RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 UNCXA6NJT0 531 aa11.98□□□□□ -0.49
NUP54-211ENST00000512151 GJA8P48165 433 aa11.98□□□□□ -0.49
NUP54-211ENST00000512151 LACTBP83111 547 aaPredicted RBP11.98□□□□□ -0.49
NUP54-211ENST00000512151 ARHGEF6Q15052 776 aa11.98□□□□□ -0.49
NUP54-211ENST00000512151 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
NUP54-211ENST00000512151 PLBD2Q8NHP8 589 aa11.98□□□□□ -0.49
NUP54-211ENST00000512151 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
NUP54-211ENST00000512151 MED23Q9ULK4 1368 aa11.98□□□□□ -0.49
NUP54-211ENST00000512151 MYO3BQ8WXR4 1341 aa11.97□□□□□ -0.49
NUP54-211ENST00000512151 UNC80Q8N2C7 3258 aa11.97□□□□□ -0.49
NUP54-211ENST00000512151 KLRK1P26718 216 aa11.97□□□□□ -0.49
NUP54-211ENST00000512151 PPP2R1AP30153 589 aa11.97□□□□□ -0.49
NUP54-211ENST00000512151 JARID2Q92833 1246 aaPredicted RBP11.97□□□□□ -0.49
NUP54-211ENST00000512151 CHPF2Q9P2E5 772 aa11.97□□□□□ -0.49
NUP54-211ENST00000512151 ALPK3Q96L96 1907 aa11.97□□□□□ -0.49
NUP54-211ENST00000512151 CCL15-CCL14A0A0B4J2E2 113 aa11.96□□□□□ -0.49
NUP54-211ENST00000512151 CLRN2A0PK11 232 aa11.96□□□□□ -0.49
NUP54-211ENST00000512151 FARP2O94887 1054 aaPredicted RBP11.96□□□□□ -0.49
NUP54-211ENST00000512151 GJB1P08034 283 aa11.96□□□□□ -0.49
NUP54-211ENST00000512151 CCL5P13501 91 aa11.96□□□□□ -0.49
NUP54-211ENST00000512151 IREB2P48200 963 aaKnown RBP11.96□□□□□ -0.49
NUP54-211ENST00000512151 CCL15Q16663 113 aa11.96□□□□□ -0.49
NUP54-211ENST00000512151 GPR153Q6NV75 609 aa11.96□□□□□ -0.49
NUP54-211ENST00000512151 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.49
NUP54-211ENST00000512151 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.96□□□□□ -0.49
NUP54-211ENST00000512151 ANKRD13AQ8IZ07 590 aa11.96□□□□□ -0.49
NUP54-211ENST00000512151 ZNF804BA4D1E1 1349 aa11.96□□□□□ -0.5
NUP54-211ENST00000512151 TRIM28Q13263 835 aaKnown RBP11.95□□□□□ -0.5
NUP54-211ENST00000512151 TTLL5Q6EMB2 1281 aa11.95□□□□□ -0.5
NUP54-211ENST00000512151 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.95□□□□□ -0.5
NUP54-211ENST00000512151 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
NUP54-211ENST00000512151 CERS5Q8N5B7 392 aa11.95□□□□□ -0.5
NUP54-211ENST00000512151 NKX2-3Q8TAU0 364 aa11.95□□□□□ -0.5
NUP54-211ENST00000512151 COA1Q9GZY4 146 aa11.95□□□□□ -0.5
NUP54-211ENST00000512151 PRDM6Q9NQX0 595 aa11.95□□□□□ -0.5
NUP54-211ENST00000512151 PPP2R3BQ9Y5P8 575 aa11.95□□□□□ -0.5
NUP54-211ENST00000512151 ECM29Q5VYK3 1845 aa11.95□□□□□ -0.5
NUP54-211ENST00000512151 EVI5O60447 810 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 TLR2O60603 784 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 DLGAP5Q15398 846 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 SUPT20HL1Q3ZLR7 823 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 CCDC152Q4G0S7 254 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 ANKRD18AQ8IVF6 992 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 ZBTB38Q8NAP3 1195 aaPredicted RBP11.94□□□□□ -0.5
NUP54-211ENST00000512151 TRIM47Q96LD4 638 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 GDF15Q99988 308 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 SPEF2Q9C093 1822 aa11.94□□□□□ -0.5
NUP54-211ENST00000512151 GRK4P32298 578 aa11.93□□□□□ -0.5
NUP54-211ENST00000512151 MMP14P50281 582 aa11.93□□□□□ -0.5
NUP54-211ENST00000512151 GTF2IP78347 998 aa11.93□□□□□ -0.5
NUP54-211ENST00000512151 MTMR14Q8NCE2 650 aa11.93□□□□□ -0.5
NUP54-211ENST00000512151 U2AF1L4Q8WU68 220 aaKnown RBP11.93□□□□□ -0.5
NUP54-211ENST00000512151 PRMT6Q96LA8 375 aaPredicted RBP11.93□□□□□ -0.5
NUP54-211ENST00000512151 RNF208Q9H0X6 261 aa11.93□□□□□ -0.5
NUP54-211ENST00000512151 UNC93B1Q9H1C4 597 aa11.93□□□□□ -0.5
NUP54-211ENST00000512151 SRRDQ9UH36 339 aa11.93□□□□□ -0.5
NUP54-211ENST00000512151 RIPOR2Q9Y4F9 1068 aa11.93□□□□□ -0.5
NUP54-211ENST00000512151 BTBD19C9JJ37 291 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 OSBPP22059 807 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 BCAMP50895 628 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 CCT4P50991 539 aaKnown RBP11.92□□□□□ -0.5
NUP54-211ENST00000512151 GTF2A2P52657 109 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 PRMT2P55345 433 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 VGLL4Q14135 290 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 RASA3Q14644 834 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 KIF22Q14807 665 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 VEZTQ9HBM0 779 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 TTC28Q96AY4 2481 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 PDE8AO60658 829 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 GNRH1P01148 92 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 BMP8BP34820 402 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 ZEB1P37275 1124 aaPredicted RBP11.92□□□□□ -0.5
NUP54-211ENST00000512151 CFAP100Q494V2 611 aa11.92□□□□□ -0.5
NUP54-211ENST00000512151 SPTBN5Q9NRC6 3674 aaKnown RBP11.91□□□□□ -0.5
NUP54-211ENST00000512151 F8W031 263 aaPredicted RBP11.91□□□□□ -0.5
NUP54-211ENST00000512151 PCCAP05165 728 aaPredicted RBP11.91□□□□□ -0.5
NUP54-211ENST00000512151 PSMC4P43686 418 aa11.91□□□□□ -0.5
NUP54-211ENST00000512151 LRIT3Q3SXY7 679 aa11.91□□□□□ -0.5
NUP54-211ENST00000512151 C17orf99Q6UX52 265 aa11.91□□□□□ -0.5
NUP54-211ENST00000512151 RAET1EQ8TD07 263 aa11.91□□□□□ -0.5
NUP54-211ENST00000512151 TEPSINQ96N21 525 aa11.91□□□□□ -0.5
NUP54-211ENST00000512151 BSDC1Q9NW68 430 aaPredicted RBP11.91□□□□□ -0.5
NUP54-211ENST00000512151 CPA4Q9UI42 421 aa11.91□□□□□ -0.5
NUP54-211ENST00000512151 ZMYND8Q9ULU4 1186 aaPredicted RBP11.91□□□□□ -0.5
NUP54-211ENST00000512151 SGPL1O95470 568 aa11.9□□□□□ -0.5
NUP54-211ENST00000512151 GUCD1Q96NT3 240 aa11.9□□□□□ -0.5
NUP54-211ENST00000512151 BABAM1Q9NWV8 329 aa11.9□□□□□ -0.5
NUP54-211ENST00000512151 RAPGEFL1Q9UHV5 662 aa11.9□□□□□ -0.5
NUP54-211ENST00000512151 MYPNQ86TC9 1320 aa11.89□□□□□ -0.51
NUP54-211ENST00000512151 ADGRA2Q96PE1 1338 aa11.89□□□□□ -0.51
NUP54-211ENST00000512151 VCANP13611 3396 aa11.89□□□□□ -0.51
NUP54-211ENST00000512151 NEFMP07197 916 aa11.89□□□□□ -0.51
NUP54-211ENST00000512151 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
NUP54-211ENST00000512151 HDGFL1Q5TGJ6 251 aa11.89□□□□□ -0.51
NUP54-211ENST00000512151 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.51
NUP54-211ENST00000512151 DIS3LQ8TF46 1054 aaKnown RBP11.89□□□□□ -0.51
NUP54-211ENST00000512151 MYD88Q99836 296 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms