RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 Q4G0T1 1027 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 BRAPQ7Z569 592 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 ZFAND2BQ8WV99 257 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 CHIC2Q9UKJ5 165 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 DDX19BQ9UMR2 479 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 XBP1P17861 261 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 PLCB4Q15147 1175 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 B4GALNT4Q76KP1 1039 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 KAT14Q9H8E8 782 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 SAMM50Q9Y512 469 aa18.51■□□□□ 0.55
CDH6-205ENST00000514738 SLC27A2O14975 620 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 PRPF6O94906 941 aaKnown RBP18.5■□□□□ 0.55
CDH6-205ENST00000514738 U2AF1L5P0DN76 240 aaPredicted RBP18.5■□□□□ 0.55
CDH6-205ENST00000514738 U2AF1Q01081 240 aaKnown RBP eCLIP18.5■□□□□ 0.55
CDH6-205ENST00000514738 CUL3Q13618 768 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 GNPTABQ3T906 1256 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 CCDC80Q76M96 950 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 NAT10Q9H0A0 1025 aaKnown RBP18.5■□□□□ 0.55
CDH6-205ENST00000514738 IQSEC3Q9UPP2 1182 aaPredicted RBP18.5■□□□□ 0.55
CDH6-205ENST00000514738 ZNF510Q9Y2H8 683 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 B4DLN1 442 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 ZSCAN12O43309 604 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 RPL13P26373 211 aaKnown RBP18.5■□□□□ 0.55
CDH6-205ENST00000514738 KCNJ6P48051 423 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 CAMK4Q16566 473 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 GALNT15Q8N3T1 639 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
CDH6-205ENST00000514738 NUP62CLQ9H1M0 184 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 ABCB6Q9NP58 842 aa18.5■□□□□ 0.55
CDH6-205ENST00000514738 PDLIM1O00151 329 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
CDH6-205ENST00000514738 NEK4P51957 841 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 SESN3P58005 492 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 ACCSLQ4AC99 568 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 SYNE3Q6ZMZ3 975 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 LINGO3P0C6S8 592 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 CA8P35219 290 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 RBM26Q5T8P6 1007 aaKnown RBP18.49■□□□□ 0.55
CDH6-205ENST00000514738 APBB1IPQ7Z5R6 666 aaPredicted RBP18.49■□□□□ 0.55
CDH6-205ENST00000514738 STAG2Q8N3U4 1231 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 SLC35B4Q969S0 331 aa18.49■□□□□ 0.55
CDH6-205ENST00000514738 TMED1Q13445 227 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 PRPF40BQ6NWY9 871 aaKnown RBP18.48■□□□□ 0.55
CDH6-205ENST00000514738 SPATS2Q86XZ4 545 aaKnown RBP18.48■□□□□ 0.55
CDH6-205ENST00000514738 CKAP2LQ8IYA6 745 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 CCDC170Q8IYT3 715 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 RMDN2Q96LZ7 410 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 GBP3Q9H0R5 595 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 TPX2Q9ULW0 747 aaKnown RBP18.48■□□□□ 0.55
CDH6-205ENST00000514738 ABCC2Q92887 1545 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 PKN1Q16512 942 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 ITPRIPQ8IWB1 547 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 CCDC47Q96A33 483 aaKnown RBP18.48■□□□□ 0.55
CDH6-205ENST00000514738 ACSBG1Q96GR2 724 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 RABEP2Q9H5N1 569 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 RAB21Q9UL25 225 aa18.48■□□□□ 0.55
CDH6-205ENST00000514738 PPFIA3O75145 1194 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 SYF2O95926 243 aaKnown RBP18.47■□□□□ 0.55
CDH6-205ENST00000514738 INHBCP55103 352 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 CYB5D1Q6P9G0 228 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 CCDC13Q8IYE1 715 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 NEK9Q8TD19 979 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 NSMCE1Q8WV22 266 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 ABCA10Q8WWZ4 1543 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 MYO1AQ9UBC5 1043 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 RABL2BQ9UNT1 228 aa18.47■□□□□ 0.55
CDH6-205ENST00000514738 PCF11O94913 1555 aaKnown RBP18.47■□□□□ 0.55
CDH6-205ENST00000514738 TRPC1P48995 793 aa18.46■□□□□ 0.55
CDH6-205ENST00000514738 KBTBD12Q3ZCT8 623 aa18.46■□□□□ 0.55
CDH6-205ENST00000514738 IGSF22Q8N9C0 903 aa18.46■□□□□ 0.55
CDH6-205ENST00000514738 DTNBP1Q96EV8 351 aa18.46■□□□□ 0.55
CDH6-205ENST00000514738 EHD4Q9H223 541 aa18.46■□□□□ 0.55
CDH6-205ENST00000514738 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
CDH6-205ENST00000514738 SYNMO15061 1565 aa18.46■□□□□ 0.55
CDH6-205ENST00000514738 GALNT17Q6IS24 598 aa18.46■□□□□ 0.55
CDH6-205ENST00000514738 YTHDF3Q7Z739 585 aaKnown RBP18.46■□□□□ 0.55
CDH6-205ENST00000514738 DNAJC25Q9H1X3 360 aa18.46■□□□□ 0.55
CDH6-205ENST00000514738 KIF3BO15066 747 aa18.45■□□□□ 0.54
CDH6-205ENST00000514738 MBD4O95243 580 aa18.45■□□□□ 0.54
CDH6-205ENST00000514738 ANKZF1Q9H8Y5 726 aa18.45■□□□□ 0.54
CDH6-205ENST00000514738 THRAP3Q9Y2W1 955 aaKnown RBP18.45■□□□□ 0.54
CDH6-205ENST00000514738 EIF3HO15372 352 aaKnown RBP eCLIP18.45■□□□□ 0.54
CDH6-205ENST00000514738 MYO1BO43795 1136 aa18.45■□□□□ 0.54
CDH6-205ENST00000514738 SMIM24O75264 130 aa18.45■□□□□ 0.54
CDH6-205ENST00000514738 KRT38O76015 456 aa18.45■□□□□ 0.54
CDH6-205ENST00000514738 SSBP05455 408 aaKnown RBP eCLIP18.45■□□□□ 0.54
CDH6-205ENST00000514738 POLR3CQ9BUI4 534 aaPredicted RBP18.45■□□□□ 0.54
CDH6-205ENST00000514738 POTEB2H3BUK9 544 aa18.44■□□□□ 0.54
CDH6-205ENST00000514738 ZSCAN22P10073 491 aaPredicted RBP18.44■□□□□ 0.54
CDH6-205ENST00000514738 GSPT1P15170 499 aaKnown RBP18.44■□□□□ 0.54
CDH6-205ENST00000514738 PABPC4Q13310 644 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDH6-205ENST00000514738 ENOX2Q16206 610 aaKnown RBP18.44■□□□□ 0.54
CDH6-205ENST00000514738 CCDC57Q2TAC2 916 aa18.44■□□□□ 0.54
CDH6-205ENST00000514738 INTS3Q68E01 1043 aaKnown RBP18.44■□□□□ 0.54
CDH6-205ENST00000514738 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
CDH6-205ENST00000514738 MPHOSPH8Q99549 860 aa18.44■□□□□ 0.54
CDH6-205ENST00000514738 OSBPL5Q9H0X9 879 aaPredicted RBP18.44■□□□□ 0.54
CDH6-205ENST00000514738 TNMDQ9H2S6 317 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms