RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 PTMSP20962 102 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 RFC4P35249 363 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 TIMM10P62072 90 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 NUCB2P80303 420 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 CUL4AQ13619 759 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 RAB3GAP1Q15042 981 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 NECTIN1Q15223 517 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 CCDC152Q4G0S7 254 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 METTL24Q5JXM2 366 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 FAM227BQ96M60 508 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 HELLSQ9NRZ9 838 aa15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 NIP7Q9Y221 180 aaKnown RBP eCLIP15.73■□□□□ 0.11
DEPDC1B-206ENST00000512452 A0A0D9SFI3 127 aa15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 FRAT2O75474 233 aaPredicted RBP15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 ZFYP08048 801 aaPredicted RBP15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 ATP2B3Q16720 1220 aa15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 TSGA10IPQ3SY00 556 aa15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 MAP1SQ66K74 1059 aaPredicted RBP15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 SYNE4Q8N205 404 aa15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 VGLL2Q8N8G2 317 aa15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 SPRYD3Q8NCJ5 442 aa15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 XAGE2Q96GT9 111 aa15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 DNAJC2Q99543 621 aaKnown RBP15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 CNNM1Q9NRU3 951 aa15.72■□□□□ 0.11
DEPDC1B-206ENST00000512452 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 PSMA5P28066 241 aa15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 PTH1RQ03431 593 aa15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 MCMDC2Q4G0Z9 681 aa15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 TTC39AQ5SRH9 613 aa15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 GORABQ5T7V8 394 aa15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 USPL1Q5W0Q7 1092 aa15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 CLEC17AQ6ZS10 378 aa15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 NARFQ9UHQ1 456 aa15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 RBM8AQ9Y5S9 174 aaKnown RBP15.71■□□□□ 0.11
DEPDC1B-206ENST00000512452 TAF5LO75529 589 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 PDE8BO95263 885 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 KRT32Q14532 448 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 TMX3Q96JJ7 454 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 TTC14Q96N46 770 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 GBP4Q96PP9 640 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 NYXQ9GZU5 481 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 ZSWIM6Q9HCJ5 1215 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 ARAP2Q8WZ64 1704 aa15.7■□□□□ 0.1
DEPDC1B-206ENST00000512452 DDX11L8A8MPP1 907 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 UQCRFS1P1P0C7P4 283 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 MCM4P33991 863 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 KCNJ4P48050 445 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 SF3B3Q15393 1217 aaKnown RBP15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 PUM3Q15397 648 aaKnown RBP15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 SLC10A5Q5PT55 438 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 ZMYM1Q5SVZ6 1142 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 VPS53Q5VIR6 699 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 CREB3L3Q68CJ9 461 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 RASEFQ8IZ41 740 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 LPIN2Q92539 896 aa15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 L3MBTL3Q96JM7 780 aaPredicted RBP15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 RPAP1Q9BWH6 1393 aaPredicted RBP15.69■□□□□ 0.1
DEPDC1B-206ENST00000512452 SCN4AP35499 1836 aa15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 GOLIM4O00461 696 aa15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 RNF113AO15541 343 aaKnown RBP15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 DDR1Q08345 913 aa15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 TTF1Q15361 905 aaPredicted RBP15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 PRPF40BQ6NWY9 871 aaKnown RBP15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 DDX46Q7L014 1031 aaKnown RBP15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 EDC3Q96F86 508 aaKnown RBP15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 CDC5LQ99459 802 aaKnown RBP15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 DSCC1Q9BVC3 393 aa15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 CYP46A1Q9Y6A2 500 aa15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 DICER1Q9UPY3 1922 aaKnown RBP15.68■□□□□ 0.1
DEPDC1B-206ENST00000512452 SLC27A2O14975 620 aa15.67■□□□□ 0.1
DEPDC1B-206ENST00000512452 HCLS1P14317 486 aaPredicted RBP15.67■□□□□ 0.1
DEPDC1B-206ENST00000512452 FGFR2P21802 821 aa15.67■□□□□ 0.1
DEPDC1B-206ENST00000512452 ADORA1P30542 326 aa15.67■□□□□ 0.1
DEPDC1B-206ENST00000512452 IGHMBP2P38935 993 aaKnown RBP15.67■□□□□ 0.1
DEPDC1B-206ENST00000512452 ZSCAN25Q6NSZ9 544 aa15.67■□□□□ 0.1
DEPDC1B-206ENST00000512452 ZSCAN31Q96LW9 406 aaPredicted RBP15.67■□□□□ 0.1
DEPDC1B-206ENST00000512452 MPHOSPH8Q99549 860 aa15.67■□□□□ 0.1
DEPDC1B-206ENST00000512452 CYP2E1P05181 493 aaPredicted RBP15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 SLC5A1P13866 664 aa15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 ARID4AP29374 1257 aaPredicted RBP15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 RUFY3Q7L099 469 aa15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 ZNF589Q86UQ0 364 aaPredicted RBP15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 PNMA8AQ86V59 439 aaPredicted RBP15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 JAKMIP1Q96N16 626 aaKnown RBP15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 HACL1Q9UJ83 578 aa15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 LIMCH1Q9UPQ0 1083 aa15.66■□□□□ 0.1
DEPDC1B-206ENST00000512452 ZPR1O75312 459 aa15.65■□□□□ 0.1
DEPDC1B-206ENST00000512452 CASTP20810 708 aaKnown RBP15.65■□□□□ 0.1
DEPDC1B-206ENST00000512452 EPHX2P34913 555 aa15.65■□□□□ 0.1
DEPDC1B-206ENST00000512452 ANKRD1Q15327 319 aa15.65■□□□□ 0.1
DEPDC1B-206ENST00000512452 TNPO1Q92973 898 aaKnown RBP15.65■□□□□ 0.1
DEPDC1B-206ENST00000512452 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.65■□□□□ 0.1
DEPDC1B-206ENST00000512452 CIAPIN1Q6FI81 312 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms