RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 GPATCH3Q96I76 525 aa7.03□□□□□ -1.28
PROM1-217ENST00000514693 POLR3GLQ9BT43 218 aa7.03□□□□□ -1.28
PROM1-217ENST00000514693 JPH1Q9HDC5 661 aaPredicted RBP7.03□□□□□ -1.28
PROM1-217ENST00000514693 FAM13BQ9NYF5 915 aa7.03□□□□□ -1.28
PROM1-217ENST00000514693 RAC1P63000 192 aa7.02□□□□□ -1.29
PROM1-217ENST00000514693 COL9A3Q14050 684 aaPredicted RBP7.02□□□□□ -1.29
PROM1-217ENST00000514693 XP32Q5T750 250 aa7.02□□□□□ -1.29
PROM1-217ENST00000514693 C20orf204Q6ZNR8 217 aa7.02□□□□□ -1.29
PROM1-217ENST00000514693 NUDT8Q8WV74 236 aa7.02□□□□□ -1.29
PROM1-217ENST00000514693 GSX2Q9BZM3 304 aa7.02□□□□□ -1.29
PROM1-217ENST00000514693 COPRSQ9NQ92 184 aa7.02□□□□□ -1.29
PROM1-217ENST00000514693 DNAJB12Q9NXW2 375 aaKnown RBP7.02□□□□□ -1.29
PROM1-217ENST00000514693 DMGDHQ9UI17 866 aaKnown RBP7.02□□□□□ -1.29
PROM1-217ENST00000514693 BCS1LQ9Y276 419 aa7.02□□□□□ -1.29
PROM1-217ENST00000514693 MRPL42Q9Y6G3 142 aaKnown RBP7.02□□□□□ -1.29
PROM1-217ENST00000514693 MICAL2O94851 1124 aa7.01□□□□□ -1.29
PROM1-217ENST00000514693 ST13P50502 369 aaKnown RBP7.01□□□□□ -1.29
PROM1-217ENST00000514693 GRIK4Q16099 956 aa7.01□□□□□ -1.29
PROM1-217ENST00000514693 NFE2L2Q16236 605 aa7.01□□□□□ -1.29
PROM1-217ENST00000514693 PCSK7Q16549 785 aa7.01□□□□□ -1.29
PROM1-217ENST00000514693 ERMP1Q7Z2K6 904 aa7.01□□□□□ -1.29
PROM1-217ENST00000514693 CKAP2LQ8IYA6 745 aa7.01□□□□□ -1.29
PROM1-217ENST00000514693 MRFAP1L1Q96HT8 127 aa7.01□□□□□ -1.29
PROM1-217ENST00000514693 FAM8A1Q9UBU6 413 aa7.01□□□□□ -1.29
PROM1-217ENST00000514693 FOXD3Q9UJU5 478 aaPredicted RBP7.01□□□□□ -1.29
PROM1-217ENST00000514693 MARCH6O60337 910 aa7□□□□□ -1.29
PROM1-217ENST00000514693 EIF5BO60841 1220 aaKnown RBP7□□□□□ -1.29
PROM1-217ENST00000514693 RAB11FIP3O75154 756 aa7□□□□□ -1.29
PROM1-217ENST00000514693 TNFRSF21O75509 655 aa7□□□□□ -1.29
PROM1-217ENST00000514693 RGS9O75916 674 aaPredicted RBP7□□□□□ -1.29
PROM1-217ENST00000514693 USP17L7P0C7H9 530 aa7□□□□□ -1.29
PROM1-217ENST00000514693 HSD3B2P26439 372 aa7□□□□□ -1.29
PROM1-217ENST00000514693 IDH3AP50213 366 aa7□□□□□ -1.29
PROM1-217ENST00000514693 PTPROQ16827 1216 aa7□□□□□ -1.29
PROM1-217ENST00000514693 PSAPL1Q6NUJ1 521 aa7□□□□□ -1.29
PROM1-217ENST00000514693 C9orf172C9J069 976 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 CLSTN1O94985 981 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 ELNP15502 786 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 ARSDP51689 593 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 IGBP1P78318 339 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 NXPE4Q6UWF7 544 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 FAM35AQ86V20 835 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 Q8N3U1 123 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 RASGRP4Q8TDF6 673 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 MICAL1Q8TDZ2 1067 aa6.99□□□□□ -1.29
PROM1-217ENST00000514693 hCG_2014768A0A024R1R8 64 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 A0A0A0MRY4 1105 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 XRCC5P13010 732 aaKnown RBP6.98□□□□□ -1.29
PROM1-217ENST00000514693 INPP5BP32019 993 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 SERINC3Q13530 473 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 NBPF6Q5VWK0 638 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 KRT25Q7Z3Z0 450 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 KCNB2Q92953 911 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 NBPF4Q96M43 638 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 ZFYVE28Q9HCC9 887 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 TPSG1Q9NRR2 321 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 KBTBD4Q9NVX7 518 aa6.98□□□□□ -1.29
PROM1-217ENST00000514693 SSBP05455 408 aaKnown RBP eCLIP6.97□□□□□ -1.29
PROM1-217ENST00000514693 CPB1P15086 417 aa6.97□□□□□ -1.29
PROM1-217ENST00000514693 IBSPP21815 317 aaPredicted RBP6.97□□□□□ -1.29
PROM1-217ENST00000514693 AFF1P51825 1210 aaKnown RBP6.97□□□□□ -1.29
PROM1-217ENST00000514693 NRG1Q02297 640 aaPredicted RBP6.97□□□□□ -1.29
PROM1-217ENST00000514693 XKR5Q6UX68 686 aa6.97□□□□□ -1.29
PROM1-217ENST00000514693 NOL8Q76FK4 1167 aaKnown RBP6.97□□□□□ -1.29
PROM1-217ENST00000514693 SNX29Q8TEQ0 813 aa6.97□□□□□ -1.29
PROM1-217ENST00000514693 SEC16BQ96JE7 1060 aa6.97□□□□□ -1.29
PROM1-217ENST00000514693 SPON2Q9BUD6 331 aa6.97□□□□□ -1.29
PROM1-217ENST00000514693 BCO2Q9BYV7 579 aa6.97□□□□□ -1.29
PROM1-217ENST00000514693 SRCIN1Q9C0H9 1055 aa6.97□□□□□ -1.29
PROM1-217ENST00000514693 NPHS2Q9NP85 383 aa6.97□□□□□ -1.29
PROM1-217ENST00000514693 NAGPAQ9UK23 515 aa6.97□□□□□ -1.29
PROM1-217ENST00000514693 PHACTR2O75167 634 aa6.96□□□□□ -1.3
PROM1-217ENST00000514693 MAP3K6O95382 1288 aa6.96□□□□□ -1.3
PROM1-217ENST00000514693 RARAP10276 462 aa6.96□□□□□ -1.3
PROM1-217ENST00000514693 ZMYM1Q5SVZ6 1142 aa6.96□□□□□ -1.3
PROM1-217ENST00000514693 DHX32Q7L7V1 743 aaKnown RBP6.96□□□□□ -1.3
PROM1-217ENST00000514693 ZNF438Q7Z4V0 828 aa6.96□□□□□ -1.3
PROM1-217ENST00000514693 DMRTC2Q8IXT2 367 aaPredicted RBP6.96□□□□□ -1.3
PROM1-217ENST00000514693 ZNF408Q9H9D4 720 aa6.96□□□□□ -1.3
PROM1-217ENST00000514693 C11orf16Q9NQ32 467 aa6.96□□□□□ -1.3
PROM1-217ENST00000514693 USP21Q9UK80 565 aa6.96□□□□□ -1.3
PROM1-217ENST00000514693 USP20Q9Y2K6 914 aa6.96□□□□□ -1.3
PROM1-217ENST00000514693 GADD45BO75293 160 aaPredicted RBP6.95□□□□□ -1.3
PROM1-217ENST00000514693 POLR3DP05423 398 aaPredicted RBP6.95□□□□□ -1.3
PROM1-217ENST00000514693 TARSP26639 723 aaKnown RBP6.95□□□□□ -1.3
PROM1-217ENST00000514693 NASPP49321 788 aaPredicted RBP6.95□□□□□ -1.3
PROM1-217ENST00000514693 RSPO4Q2I0M5 234 aaPredicted RBP6.95□□□□□ -1.3
PROM1-217ENST00000514693 RNF187Q5TA31 235 aaPredicted RBP6.95□□□□□ -1.3
PROM1-217ENST00000514693 ELMSAN1Q6PJG2 1045 aa6.95□□□□□ -1.3
PROM1-217ENST00000514693 KIAA0825Q8IV33 1275 aa6.95□□□□□ -1.3
PROM1-217ENST00000514693 MKL1Q969V6 931 aa6.95□□□□□ -1.3
PROM1-217ENST00000514693 FNDC3AQ9Y2H6 1198 aaKnown RBP6.95□□□□□ -1.3
PROM1-217ENST00000514693 SASH3O75995 380 aa6.94□□□□□ -1.3
PROM1-217ENST00000514693 ANAPC15P60006 121 aa6.94□□□□□ -1.3
PROM1-217ENST00000514693 MLLT1Q03111 559 aaPredicted RBP6.94□□□□□ -1.3
PROM1-217ENST00000514693 ADGRE1Q14246 886 aa6.94□□□□□ -1.3
PROM1-217ENST00000514693 MBTPS1Q14703 1052 aa6.94□□□□□ -1.3
PROM1-217ENST00000514693 NKAPLQ5M9Q1 402 aa6.94□□□□□ -1.3
PROM1-217ENST00000514693 PDE12Q6L8Q7 609 aaKnown RBP6.94□□□□□ -1.3
PROM1-217ENST00000514693 TXNRD3Q86VQ6 643 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms