RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 IL16Q14005 1332 aa13.27□□□□□ -0.29
DDX41-211ENST00000510171 CLRN2A0PK11 232 aa13.26□□□□□ -0.29
DDX41-211ENST00000510171 UNCXA6NJT0 531 aa13.26□□□□□ -0.29
DDX41-211ENST00000510171 F8W031 263 aaPredicted RBP13.26□□□□□ -0.29
DDX41-211ENST00000510171 ZBTB48P10074 688 aaPredicted RBP13.26□□□□□ -0.29
DDX41-211ENST00000510171 IL1R1P14778 569 aa13.26□□□□□ -0.29
DDX41-211ENST00000510171 FKBP1AP62942 108 aaKnown RBP13.26□□□□□ -0.29
DDX41-211ENST00000510171 CFAP100Q494V2 611 aa13.26□□□□□ -0.29
DDX41-211ENST00000510171 ZNF804AQ7Z570 1209 aa13.26□□□□□ -0.29
DDX41-211ENST00000510171 WNK4Q96J92 1243 aa13.26□□□□□ -0.29
DDX41-211ENST00000510171 PRMT6Q96LA8 375 aaPredicted RBP13.26□□□□□ -0.29
DDX41-211ENST00000510171 CHMP3Q9Y3E7 222 aa13.26□□□□□ -0.29
DDX41-211ENST00000510171 TRIM17Q9Y577 477 aa13.26□□□□□ -0.29
DDX41-211ENST00000510171 IRS2Q9Y4H2 1338 aa13.25□□□□□ -0.29
DDX41-211ENST00000510171 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
DDX41-211ENST00000510171 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
DDX41-211ENST00000510171 FOXO4P98177 505 aa13.25□□□□□ -0.29
DDX41-211ENST00000510171 OTUD7BQ6GQQ9 843 aa13.25□□□□□ -0.29
DDX41-211ENST00000510171 CLMNQ96JQ2 1002 aa13.25□□□□□ -0.29
DDX41-211ENST00000510171 PCDHAC2Q9Y5I4 1007 aa13.25□□□□□ -0.29
DDX41-211ENST00000510171 COL1A1P02452 1464 aaPredicted RBP13.24□□□□□ -0.29
DDX41-211ENST00000510171 AKAP11Q9UKA4 1901 aa13.24□□□□□ -0.29
DDX41-211ENST00000510171 PLIN1O60240 522 aa13.24□□□□□ -0.29
DDX41-211ENST00000510171 VAMP4O75379 141 aa13.24□□□□□ -0.29
DDX41-211ENST00000510171 IREB2P48200 963 aaKnown RBP13.24□□□□□ -0.29
DDX41-211ENST00000510171 RBM5P52756 815 aaKnown RBP eCLIP13.24□□□□□ -0.29
DDX41-211ENST00000510171 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
DDX41-211ENST00000510171 CCDC184Q52MB2 194 aa13.24□□□□□ -0.29
DDX41-211ENST00000510171 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
DDX41-211ENST00000510171 TAF7LQ5H9L4 462 aa13.24□□□□□ -0.29
DDX41-211ENST00000510171 NBPF12Q5TAG4 269 aaPredicted RBP13.24□□□□□ -0.29
DDX41-211ENST00000510171 INTS3Q68E01 1043 aaKnown RBP13.24□□□□□ -0.29
DDX41-211ENST00000510171 VEZTQ9HBM0 779 aa13.24□□□□□ -0.29
DDX41-211ENST00000510171 IGF2BP3O00425 579 aaKnown RBP eCLIP13.23□□□□□ -0.29
DDX41-211ENST00000510171 USP2O75604 605 aaPredicted RBP13.23□□□□□ -0.29
DDX41-211ENST00000510171 RASA3Q14644 834 aa13.23□□□□□ -0.29
DDX41-211ENST00000510171 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
DDX41-211ENST00000510171 LDHAL6AQ6ZMR3 332 aa13.23□□□□□ -0.29
DDX41-211ENST00000510171 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
DDX41-211ENST00000510171 ERO1AQ96HE7 468 aa13.23□□□□□ -0.29
DDX41-211ENST00000510171 JAG2Q9Y219 1238 aa13.23□□□□□ -0.29
DDX41-211ENST00000510171 FANCIQ9NVI1 1328 aa13.22□□□□□ -0.29
DDX41-211ENST00000510171 F6X3S4 739 aa13.22□□□□□ -0.29
DDX41-211ENST00000510171 BEND3Q5T5X7 828 aa13.22□□□□□ -0.29
DDX41-211ENST00000510171 ANKRD13AQ8IZ07 590 aa13.22□□□□□ -0.29
DDX41-211ENST00000510171 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
DDX41-211ENST00000510171 GJA5P36382 358 aa13.21□□□□□ -0.29
DDX41-211ENST00000510171 EXOSC9Q06265 439 aaKnown RBP13.21□□□□□ -0.29
DDX41-211ENST00000510171 CRHR2Q13324 411 aa13.21□□□□□ -0.29
DDX41-211ENST00000510171 TNFAIP1Q13829 316 aa13.21□□□□□ -0.29
DDX41-211ENST00000510171 EPHA10Q5JZY3 1008 aa13.21□□□□□ -0.29
DDX41-211ENST00000510171 WDR63Q8IWG1 891 aa13.21□□□□□ -0.29
DDX41-211ENST00000510171 GCC1Q96CN9 775 aa13.21□□□□□ -0.29
DDX41-211ENST00000510171 ZNF594Q96JF6 807 aaPredicted RBP13.21□□□□□ -0.29
DDX41-211ENST00000510171 PSME4Q14997 1843 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 AOX1Q06278 1338 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 TESPA1A2RU30 521 aaPredicted RBP13.2□□□□□ -0.3
DDX41-211ENST00000510171 GRM8O00222 908 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 HIBADHP31937 336 aaKnown RBP13.2□□□□□ -0.3
DDX41-211ENST00000510171 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 TDRD7Q8NHU6 1098 aaKnown RBP13.2□□□□□ -0.3
DDX41-211ENST00000510171 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 PTPN18Q99952 460 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 C9orf78Q9NZ63 289 aaPredicted RBP13.2□□□□□ -0.3
DDX41-211ENST00000510171 ZNF70Q9UC06 446 aaPredicted RBP13.2□□□□□ -0.3
DDX41-211ENST00000510171 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
DDX41-211ENST00000510171 SSC5DA1L4H1 1573 aa13.2□□□□□ -0.3
DDX41-211ENST00000510171 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
DDX41-211ENST00000510171 SP3Q02447 781 aa13.19□□□□□ -0.3
DDX41-211ENST00000510171 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
DDX41-211ENST00000510171 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
DDX41-211ENST00000510171 OPTNQ96CV9 577 aa13.19□□□□□ -0.3
DDX41-211ENST00000510171 TDRD3Q9H7E2 651 aaKnown RBP13.19□□□□□ -0.3
DDX41-211ENST00000510171 ELP3Q9H9T3 547 aa13.19□□□□□ -0.3
DDX41-211ENST00000510171 TTF2Q9UNY4 1162 aaKnown RBP13.19□□□□□ -0.3
DDX41-211ENST00000510171 GYG1P46976 350 aa13.18□□□□□ -0.3
DDX41-211ENST00000510171 DZIP1LQ8IYY4 767 aaKnown RBP13.18□□□□□ -0.3
DDX41-211ENST00000510171 FAM84BQ96KN1 310 aaPredicted RBP13.18□□□□□ -0.3
DDX41-211ENST00000510171 TNRC18O15417 2968 aaPredicted RBP13.18□□□□□ -0.3
DDX41-211ENST00000510171 PDE4DIPQ5VU43 2346 aa13.17□□□□□ -0.3
DDX41-211ENST00000510171 TCP10L2B9ZVM9 353 aa13.17□□□□□ -0.3
DDX41-211ENST00000510171 ALDH1L1O75891 902 aa13.17□□□□□ -0.3
DDX41-211ENST00000510171 CRKP46108 304 aa13.17□□□□□ -0.3
DDX41-211ENST00000510171 TNNI2P48788 182 aa13.17□□□□□ -0.3
DDX41-211ENST00000510171 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
DDX41-211ENST00000510171 ARMC5Q96C12 935 aa13.17□□□□□ -0.3
DDX41-211ENST00000510171 MS4A4AQ96JQ5 239 aa13.17□□□□□ -0.3
DDX41-211ENST00000510171 TEPSINQ96N21 525 aa13.17□□□□□ -0.3
DDX41-211ENST00000510171 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
DDX41-211ENST00000510171 EN2P19622 333 aaPredicted RBP13.16□□□□□ -0.3
DDX41-211ENST00000510171 GTF2A2P52657 109 aa13.16□□□□□ -0.3
DDX41-211ENST00000510171 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
DDX41-211ENST00000510171 SLC4A10Q6U841 1118 aa13.16□□□□□ -0.3
DDX41-211ENST00000510171 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.16□□□□□ -0.3
DDX41-211ENST00000510171 VPS37DQ86XT2 251 aa13.16□□□□□ -0.3
DDX41-211ENST00000510171 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms