC2 1324 aa22.01■■□□□ 1.11
PCDH1-207ENST00000514773 MYH13Q9UKX3 1938 aa22■■□□□ 1.11
PCDH1-207ENST00000514773 IFIT2P09913 472 aaKnown RBP22■■□□□ 1.11
PCDH1-207ENST00000514773 RASGRF1Q13972 1273 aa22■■□□□ 1.11
PCDH1-207ENST00000514773 SCARF1Q14162 830 aa22■■□□□ 1.11
PCDH1-207ENST00000514773 DLGAP5Q15398 846 aa22■■□□□ 1.11
PCDH1-207ENST00000514773 MAP1SQ66K74 1059 aaPredicted RBP22■■□□□ 1.11
PCDH1-207ENST00000514773 SPTY2D1Q68D10 685 aaPredicted RBP22■■□□□ 1.11
PCDH1-207ENST00000514773 MTMR14Q8NCE2 650 aa22■■□□□ 1.11
PCDH1-207ENST00000514773 EXOC6Q8TAG9 804 aa22■■□□□ 1.11
PCDH1-207ENST00000514773 ZNF512BQ96KM6 892 aaPredicted RBP22■■□□□ 1.11
PCDH1-207ENST00000514773 DBNDD2Q9BQY9 259 aa22■■□□□ 1.11
PCDH1-207ENST00000514773 IL1RAPL2Q9NP60 686 aa22■■□□□ 1.11
PCDH1-207ENST00000514773 MYO1BO43795 1136 aa21.99■■□□□ 1.11
PCDH1-207ENST00000514773 RBM5P52756 815 aaKnown RBP eCLIP21.99■■□□□ 1.11
PCDH1-207ENST00000514773 HDLBPQ00341 1268 aaKnown RBP21.99■■□□□ 1.11
PCDH1-207ENST00000514773 HDAC1Q13547 482 aaPredicted RBP21.99■■□□□ 1.11
PCDH1-207ENST00000514773 SPATA5Q8NB90 893 aa21.99■■□□□ 1.11
PCDH1-207ENST00000514773 MRIQ9BWK5 157 aa21.99■■□□□ 1.11
PCDH1-207ENST00000514773 CCDC8Q9H0W5 538 aaPredicted RBP21.99■■□□□ 1.11
PCDH1-207ENST00000514773 DBNLQ9UJU6 430 aaKnown RBP21.99■■□□□ 1.11
PCDH1-207ENST00000514773 EGFRP00533 1210 aa21.98■■□□□ 1.11
PCDH1-207ENST00000514773 LDHBP07195 334 aaKnown RBP21.98■■□□□ 1.11
PCDH1-207ENST00000514773 CDC37L1Q7L3B6 337 aa21.98■■□□□ 1.11
PCDH1-207ENST00000514773 RWDD1Q9H446 243 aaPredicted RBP21.98■■□□□ 1.11
PCDH1-207ENST00000514773 ZBTB47Q9UFB7 747 aaPredicted RBP21.98■■□□□ 1.11
PCDH1-207ENST00000514773 TEKT1Q969V4 418 aa21.97■■□□□ 1.11
PCDH1-207ENST00000514773 PITPNM2Q9BZ72 1349 aa21.97■■□□□ 1.11
PCDH1-207ENST00000514773 WNT10BO00744 389 aa21.96■■□□□ 1.11
PCDH1-207ENST00000514773 CENPBP07199 599 aaPredicted RBP21.96■■□□□ 1.11
PCDH1-207ENST00000514773 HSPA6P17066 643 aa21.96■■□□□ 1.11
PCDH1-207ENST00000514773 CFAP100Q494V2 611 aa21.96■■□□□ 1.11
PCDH1-207ENST00000514773 SULF1Q8IWU6 871 aa21.96■■□□□ 1.11
PCDH1-207ENST00000514773 GCC1Q96CN9 775 aa21.96■■□□□ 1.11
PCDH1-207ENST00000514773 HMG20BQ9P0W2 317 aa21.96■■□□□ 1.11
PCDH1-207ENST00000514773 COL1A1P02452 1464 aaPredicted RBP21.96■■□□□ 1.11
PCDH1-207ENST00000514773 ITGBL1O95965 494 aaPredicted RBP21.95■■□□□ 1.1
PCDH1-207ENST00000514773 NBPF9Q3BBW0 867 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms