RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 PDGFDQ9GZP0 370 aaPredicted RBP11.98□□□□□ -0.49
RETREG1-206ENST00000510362 PNNQ9H307 717 aaKnown RBP11.98□□□□□ -0.49
RETREG1-206ENST00000510362 SLC52A2Q9HAB3 445 aa11.98□□□□□ -0.49
RETREG1-206ENST00000510362 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
RETREG1-206ENST00000510362 TJP1Q07157 1748 aa11.97□□□□□ -0.49
RETREG1-206ENST00000510362 ZBTB7AO95365 584 aa11.97□□□□□ -0.49
RETREG1-206ENST00000510362 ZIC2O95409 532 aaPredicted RBP11.97□□□□□ -0.49
RETREG1-206ENST00000510362 TIMP2P16035 220 aa11.97□□□□□ -0.49
RETREG1-206ENST00000510362 GTF2IP78347 998 aa11.97□□□□□ -0.49
RETREG1-206ENST00000510362 CLDN10P78369 228 aa11.97□□□□□ -0.49
RETREG1-206ENST00000510362 CRTC2Q53ET0 693 aaPredicted RBP11.97□□□□□ -0.49
RETREG1-206ENST00000510362 OGFOD1Q8N543 542 aa11.97□□□□□ -0.49
RETREG1-206ENST00000510362 OSBPL3Q9H4L5 887 aa11.97□□□□□ -0.49
RETREG1-206ENST00000510362 ZFAND3Q9H8U3 227 aa11.97□□□□□ -0.49
RETREG1-206ENST00000510362 PPP1R1BQ9UD71 204 aaPredicted RBP11.97□□□□□ -0.49
RETREG1-206ENST00000510362 FAM196BA6NMK8 535 aa11.96□□□□□ -0.49
RETREG1-206ENST00000510362 ATG7O95352 703 aa11.96□□□□□ -0.49
RETREG1-206ENST00000510362 RASA1P20936 1047 aa11.96□□□□□ -0.49
RETREG1-206ENST00000510362 ADD1P35611 737 aaKnown RBP11.96□□□□□ -0.49
RETREG1-206ENST00000510362 LGR6Q9HBX8 967 aa11.96□□□□□ -0.49
RETREG1-206ENST00000510362 PCDHGA11Q9Y5H2 935 aa11.96□□□□□ -0.49
RETREG1-206ENST00000510362 DLG5Q8TDM6 1919 aa11.96□□□□□ -0.5
RETREG1-206ENST00000510362 FAM187AA6NFU0 413 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L15C9J2P7 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L10C9JJH3 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L13C9JLJ4 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L12C9JPN9 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L11C9JVI0 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L21D6R901 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L18D6R9N7 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L22D6RA61 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L17D6RBQ6 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L19D6RCP7 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L20D6RJB6 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 ATP1A2P50993 1020 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 USP17L24Q0WX57 530 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 TEFQ10587 303 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 RTF1Q92541 710 aaKnown RBP11.95□□□□□ -0.5
RETREG1-206ENST00000510362 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 KIAA1024Q9UPX6 916 aa11.95□□□□□ -0.5
RETREG1-206ENST00000510362 CEMIPQ8WUJ3 1361 aa11.94□□□□□ -0.5
RETREG1-206ENST00000510362 GFRA3O60609 400 aa11.94□□□□□ -0.5
RETREG1-206ENST00000510362 SSFA2P28290 1259 aa11.94□□□□□ -0.5
RETREG1-206ENST00000510362 CBLBQ13191 982 aa11.94□□□□□ -0.5
RETREG1-206ENST00000510362 PTK7Q13308 1070 aa11.94□□□□□ -0.5
RETREG1-206ENST00000510362 ITPK1Q13572 414 aa11.94□□□□□ -0.5
RETREG1-206ENST00000510362 LINC00116Q8NCU8 138 aa11.94□□□□□ -0.5
RETREG1-206ENST00000510362 ARXQ96QS3 562 aa11.94□□□□□ -0.5
RETREG1-206ENST00000510362 PRKRIP1Q9H875 184 aaPredicted RBP11.94□□□□□ -0.5
RETREG1-206ENST00000510362 DNAAF2Q9NVR5 837 aaKnown RBP11.94□□□□□ -0.5
RETREG1-206ENST00000510362 KCPQ6ZWJ8 1503 aa11.94□□□□□ -0.5
RETREG1-206ENST00000510362 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
RETREG1-206ENST00000510362 MAPK8IP3Q9UPT6 1336 aa11.93□□□□□ -0.5
RETREG1-206ENST00000510362 ZBTB7BO15156 539 aaPredicted RBP11.93□□□□□ -0.5
RETREG1-206ENST00000510362 HTATSF1O43719 755 aaKnown RBP11.93□□□□□ -0.5
RETREG1-206ENST00000510362 PTCD1O75127 700 aaKnown RBP11.93□□□□□ -0.5
RETREG1-206ENST00000510362 POLD1P28340 1107 aa11.93□□□□□ -0.5
RETREG1-206ENST00000510362 COL23A1Q86Y22 540 aaPredicted RBP11.93□□□□□ -0.5
RETREG1-206ENST00000510362 IL17REQ8NFR9 667 aa11.93□□□□□ -0.5
RETREG1-206ENST00000510362 ZNF594Q96JF6 807 aaPredicted RBP11.93□□□□□ -0.5
RETREG1-206ENST00000510362 C4AP0C0L4 1744 aa11.92□□□□□ -0.5
RETREG1-206ENST00000510362 NRG2O14511 850 aaPredicted RBP11.92□□□□□ -0.5
RETREG1-206ENST00000510362 Q6ZVU0 165 aa11.92□□□□□ -0.5
RETREG1-206ENST00000510362 TTC5Q8N0Z6 440 aa11.92□□□□□ -0.5
RETREG1-206ENST00000510362 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
RETREG1-206ENST00000510362 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
RETREG1-206ENST00000510362 ZMIZ1Q9ULJ6 1067 aa11.92□□□□□ -0.5
RETREG1-206ENST00000510362 ELOAQ14241 798 aaKnown RBP11.91□□□□□ -0.5
RETREG1-206ENST00000510362 CYP2U1Q7Z449 544 aa11.91□□□□□ -0.5
RETREG1-206ENST00000510362 RETREG2Q8NC44 543 aa11.91□□□□□ -0.5
RETREG1-206ENST00000510362 PLEKHF1Q96S99 279 aa11.91□□□□□ -0.5
RETREG1-206ENST00000510362 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
RETREG1-206ENST00000510362 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.5
RETREG1-206ENST00000510362 ADH1AP07327 375 aa11.9□□□□□ -0.5
RETREG1-206ENST00000510362 WDR43Q15061 677 aaKnown RBP eCLIP11.9□□□□□ -0.5
RETREG1-206ENST00000510362 HOMEZQ8IX15 550 aa11.9□□□□□ -0.5
RETREG1-206ENST00000510362 SIX5Q8N196 739 aa11.9□□□□□ -0.5
RETREG1-206ENST00000510362 NOVA2Q9UNW9 492 aaKnown RBP11.9□□□□□ -0.5
RETREG1-206ENST00000510362 BTBD11A6QL63 1104 aa11.89□□□□□ -0.51
RETREG1-206ENST00000510362 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
RETREG1-206ENST00000510362 DKK1O94907 266 aa11.89□□□□□ -0.51
RETREG1-206ENST00000510362 STAU1O95793 577 aaKnown RBP11.89□□□□□ -0.51
RETREG1-206ENST00000510362 AVPP01185 164 aa11.89□□□□□ -0.51
RETREG1-206ENST00000510362 SLC39A6Q13433 755 aa11.89□□□□□ -0.51
RETREG1-206ENST00000510362 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
RETREG1-206ENST00000510362 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
RETREG1-206ENST00000510362 ZNF790Q6PG37 636 aa11.89□□□□□ -0.51
RETREG1-206ENST00000510362 ANKMY2Q8IV38 441 aa11.89□□□□□ -0.51
RETREG1-206ENST00000510362 KDM3BQ7LBC6 1761 aa11.88□□□□□ -0.51
RETREG1-206ENST00000510362 CAPN5O15484 640 aaPredicted RBP11.88□□□□□ -0.51
RETREG1-206ENST00000510362 CRKLP46109 303 aaKnown RBP11.88□□□□□ -0.51
RETREG1-206ENST00000510362 DPYDQ12882 1025 aa11.88□□□□□ -0.51
RETREG1-206ENST00000510362 PKDCCQ504Y2 493 aa11.88□□□□□ -0.51
RETREG1-206ENST00000510362 TRAPPC3LQ5T215 181 aa11.88□□□□□ -0.51
RETREG1-206ENST00000510362 MCM10Q7L590 875 aa11.88□□□□□ -0.51
RETREG1-206ENST00000510362 MEIOBQ8N635 442 aa11.88□□□□□ -0.51
RETREG1-206ENST00000510362 KDF1Q8NAX2 398 aaPredicted RBP11.88□□□□□ -0.51
RETREG1-206ENST00000510362 TPCN2Q8NHX9 752 aa11.88□□□□□ -0.51
RETREG1-206ENST00000510362 DGAT1O75907 488 aa11.87□□□□□ -0.51
RETREG1-206ENST00000510362 AMIGO3Q86WK7 504 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms