RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ELMSAN1Q6PJG2 1045 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 CEP120Q8N960 986 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 ASAP3Q8TDY4 903 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 ZKSCAN3Q9BRR0 538 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 OSBPL7Q9BZF2 842 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 RASSF4Q9H2L5 321 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 TRAK1Q9UPV9 953 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 SMNDC1O75940 238 aaKnown RBP eCLIP5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 FCGRTP55899 365 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 MRPL58Q14197 206 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 PRRT3Q5FWE3 981 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 PERM1Q5SV97 790 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 ARTNQ5T4W7 220 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 C8orf86Q6ZUL3 223 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 CACTIN-AS1Q8N1I8 211 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 DTWD1Q8N5C7 304 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 TMEM87AQ8NBN3 555 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 NUDT8Q8WV74 236 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 PLD4Q96BZ4 506 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 HHIPQ96QV1 700 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 PBX4Q9BYU1 374 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 BACH2Q9BYV9 841 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 SMG9Q9H0W8 520 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 JPH1Q9HDC5 661 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 DZANK1Q9NVP4 752 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 FAM8A1Q9UBU6 413 aa5.62□□□□□ -1.51
TRAPPC11-207ENST00000511409 FAM177BA6PVY3 158 aa5.61□□□□□ -1.51
TRAPPC11-207ENST00000511409 PDE2AO00408 941 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC11-207ENST00000511409 DYRK3O43781 588 aa5.61□□□□□ -1.51
TRAPPC11-207ENST00000511409 RECKO95980 971 aa5.61□□□□□ -1.51
TRAPPC11-207ENST00000511409 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
TRAPPC11-207ENST00000511409 DTHD1Q6ZMT9 781 aa5.61□□□□□ -1.51
TRAPPC11-207ENST00000511409 SRCIN1Q9C0H9 1055 aa5.61□□□□□ -1.51
TRAPPC11-207ENST00000511409 ZFP64Q9NPA5 681 aa5.61□□□□□ -1.51
TRAPPC11-207ENST00000511409 SCO2A0A1W2PP80 73 aa5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 METTL12A8MUP2 240 aa5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 VAMP1P23763 118 aa5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 GSTT1P30711 240 aa5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 TRIM28Q13263 835 aaKnown RBP5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 MSL1Q68DK7 614 aa5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 GDF6Q6KF10 455 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 TMEM102Q8N9M5 508 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 NACC1Q96RE7 527 aa5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 LACRTQ9GZZ8 138 aa5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 AKAP2Q9Y2D5 859 aa5.6□□□□□ -1.51
TRAPPC11-207ENST00000511409 A0A0A0MRY4 1105 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 TMEM238LA0A1B0GVL6 79 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 ELNP15502 786 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 SPRED3Q2MJR0 410 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 CCNJLQ8IV13 435 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 GLIS3Q8NEA6 775 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 NXPE3Q969Y0 559 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 CRELD1Q96HD1 420 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 TCF12Q99081 682 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 POP1Q99575 1024 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 ABCB6Q9NP58 842 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 TPSG1Q9NRR2 321 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 TTF2Q9UNY4 1162 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 TRIM33Q9UPN9 1127 aa5.59□□□□□ -1.51
TRAPPC11-207ENST00000511409 NFKBIEO00221 500 aa5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 CTSHP09668 335 aa5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 TCF3P15923 654 aa5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 PTPRAP18433 802 aa5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 GRIA4P48058 902 aa5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 RAC1P63000 192 aa5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 TRAPPC3LQ5T215 181 aa5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 MEI1Q5TIA1 1274 aa5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 FMR1NBQ8N0W7 255 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 SRA1Q9HD15 236 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-207ENST00000511409 A0A096LPE4 126 aa5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 A0A1W2PPZ6 126 aa5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 C9orf172C9J069 976 aa5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 SCAMP3O14828 347 aaKnown RBP5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 APBA3O96018 575 aa5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 XRCC5P13010 732 aaKnown RBP5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 CDC25BP30305 580 aa5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 TAF1CQ15572 869 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 PRPF40BQ6NWY9 871 aaKnown RBP5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 FBXO11Q86XK2 927 aa5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 LENG1Q96BZ8 264 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 BHLHE41Q9C0J9 482 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 MUC3BQ9H195 1237 aa5.57□□□□□ -1.52
TRAPPC11-207ENST00000511409 BTBD11A6QL63 1104 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 FBXO24O75426 580 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 ZNF76P36508 570 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 CABP4P57796 275 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 LRP8Q14114 963 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 C9orf131Q5VYM1 1079 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 WFDC8Q8IUA0 241 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 MAP4K3Q8IVH8 894 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 DMRTC2Q8IXT2 367 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 IL22RA1Q8N6P7 574 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 DCAF11Q8TEB1 546 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 BSNDQ8WZ55 320 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 ZFYVE1Q9HBF4 777 aa5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 SH2B1Q9NRF2 756 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 GPN3Q9UHW5 284 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-207ENST00000511409 SELPP16109 830 aa5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 CDC27P30260 824 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms