RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CDC27P30260 824 aa8.59□□□□□ -1.03
HMGCS1-207ENST00000514610 ITGAEP38570 1179 aa8.59□□□□□ -1.03
HMGCS1-207ENST00000514610 MAP3K10Q02779 954 aa8.59□□□□□ -1.03
HMGCS1-207ENST00000514610 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
HMGCS1-207ENST00000514610 USP31Q70CQ4 1352 aa8.59□□□□□ -1.03
HMGCS1-207ENST00000514610 FBXO24O75426 580 aa8.58□□□□□ -1.04
HMGCS1-207ENST00000514610 NID1P14543 1247 aa8.58□□□□□ -1.04
HMGCS1-207ENST00000514610 ILDR2Q71H61 639 aa8.58□□□□□ -1.04
HMGCS1-207ENST00000514610 IL22RA1Q8N6P7 574 aa8.58□□□□□ -1.04
HMGCS1-207ENST00000514610 TCF3P15923 654 aa8.57□□□□□ -1.04
HMGCS1-207ENST00000514610 FANCCQ00597 558 aa8.57□□□□□ -1.04
HMGCS1-207ENST00000514610 TAF1CQ15572 869 aaPredicted RBP8.57□□□□□ -1.04
HMGCS1-207ENST00000514610 ZNF423Q2M1K9 1284 aa8.57□□□□□ -1.04
HMGCS1-207ENST00000514610 HGSNATQ68CP4 663 aa8.57□□□□□ -1.04
HMGCS1-207ENST00000514610 ANKRD24Q8TF21 1146 aa8.57□□□□□ -1.04
HMGCS1-207ENST00000514610 CLEC4MQ9H2X3 399 aaPredicted RBP8.57□□□□□ -1.04
HMGCS1-207ENST00000514610 PPM1HQ9ULR3 514 aa8.57□□□□□ -1.04
HMGCS1-207ENST00000514610 TTF2Q9UNY4 1162 aaKnown RBP8.57□□□□□ -1.04
HMGCS1-207ENST00000514610 SCAMP3O14828 347 aaKnown RBP8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 CDC25BP30305 580 aa8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 ST13P50502 369 aaKnown RBP8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 SNRPNP63162 240 aaKnown RBP8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 HDLBPQ00341 1268 aaKnown RBP8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 PCDH1Q08174 1060 aa8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 TXNDC11Q6PKC3 985 aa8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 TPTE2Q6XPS3 522 aa8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 NEDD1Q8NHV4 660 aa8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 SEC31BQ9NQW1 1179 aa8.56□□□□□ -1.04
HMGCS1-207ENST00000514610 ESRRAP11474 423 aaPredicted RBP8.55□□□□□ -1.04
HMGCS1-207ENST00000514610 RPS26P11Q5JNZ5 115 aaPredicted RBP8.55□□□□□ -1.04
HMGCS1-207ENST00000514610 MSL1Q68DK7 614 aa8.55□□□□□ -1.04
HMGCS1-207ENST00000514610 METTL16Q86W50 562 aaKnown RBP8.55□□□□□ -1.04
HMGCS1-207ENST00000514610 WFDC8Q8IUA0 241 aa8.55□□□□□ -1.04
HMGCS1-207ENST00000514610 CACTIN-AS1Q8N1I8 211 aa8.55□□□□□ -1.04
HMGCS1-207ENST00000514610 RRAGCQ9HB90 399 aa8.55□□□□□ -1.04
HMGCS1-207ENST00000514610 H3BRJ5 948 aa8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 LINC01387J3KSC0 135 aa8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 SOX1O00570 391 aaPredicted RBP8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 B3GALT4O96024 378 aa8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 CELA3AP09093 270 aa8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 ZNF157P51786 506 aaPredicted RBP8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 C9orf131Q5VYM1 1079 aa8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 LINC00114Q6XXX2 140 aa8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 TRIM11Q96F44 468 aa8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 NECAB3Q96P71 396 aaPredicted RBP8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 TRIM56Q9BRZ2 755 aaKnown RBP8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 PPME1Q9Y570 386 aa8.54□□□□□ -1.04
HMGCS1-207ENST00000514610 ENC1O14682 589 aa8.53□□□□□ -1.04
HMGCS1-207ENST00000514610 TM4SF5O14894 197 aa8.53□□□□□ -1.04
HMGCS1-207ENST00000514610 ZNF76P36508 570 aa8.53□□□□□ -1.04
HMGCS1-207ENST00000514610 IKBKEQ14164 716 aa8.53□□□□□ -1.04
HMGCS1-207ENST00000514610 DMRTC2Q8IXT2 367 aaPredicted RBP8.53□□□□□ -1.04
HMGCS1-207ENST00000514610 ZFYVE1Q9HBF4 777 aa8.53□□□□□ -1.04
HMGCS1-207ENST00000514610 ENAMQ9NRM1 1142 aa8.53□□□□□ -1.04
HMGCS1-207ENST00000514610 METTL5Q9NRN9 209 aaKnown RBP8.53□□□□□ -1.04
HMGCS1-207ENST00000514610 PAGE1O75459 146 aa8.52□□□□□ -1.05
HMGCS1-207ENST00000514610 CABP4P57796 275 aa8.52□□□□□ -1.05
HMGCS1-207ENST00000514610 GPN3Q9UHW5 284 aaPredicted RBP8.52□□□□□ -1.05
HMGCS1-207ENST00000514610 DEAF1O75398 565 aaPredicted RBP8.51□□□□□ -1.05
HMGCS1-207ENST00000514610 SETDB1Q15047 1291 aa8.51□□□□□ -1.05
HMGCS1-207ENST00000514610 CCDC85BQ15834 202 aaPredicted RBP8.51□□□□□ -1.05
HMGCS1-207ENST00000514610 RNF34Q969K3 372 aa8.51□□□□□ -1.05
HMGCS1-207ENST00000514610 CARD10Q9BWT7 1032 aa8.51□□□□□ -1.05
HMGCS1-207ENST00000514610 FAM177BA6PVY3 158 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 FSCN2O14926 492 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 RAD51AP2Q09MP3 1159 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 SV2BQ7L1I2 683 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 ERMP1Q7Z2K6 904 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 GALNT11Q8NCW6 608 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 STK35Q8TDR2 534 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 SLC7A3Q8WY07 619 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 NOC4LQ9BVI4 516 aaKnown RBP8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 CEP44Q9C0F1 390 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 COPRSQ9NQ92 184 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 TMEM39AQ9NV64 488 aa8.5□□□□□ -1.05
HMGCS1-207ENST00000514610 F6X3S4 739 aa8.49□□□□□ -1.05
HMGCS1-207ENST00000514610 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
HMGCS1-207ENST00000514610 MAP3K11Q16584 847 aa8.49□□□□□ -1.05
HMGCS1-207ENST00000514610 RASIP1Q5U651 963 aa8.49□□□□□ -1.05
HMGCS1-207ENST00000514610 NT5DC4Q86YG4 428 aa8.49□□□□□ -1.05
HMGCS1-207ENST00000514610 TRAPPC3LQ5T215 181 aa8.48□□□□□ -1.05
HMGCS1-207ENST00000514610 WNT8BQ93098 351 aa8.48□□□□□ -1.05
HMGCS1-207ENST00000514610 KLHDC7BQ96G42 594 aa8.48□□□□□ -1.05
HMGCS1-207ENST00000514610 NRSN2Q9GZP1 204 aa8.48□□□□□ -1.05
HMGCS1-207ENST00000514610 SOX17Q9H6I2 414 aaPredicted RBP8.48□□□□□ -1.05
HMGCS1-207ENST00000514610 GGT7Q9UJ14 662 aa8.48□□□□□ -1.05
HMGCS1-207ENST00000514610 ADAMTS8Q9UP79 889 aa8.48□□□□□ -1.05
HMGCS1-207ENST00000514610 CNTNAP5Q8WYK1 1306 aa8.48□□□□□ -1.05
HMGCS1-207ENST00000514610 A0A0A0MRY4 1105 aa8.47□□□□□ -1.05
HMGCS1-207ENST00000514610 GSK3AP49840 483 aa8.47□□□□□ -1.05
HMGCS1-207ENST00000514610 C19orf57Q0VDD7 668 aa8.47□□□□□ -1.05
HMGCS1-207ENST00000514610 ZNF394Q53GI3 561 aa8.47□□□□□ -1.05
HMGCS1-207ENST00000514610 HS2ST1Q7LGA3 356 aa8.47□□□□□ -1.05
HMGCS1-207ENST00000514610 PLVAPQ9BX97 442 aa8.47□□□□□ -1.05
HMGCS1-207ENST00000514610 OSGEPQ9NPF4 335 aa8.47□□□□□ -1.05
HMGCS1-207ENST00000514610 KBTBD4Q9NVX7 518 aa8.47□□□□□ -1.05
HMGCS1-207ENST00000514610 PCDHGB7Q9Y5F8 929 aa8.47□□□□□ -1.05
HMGCS1-207ENST00000514610 FAM229AH3BQW9 127 aa8.46□□□□□ -1.06
HMGCS1-207ENST00000514610 GNB5O14775 395 aa8.46□□□□□ -1.06
HMGCS1-207ENST00000514610 ADAM11O75078 769 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms