RNA–Protein interactions for RNA: ENST00000512805.5

RACK1-227, Transcript of receptor for activated C kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACK1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-227ENST00000512805 FZD1Q9UP38 647 aa13.6□□□□□ -0.23
RACK1-227ENST00000512805 COL2A1P02458 1487 aaPredicted RBP13.6□□□□□ -0.23
RACK1-227ENST00000512805 IL16Q14005 1332 aa13.59□□□□□ -0.23
RACK1-227ENST00000512805 CHL1O00533 1208 aa13.59□□□□□ -0.23
RACK1-227ENST00000512805 KIF22Q14807 665 aa13.59□□□□□ -0.23
RACK1-227ENST00000512805 MS4A4AQ96JQ5 239 aa13.59□□□□□ -0.23
RACK1-227ENST00000512805 CDX2Q99626 313 aaPredicted RBP13.59□□□□□ -0.23
RACK1-227ENST00000512805 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
RACK1-227ENST00000512805 GPSM2P81274 684 aa13.58□□□□□ -0.24
RACK1-227ENST00000512805 LMOD3Q0VAK6 560 aa13.58□□□□□ -0.24
RACK1-227ENST00000512805 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.24
RACK1-227ENST00000512805 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.24
RACK1-227ENST00000512805 TBC1D16Q8TBP0 767 aa13.58□□□□□ -0.24
RACK1-227ENST00000512805 FAM161BQ96MY7 647 aa13.58□□□□□ -0.24
RACK1-227ENST00000512805 UTP14AQ9BVJ6 771 aaKnown RBP13.58□□□□□ -0.24
RACK1-227ENST00000512805 ZC3H12CQ9C0D7 883 aaKnown RBP13.58□□□□□ -0.24
RACK1-227ENST00000512805 MBIPQ9NS73 344 aa13.58□□□□□ -0.24
RACK1-227ENST00000512805 ZMYND8Q9ULU4 1186 aaPredicted RBP13.58□□□□□ -0.24
RACK1-227ENST00000512805 RIPOR2Q9Y4F9 1068 aa13.58□□□□□ -0.24
RACK1-227ENST00000512805 E9PSI1 815 aa13.57□□□□□ -0.24
RACK1-227ENST00000512805 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
RACK1-227ENST00000512805 KIF6Q6ZMV9 814 aa13.57□□□□□ -0.24
RACK1-227ENST00000512805 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
RACK1-227ENST00000512805 UBE2OQ9C0C9 1292 aaKnown RBP13.57□□□□□ -0.24
RACK1-227ENST00000512805 IFT57Q9NWB7 429 aa13.57□□□□□ -0.24
RACK1-227ENST00000512805 SRRDQ9UH36 339 aa13.57□□□□□ -0.24
RACK1-227ENST00000512805 PPP1R12BO60237 982 aaPredicted RBP13.56□□□□□ -0.24
RACK1-227ENST00000512805 TLR2O60603 784 aa13.56□□□□□ -0.24
RACK1-227ENST00000512805 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
RACK1-227ENST00000512805 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
RACK1-227ENST00000512805 ZBTB3Q9H5J0 574 aa13.56□□□□□ -0.24
RACK1-227ENST00000512805 COL1A1P02452 1464 aaPredicted RBP13.56□□□□□ -0.24
RACK1-227ENST00000512805 UBXN2AP68543 259 aa13.56□□□□□ -0.24
RACK1-227ENST00000512805 C7orf61Q8IZ16 206 aa13.56□□□□□ -0.24
RACK1-227ENST00000512805 BRI3BPQ8WY22 251 aa13.56□□□□□ -0.24
RACK1-227ENST00000512805 TRIM47Q96LD4 638 aa13.56□□□□□ -0.24
RACK1-227ENST00000512805 FAM205AQ6ZU69 1335 aa13.55□□□□□ -0.24
RACK1-227ENST00000512805 BDP1A6H8Y1 2624 aa13.55□□□□□ -0.24
RACK1-227ENST00000512805 HCLS1P14317 486 aaPredicted RBP13.55□□□□□ -0.24
RACK1-227ENST00000512805 TAF7Q15545 349 aaPredicted RBP13.55□□□□□ -0.24
RACK1-227ENST00000512805 ZNF697Q5TEC3 545 aa13.55□□□□□ -0.24
RACK1-227ENST00000512805 TSPYL6Q8N831 410 aa13.55□□□□□ -0.24
RACK1-227ENST00000512805 PAWRQ96IZ0 340 aaKnown RBP13.55□□□□□ -0.24
RACK1-227ENST00000512805 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.55□□□□□ -0.24
RACK1-227ENST00000512805 LAS1LQ9Y4W2 734 aaKnown RBP13.55□□□□□ -0.24
RACK1-227ENST00000512805 CDH23Q9H251 3354 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 USP17L3A6NCW0 530 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 USP17L4A6NCW7 530 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 CTGFP29279 349 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 EXOSC9Q06265 439 aaKnown RBP13.54□□□□□ -0.24
RACK1-227ENST00000512805 USP17L1Q7RTZ2 530 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 CRISPLD2Q9H0B8 497 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 UNC93B1Q9H1C4 597 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 PODXL2Q9NZ53 605 aa13.54□□□□□ -0.24
RACK1-227ENST00000512805 SYN1P17600 705 aa13.53□□□□□ -0.24
RACK1-227ENST00000512805 HOXD10P28358 340 aa13.53□□□□□ -0.24
RACK1-227ENST00000512805 MMP14P50281 582 aa13.53□□□□□ -0.24
RACK1-227ENST00000512805 GNAI1P63096 354 aa13.53□□□□□ -0.24
RACK1-227ENST00000512805 NECAB2Q7Z6G3 386 aa13.53□□□□□ -0.24
RACK1-227ENST00000512805 HELBQ8NG08 1087 aaPredicted RBP13.53□□□□□ -0.24
RACK1-227ENST00000512805 RAET1EQ8TD07 263 aa13.53□□□□□ -0.24
RACK1-227ENST00000512805 CELF1Q92879 486 aaKnown RBP13.53□□□□□ -0.24
RACK1-227ENST00000512805 G3V3G9 751 aa13.52□□□□□ -0.25
RACK1-227ENST00000512805 TFRCP02786 760 aaKnown RBP13.52□□□□□ -0.25
RACK1-227ENST00000512805 OSBPP22059 807 aa13.52□□□□□ -0.25
RACK1-227ENST00000512805 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.25
RACK1-227ENST00000512805 ANKRD13AQ8IZ07 590 aa13.52□□□□□ -0.25
RACK1-227ENST00000512805 OGFOD1Q8N543 542 aa13.52□□□□□ -0.25
RACK1-227ENST00000512805 ZBED3Q96IU2 234 aaPredicted RBP13.52□□□□□ -0.25
RACK1-227ENST00000512805 DEFB129Q9H1M3 183 aa13.52□□□□□ -0.25
RACK1-227ENST00000512805 SEMA6BQ9H3T3 888 aa13.52□□□□□ -0.25
RACK1-227ENST00000512805 USP2O75604 605 aaPredicted RBP13.51□□□□□ -0.25
RACK1-227ENST00000512805 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
RACK1-227ENST00000512805 EIF4A1P60842 406 aaKnown RBP13.51□□□□□ -0.25
RACK1-227ENST00000512805 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
RACK1-227ENST00000512805 PODNQ7Z5L7 613 aa13.51□□□□□ -0.25
RACK1-227ENST00000512805 OPTNQ96CV9 577 aa13.51□□□□□ -0.25
RACK1-227ENST00000512805 C1QTNF1Q9BXJ1 281 aa13.51□□□□□ -0.25
RACK1-227ENST00000512805 ZCCHC17Q9NP64 241 aaKnown RBP13.51□□□□□ -0.25
RACK1-227ENST00000512805 BIN2Q9UBW5 565 aaPredicted RBP13.51□□□□□ -0.25
RACK1-227ENST00000512805 TSPYL4Q9UJ04 414 aa13.51□□□□□ -0.25
RACK1-227ENST00000512805 CCL15-CCL14A0A0B4J2E2 113 aa13.5□□□□□ -0.25
RACK1-227ENST00000512805 WDHD1O75717 1129 aaPredicted RBP13.5□□□□□ -0.25
RACK1-227ENST00000512805 SASH1O94885 1247 aa13.5□□□□□ -0.25
RACK1-227ENST00000512805 PSMC4P43686 418 aa13.5□□□□□ -0.25
RACK1-227ENST00000512805 IREB2P48200 963 aaKnown RBP13.5□□□□□ -0.25
RACK1-227ENST00000512805 CCL15Q16663 113 aa13.5□□□□□ -0.25
RACK1-227ENST00000512805 MYLIPQ8WY64 445 aa13.5□□□□□ -0.25
RACK1-227ENST00000512805 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
RACK1-227ENST00000512805 PPP2R3BQ9Y5P8 575 aa13.5□□□□□ -0.25
RACK1-227ENST00000512805 MUC6Q6W4X9 2439 aa13.5□□□□□ -0.25
RACK1-227ENST00000512805 ELL2O00472 640 aaPredicted RBP13.49□□□□□ -0.25
RACK1-227ENST00000512805 VAMP4O75379 141 aa13.49□□□□□ -0.25
RACK1-227ENST00000512805 GTF2A2P52657 109 aa13.49□□□□□ -0.25
RACK1-227ENST00000512805 C17orf99Q6UX52 265 aa13.49□□□□□ -0.25
RACK1-227ENST00000512805 ALYREFQ86V81 257 aaKnown RBP13.49□□□□□ -0.25
RACK1-227ENST00000512805 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
RACK1-227ENST00000512805 PAK6Q9NQU5 681 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms