RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 POLD1P28340 1107 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 MNX1P50219 401 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 CCZ1BP86790 482 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 CCZ1P86791 482 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 CCDC144BQ3MJ40 725 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 LDLRAD1Q5T700 205 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 AEBP1Q8IUX7 1158 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 CCDC144CPQ8IYA2 1237 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 SSH3Q8TE77 659 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 ZNF775Q96BV0 537 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 SLC26A8Q96RN1 970 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 SYT11Q9BT88 431 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 TOMM70O94826 608 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 SASH1O94885 1247 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 PRPF6O94906 941 aaKnown RBP2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 MCM4P33991 863 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 NTRK3Q16288 839 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 ATG14Q6ZNE5 492 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 PTF1AQ7RTS3 328 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 PLA2G4DQ86XP0 818 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 TICAM2Q86XR7 235 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 IRF2BP1Q8IU81 584 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 CRYGNQ8WXF5 182 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 TTYH3Q9C0H2 523 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 CREBZFQ9NS37 354 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 HPS5Q9UPZ3 1129 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 HPSEQ9Y251 543 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 PLXNA2O75051 1894 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 GRIN2DO15399 1336 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 C1QAP02745 245 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 EHHADHQ08426 723 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 DPYDQ12882 1025 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 KRT28Q7Z3Y7 464 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 TNPO1Q92973 898 aaKnown RBP2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 KIFC2Q96AC6 838 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 PGBD1Q96JS3 809 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 CRAMP1Q96RY5 1269 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 RHOBTB2Q9BYZ6 727 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 KCNH6Q9H252 994 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 MICAL3Q7RTP6 2002 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 POLRMTO00411 1230 aaKnown RBP2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 CACNB1Q02641 598 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 GLIPR1L2Q4G1C9 344 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 AXDND1Q5T1B0 1012 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 INTS5Q6P9B9 1019 aaKnown RBP2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 CLUAP1Q96AJ1 413 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 MBIPQ9NS73 344 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 EURLQ9NYK6 297 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 XDHP47989 1333 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 POTEIP0CG38 1075 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 AMPD2Q01433 879 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 ADCK5Q3MIX3 580 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 TBC1D9Q6ZT07 1266 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 TP53BP1Q12888 1972 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 PIEZO2Q9H5I5 2752 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 APAF1O14727 1248 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 CDC27P30260 824 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 EVX2Q03828 476 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 L1TD1Q5T7N2 865 aaKnown RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 SMARCC2Q8TAQ2 1214 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 RTN4Q9NQC3 1192 aaKnown RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 KIAA1522Q9P206 1035 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 REXO2Q9Y3B8 237 aaKnown RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 DNAH7Q8WXX0 4024 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 AGPSO00116 658 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 SMARCA5O60264 1052 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 OFD1O75665 1012 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 CAPNS1P04632 268 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 MOGSQ13724 837 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 PIAS4Q8N2W9 510 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 TMEM57Q8N5G2 664 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 VWCEQ96DN2 955 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 P2RX7Q99572 595 aaKnown RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 SPON1Q9HCB6 807 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 CA12O43570 354 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 ST18O60284 1047 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 RTN2O75298 545 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 C1RP00736 705 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 FNTAP49354 379 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 CSRP3P50461 194 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 MAP3K21Q5TCX8 1036 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 KCNV1Q6PIU1 500 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 RUFY3Q7L099 469 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 NUDT16Q96DE0 195 aaKnown RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 CCDC136Q96JN2 1154 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 BTBD7Q9P203 1132 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 LOC100996750A0A140TA64 210 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 FGRP09769 529 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 ZNF18P17022 549 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 TMEM63BQ5T3F8 832 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 CENPQQ7L2Z9 268 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 KRTAP4-6Q9BYQ5 205 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 CTNNA3Q9UI47 895 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 CPAMD8Q8IZJ3 1885 aa2.11□□□□□ -2.07
TRAPPC13-211ENST00000512009 FBN1P35555 2871 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 ANKRD33BA6NCL7 494 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 MAP2K7O14733 419 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 MAP2K2P36507 400 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 NOP2P46087 812 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 BAG6P46379 1132 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms