RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ZSWIM8A7E2V4 1837 aa13.22□□□□□ -0.29
PDLIM5-217ENST00000512274 CACNA1FO60840 1977 aa13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 SZT2Q5T011 3432 aa13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 ATP5J2-PTCD1G3V325 749 aa13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 PLIN1O60240 522 aa13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 IRX6P78412 446 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 OGFOD1Q8N543 542 aa13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 C8orf58Q8NAV2 365 aa13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 EXOC6Q8TAG9 804 aa13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 LAMB1P07942 1786 aa13.21□□□□□ -0.29
PDLIM5-217ENST00000512274 ECM2O94769 699 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-217ENST00000512274 ZBTB48P10074 688 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-217ENST00000512274 GJA5P36382 358 aa13.2□□□□□ -0.3
PDLIM5-217ENST00000512274 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
PDLIM5-217ENST00000512274 CRBNQ96SW2 442 aa13.2□□□□□ -0.3
PDLIM5-217ENST00000512274 PTPN18Q99952 460 aa13.2□□□□□ -0.3
PDLIM5-217ENST00000512274 BRCA2P51587 3418 aa13.2□□□□□ -0.3
PDLIM5-217ENST00000512274 PTPRCP08575 1304 aa13.19□□□□□ -0.3
PDLIM5-217ENST00000512274 C20orf194Q5TEA3 1177 aa13.19□□□□□ -0.3
PDLIM5-217ENST00000512274 APOBEC3FQ8IUX4 373 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-217ENST00000512274 PRO3102Q9H379 93 aa13.19□□□□□ -0.3
PDLIM5-217ENST00000512274 CHMP4BQ9H444 224 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-217ENST00000512274 ZNF646O15015 1829 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-217ENST00000512274 IRS4O14654 1257 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-217ENST00000512274 TRIM27P14373 513 aa13.18□□□□□ -0.3
PDLIM5-217ENST00000512274 MTFR1Q15390 333 aa13.18□□□□□ -0.3
PDLIM5-217ENST00000512274 PODNQ7Z5L7 613 aa13.18□□□□□ -0.3
PDLIM5-217ENST00000512274 DZIP1LQ8IYY4 767 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-217ENST00000512274 SHISA4Q96DD7 197 aa13.18□□□□□ -0.3
PDLIM5-217ENST00000512274 CCDC85AQ96PX6 553 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-217ENST00000512274 COL25A1Q9BXS0 654 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-217ENST00000512274 PPP1R12BO60237 982 aaPredicted RBP13.17□□□□□ -0.3
PDLIM5-217ENST00000512274 MVPQ14764 893 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-217ENST00000512274 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
PDLIM5-217ENST00000512274 DACT2Q5SW24 774 aa13.17□□□□□ -0.3
PDLIM5-217ENST00000512274 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-217ENST00000512274 ARHGAP39Q9C0H5 1083 aa13.17□□□□□ -0.3
PDLIM5-217ENST00000512274 TAF1CQ15572 869 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-217ENST00000512274 MAP3K11Q16584 847 aa13.16□□□□□ -0.3
PDLIM5-217ENST00000512274 KIAA0825Q8IV33 1275 aa13.16□□□□□ -0.3
PDLIM5-217ENST00000512274 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
PDLIM5-217ENST00000512274 HTATIP2Q9BUP3 242 aa13.16□□□□□ -0.3
PDLIM5-217ENST00000512274 DEFB129Q9H1M3 183 aa13.16□□□□□ -0.3
PDLIM5-217ENST00000512274 DDX19BQ9UMR2 479 aa13.16□□□□□ -0.3
PDLIM5-217ENST00000512274 NR2E3Q9Y5X4 410 aa13.16□□□□□ -0.3
PDLIM5-217ENST00000512274 SSC5DA1L4H1 1573 aa13.15□□□□□ -0.3
PDLIM5-217ENST00000512274 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-217ENST00000512274 ATP2B4P23634 1241 aa13.15□□□□□ -0.3
PDLIM5-217ENST00000512274 CCDC30Q5VVM6 783 aa13.15□□□□□ -0.3
PDLIM5-217ENST00000512274 Q7L0L9 218 aa13.15□□□□□ -0.3
PDLIM5-217ENST00000512274 ISCA1Q9BUE6 129 aa13.15□□□□□ -0.3
PDLIM5-217ENST00000512274 ZFYVE28Q9HCC9 887 aa13.15□□□□□ -0.3
PDLIM5-217ENST00000512274 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-217ENST00000512274 SPEF2Q9C093 1822 aa13.15□□□□□ -0.3
PDLIM5-217ENST00000512274 XDHP47989 1333 aa13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 ZBTB7BO15156 539 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 RLBP1P12271 317 aa13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 DEFB123Q8N688 67 aa13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 JARID2Q92833 1246 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 CLUAP1Q96AJ1 413 aa13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 ELP3Q9H9T3 547 aa13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 STAP2Q9UGK3 403 aa13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 PCDHAC2Q9Y5I4 1007 aa13.14□□□□□ -0.31
PDLIM5-217ENST00000512274 CEP290O15078 2479 aa13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 OTOFQ9HC10 1997 aa13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 USP2O75604 605 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 KIF22Q14807 665 aa13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 NBPF12Q5TAG4 269 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 COL6A3P12111 3177 aa13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 ECM29Q5VYK3 1845 aa13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
PDLIM5-217ENST00000512274 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 STRIP1Q5VSL9 837 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 TTLL5Q6EMB2 1281 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 CENPQQ7L2Z9 268 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 ANKRD18AQ8IVF6 992 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 PANK1Q8TE04 598 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 BRI3BPQ8WY22 251 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 CHPF2Q9P2E5 772 aa13.12□□□□□ -0.31
PDLIM5-217ENST00000512274 CCL15-CCL14A0A0B4J2E2 113 aa13.11□□□□□ -0.31
PDLIM5-217ENST00000512274 A0A1W2PPC1 479 aa13.11□□□□□ -0.31
PDLIM5-217ENST00000512274 CCL15Q16663 113 aa13.11□□□□□ -0.31
PDLIM5-217ENST00000512274 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
PDLIM5-217ENST00000512274 TXNRD3Q86VQ6 643 aa13.11□□□□□ -0.31
PDLIM5-217ENST00000512274 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
PDLIM5-217ENST00000512274 FAM43AQ8N2R8 423 aa13.11□□□□□ -0.31
PDLIM5-217ENST00000512274 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
PDLIM5-217ENST00000512274 COL1A1P02452 1464 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms