RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 FMR1Q06787 632 aaKnown RBP eCLIP14.59□□□□□ -0.076e-8■■■■■ 30.4
HMGXB3-203ENST00000510472 TFCP2Q12800 502 aa14.59□□□□□ -0.07
HMGXB3-203ENST00000510472 ATP2B3Q16720 1220 aa14.59□□□□□ -0.07
HMGXB3-203ENST00000510472 CEP85Q6P2H3 762 aa14.59□□□□□ -0.07
HMGXB3-203ENST00000510472 YTHDC1Q96MU7 727 aaKnown RBP14.59□□□□□ -0.07
HMGXB3-203ENST00000510472 DDX19BQ9UMR2 479 aa14.59□□□□□ -0.07
HMGXB3-203ENST00000510472 ASTN2O75129 1339 aaPredicted RBP14.59□□□□□ -0.07
HMGXB3-203ENST00000510472 A0A1B0GUL6 1792 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 TRAF5O00463 557 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 TIMM10P62072 90 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 SCARF1Q14162 830 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 CST9Q5W186 159 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 CDC37L1Q7L3B6 337 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 KIAA0825Q8IV33 1275 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 OGFOD1Q8N543 542 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 FBXW7Q969H0 707 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 GLIS2Q9BZE0 524 aaPredicted RBP14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 CREBZFQ9NS37 354 aa14.58□□□□□ -0.08
HMGXB3-203ENST00000510472 WNT10BO00744 389 aa14.57□□□□□ -0.08
HMGXB3-203ENST00000510472 VPS37DQ86XT2 251 aa14.57□□□□□ -0.08
HMGXB3-203ENST00000510472 SIRT2Q8IXJ6 389 aa14.57□□□□□ -0.08
HMGXB3-203ENST00000510472 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.57□□□□□ -0.08
HMGXB3-203ENST00000510472 MTMR14Q8NCE2 650 aa14.57□□□□□ -0.08
HMGXB3-203ENST00000510472 JAG2Q9Y219 1238 aa14.57□□□□□ -0.08
HMGXB3-203ENST00000510472 TMEM88BA6NKF7 163 aa14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 ADORA1P30542 326 aa14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 G3BP1Q13283 466 aaKnown RBP eCLIP14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 GRIK5Q16478 980 aa14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 NBPF9Q3BBW0 867 aa14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 MFSD14BQ5SR56 506 aa14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 USP48Q86UV5 1035 aa14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 RPAP2Q8IXW5 612 aaPredicted RBP14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 IQSEC3Q9UPP2 1182 aaPredicted RBP14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 AKAP2Q9Y2D5 859 aa14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 ZNF646O15015 1829 aaPredicted RBP14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 PSME4Q14997 1843 aa14.56□□□□□ -0.08
HMGXB3-203ENST00000510472 A0A1B0GUL7 405 aa14.55□□□□□ -0.08
HMGXB3-203ENST00000510472 SURF6O75683 361 aaKnown RBP14.55□□□□□ -0.08
HMGXB3-203ENST00000510472 PHKA1P46020 1223 aa14.55□□□□□ -0.08
HMGXB3-203ENST00000510472 DLK2Q6UY11 383 aa14.55□□□□□ -0.08
HMGXB3-203ENST00000510472 KRT26Q7Z3Y9 468 aa14.55□□□□□ -0.08
HMGXB3-203ENST00000510472 DCPSQ96C86 337 aaKnown RBP14.55□□□□□ -0.08
HMGXB3-203ENST00000510472 GPR108Q9NPR9 543 aa14.55□□□□□ -0.08
HMGXB3-203ENST00000510472 GGA3Q9NZ52 723 aa14.55□□□□□ -0.08
HMGXB3-203ENST00000510472 HDAC9Q9UKV0 1011 aa14.55□□□□□ -0.08
HMGXB3-203ENST00000510472 ANGEL2Q5VTE6 544 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-203ENST00000510472 CCDC102BQ68D86 513 aa14.54□□□□□ -0.08
HMGXB3-203ENST00000510472 TBC1D22AQ8WUA7 517 aa14.54□□□□□ -0.08
HMGXB3-203ENST00000510472 KLRG1Q96E93 195 aa14.54□□□□□ -0.08
HMGXB3-203ENST00000510472 XAGE2Q96GT9 111 aa14.54□□□□□ -0.08
HMGXB3-203ENST00000510472 MRIQ9BWK5 157 aa14.54□□□□□ -0.08
HMGXB3-203ENST00000510472 CHMP4BQ9H444 224 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-203ENST00000510472 SUGT1Q9Y2Z0 365 aa14.54□□□□□ -0.08
HMGXB3-203ENST00000510472 PITPNM2Q9BZ72 1349 aa14.54□□□□□ -0.08
HMGXB3-203ENST00000510472 SEMA3EO15041 775 aa14.53□□□□□ -0.08
HMGXB3-203ENST00000510472 CHAF1AQ13111 956 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-203ENST00000510472 PRMT6Q96LA8 375 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-203ENST00000510472 SERPINA10Q9UK55 444 aa14.53□□□□□ -0.08
HMGXB3-203ENST00000510472 PCDHAC2Q9Y5I4 1007 aa14.53□□□□□ -0.08
HMGXB3-203ENST00000510472 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 ADM5C9JUS6 153 aa14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 F8W031 263 aaPredicted RBP14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 RRP1P56182 461 aaKnown RBP14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 HDLBPQ00341 1268 aaKnown RBP14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 DLGAP5Q15398 846 aa14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 CFAP100Q494V2 611 aa14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 SULF1Q8IWU6 871 aa14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 JMYQ8N9B5 988 aa14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 WDR66Q8TBY9 1149 aa14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 GNL3LQ9NVN8 582 aaKnown RBP14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 TTF2Q9UNY4 1162 aaKnown RBP14.52□□□□□ -0.09
HMGXB3-203ENST00000510472 COL1A1P02452 1464 aaPredicted RBP14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 AOX1Q06278 1338 aa14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 PDS5AQ29RF7 1337 aaKnown RBP14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 SALL1Q9NSC2 1324 aa14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 RASSF10A6NK89 507 aa14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 FRAT2O75474 233 aaPredicted RBP14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 CELF2O95319 508 aaKnown RBP14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 RASGRF1Q13972 1273 aa14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 DENND2AQ9ULE3 1009 aa14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
HMGXB3-203ENST00000510472 CAPN15O75808 1086 aa14.5□□□□□ -0.09
HMGXB3-203ENST00000510472 SAPCD2Q86UD0 394 aa14.5□□□□□ -0.09
HMGXB3-203ENST00000510472 NEUROD6Q96NK8 337 aa14.5□□□□□ -0.09
HMGXB3-203ENST00000510472 TLL2Q9Y6L7 1015 aa14.5□□□□□ -0.09
HMGXB3-203ENST00000510472 CNTNAP1P78357 1384 aa14.49□□□□□ -0.09
HMGXB3-203ENST00000510472 ARID4AP29374 1257 aaPredicted RBP14.49□□□□□ -0.09
HMGXB3-203ENST00000510472 CRKP46108 304 aa14.49□□□□□ -0.09
HMGXB3-203ENST00000510472 EAF2Q96CJ1 260 aaPredicted RBP14.49□□□□□ -0.09
HMGXB3-203ENST00000510472 CDCA5Q96FF9 252 aa14.49□□□□□ -0.09
HMGXB3-203ENST00000510472 ZDHHC15Q96MV8 337 aa14.49□□□□□ -0.09
HMGXB3-203ENST00000510472 SCAF8Q9UPN6 1271 aaKnown RBP14.49□□□□□ -0.09
HMGXB3-203ENST00000510472 EXOC6BQ9Y2D4 811 aa14.49□□□□□ -0.09
HMGXB3-203ENST00000510472 HMMRO75330 724 aa14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 OS9Q13438 667 aaPredicted RBP14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 DEFB115Q30KQ5 88 aa14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 HSP90AB4PQ58FF6 505 aa14.48□□□□□ -0.09
HMGXB3-203ENST00000510472 APOBEC3HQ6NTF7 200 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms