RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 MYO3BQ8WXR4 1341 aa17.35■□□□□ 0.37
DDX41-212ENST00000511040 SASH1O94885 1247 aa17.34■□□□□ 0.37
DDX41-212ENST00000511040 ADORA1P30542 326 aa17.34■□□□□ 0.37
DDX41-212ENST00000511040 TFCP2Q12800 502 aa17.34■□□□□ 0.37
DDX41-212ENST00000511040 SCARF1Q14162 830 aa17.34■□□□□ 0.37
DDX41-212ENST00000511040 OGFOD1Q8N543 542 aa17.34■□□□□ 0.37
DDX41-212ENST00000511040 ZC3H15Q8WU90 426 aaKnown RBP17.34■□□□□ 0.37
DDX41-212ENST00000511040 PGAP2Q9UHJ9 254 aa17.34■□□□□ 0.37
DDX41-212ENST00000511040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.34■□□□□ 0.37
DDX41-212ENST00000511040 FAM205AQ6ZU69 1335 aa17.33■□□□□ 0.36
DDX41-212ENST00000511040 FRAT2O75474 233 aaPredicted RBP17.33■□□□□ 0.36
DDX41-212ENST00000511040 G3BP1Q13283 466 aaKnown RBP eCLIP17.33■□□□□ 0.36
DDX41-212ENST00000511040 POLA2Q14181 598 aa17.33■□□□□ 0.36
DDX41-212ENST00000511040 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
DDX41-212ENST00000511040 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
DDX41-212ENST00000511040 GGA3Q9NZ52 723 aa17.33■□□□□ 0.36
DDX41-212ENST00000511040 ADM5C9JUS6 153 aa17.32■□□□□ 0.36
DDX41-212ENST00000511040 MFSD14BQ5SR56 506 aa17.32■□□□□ 0.36
DDX41-212ENST00000511040 CEP85Q6P2H3 762 aa17.32■□□□□ 0.36
DDX41-212ENST00000511040 SSH3Q8TE77 659 aa17.32■□□□□ 0.36
DDX41-212ENST00000511040 DCPSQ96C86 337 aaKnown RBP17.32■□□□□ 0.36
DDX41-212ENST00000511040 HDAC9Q9UKV0 1011 aa17.32■□□□□ 0.36
DDX41-212ENST00000511040 DDX19BQ9UMR2 479 aa17.32■□□□□ 0.36
DDX41-212ENST00000511040 SCAF8Q9UPN6 1271 aaKnown RBP17.32■□□□□ 0.36
DDX41-212ENST00000511040 TMEM88BA6NKF7 163 aa17.31■□□□□ 0.36
DDX41-212ENST00000511040 TIMM10P62072 90 aa17.31■□□□□ 0.36
DDX41-212ENST00000511040 OS9Q13438 667 aaPredicted RBP17.31■□□□□ 0.36
DDX41-212ENST00000511040 NBPF9Q3BBW0 867 aa17.31■□□□□ 0.36
DDX41-212ENST00000511040 ANGEL2Q5VTE6 544 aaKnown RBP17.31■□□□□ 0.36
DDX41-212ENST00000511040 CDC37L1Q7L3B6 337 aa17.31■□□□□ 0.36
DDX41-212ENST00000511040 KRT26Q7Z3Y9 468 aa17.31■□□□□ 0.36
DDX41-212ENST00000511040 DNAJC5GQ8N7S2 189 aa17.31■□□□□ 0.36
DDX41-212ENST00000511040 ZNF408Q9H9D4 720 aa17.31■□□□□ 0.36
DDX41-212ENST00000511040 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
DDX41-212ENST00000511040 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
DDX41-212ENST00000511040 POLR2AP24928 1970 aaKnown RBP17.31■□□□□ 0.36
DDX41-212ENST00000511040 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
DDX41-212ENST00000511040 PHKA1P46020 1223 aa17.3■□□□□ 0.36
DDX41-212ENST00000511040 FKBP1AP62942 108 aaKnown RBP17.3■□□□□ 0.36
DDX41-212ENST00000511040 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
DDX41-212ENST00000511040 GRIK5Q16478 980 aa17.3■□□□□ 0.36
DDX41-212ENST00000511040 ZBTB40Q9NUA8 1239 aa17.3■□□□□ 0.36
DDX41-212ENST00000511040 CEP350Q5VT06 3117 aa17.3■□□□□ 0.36
DDX41-212ENST00000511040 A0A1B0GUL7 405 aa17.29■□□□□ 0.36
DDX41-212ENST00000511040 WNT10BO00744 389 aa17.29■□□□□ 0.36
DDX41-212ENST00000511040 CELF2O95319 508 aaKnown RBP17.29■□□□□ 0.36
DDX41-212ENST00000511040 CST9Q5W186 159 aa17.29■□□□□ 0.36
DDX41-212ENST00000511040 NEUROD6Q96NK8 337 aa17.29■□□□□ 0.36
DDX41-212ENST00000511040 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
DDX41-212ENST00000511040 DLGAP5Q15398 846 aa17.28■□□□□ 0.36
DDX41-212ENST00000511040 SULF1Q8IWU6 871 aa17.28■□□□□ 0.36
DDX41-212ENST00000511040 XAGE2Q96GT9 111 aa17.28■□□□□ 0.36
DDX41-212ENST00000511040 ABT1Q9ULW3 272 aaKnown RBP17.28■□□□□ 0.36
DDX41-212ENST00000511040 TTF2Q9UNY4 1162 aaKnown RBP17.28■□□□□ 0.36
DDX41-212ENST00000511040 AKAP2Q9Y2D5 859 aa17.28■□□□□ 0.36
DDX41-212ENST00000511040 COL1A1P02452 1464 aaPredicted RBP17.28■□□□□ 0.36
DDX41-212ENST00000511040 TRPM7Q96QT4 1865 aa17.27■□□□□ 0.36
DDX41-212ENST00000511040 RBM5P52756 815 aaKnown RBP eCLIP17.27■□□□□ 0.36
DDX41-212ENST00000511040 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
DDX41-212ENST00000511040 CCDC102BQ68D86 513 aa17.27■□□□□ 0.36
DDX41-212ENST00000511040 KLRG1Q96E93 195 aa17.27■□□□□ 0.36
DDX41-212ENST00000511040 GNL3LQ9NVN8 582 aaKnown RBP17.27■□□□□ 0.36
DDX41-212ENST00000511040 ARAP2Q8WZ64 1704 aa17.27■□□□□ 0.35
DDX41-212ENST00000511040 AOX1Q06278 1338 aa17.26■□□□□ 0.35
DDX41-212ENST00000511040 RRP1P56182 461 aaKnown RBP17.26■□□□□ 0.35
DDX41-212ENST00000511040 ZBED3Q96IU2 234 aaPredicted RBP17.26■□□□□ 0.35
DDX41-212ENST00000511040 EXOC6BQ9Y2D4 811 aa17.26■□□□□ 0.35
DDX41-212ENST00000511040 NOP58Q9Y2X3 529 aaKnown RBP17.26■□□□□ 0.35
DDX41-212ENST00000511040 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
DDX41-212ENST00000511040 MMP14P50281 582 aa17.25■□□□□ 0.35
DDX41-212ENST00000511040 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
DDX41-212ENST00000511040 PRAMEF18Q5VWM3 479 aa17.25■□□□□ 0.35
DDX41-212ENST00000511040 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
DDX41-212ENST00000511040 TBC1D22AQ8WUA7 517 aa17.25■□□□□ 0.35
DDX41-212ENST00000511040 PRMT6Q96LA8 375 aaPredicted RBP17.25■□□□□ 0.35
DDX41-212ENST00000511040 CLRN2A0PK11 232 aa17.24■□□□□ 0.35
DDX41-212ENST00000511040 TNNI3KQ59H18 835 aa17.24■□□□□ 0.35
DDX41-212ENST00000511040 CDCA5Q96FF9 252 aa17.24■□□□□ 0.35
DDX41-212ENST00000511040 CHMP4BQ9H444 224 aaKnown RBP17.24■□□□□ 0.35
DDX41-212ENST00000511040 FPGT-TNNI3KV9GXZ4 949 aa17.24■□□□□ 0.35
DDX41-212ENST00000511040 PITPNM2Q9BZ72 1349 aa17.23■□□□□ 0.35
DDX41-212ENST00000511040 SPDYE2BA6NHP3 402 aa17.23■□□□□ 0.35
DDX41-212ENST00000511040 APBB1O00213 710 aa17.23■□□□□ 0.35
DDX41-212ENST00000511040 SPDYE6P0CI01 402 aa17.23■□□□□ 0.35
DDX41-212ENST00000511040 CRKP46108 304 aa17.23■□□□□ 0.35
DDX41-212ENST00000511040 RASGRF1Q13972 1273 aa17.23■□□□□ 0.35
DDX41-212ENST00000511040 RPAP2Q8IXW5 612 aaPredicted RBP17.23■□□□□ 0.35
DDX41-212ENST00000511040 MTMR14Q8NCE2 650 aa17.23■□□□□ 0.35
DDX41-212ENST00000511040 WDR66Q8TBY9 1149 aa17.23■□□□□ 0.35
DDX41-212ENST00000511040 DENND2AQ9ULE3 1009 aa17.23■□□□□ 0.35
DDX41-212ENST00000511040 PAXIP1Q6ZW49 1069 aaPredicted RBP17.22■□□□□ 0.35
DDX41-212ENST00000511040 DBNDD2Q9BQY9 259 aa17.22■□□□□ 0.35
DDX41-212ENST00000511040 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
DDX41-212ENST00000511040 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
DDX41-212ENST00000511040 SERPINA10Q9UK55 444 aa17.22■□□□□ 0.35
DDX41-212ENST00000511040 CNTNAP1P78357 1384 aa17.22■□□□□ 0.35
DDX41-212ENST00000511040 SEMA3EO15041 775 aa17.21■□□□□ 0.35
DDX41-212ENST00000511040 HMMRO75330 724 aa17.21■□□□□ 0.35
DDX41-212ENST00000511040 GRM1Q13255 1194 aa17.21■□□□□ 0.35
DDX41-212ENST00000511040 DEFB115Q30KQ5 88 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms