RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 USP2O75604 605 aaPredicted RBP14.23□□□□□ -0.13
SNF8-207ENST00000509995 KIAA0825Q8IV33 1275 aa14.23□□□□□ -0.13
SNF8-207ENST00000509995 IRS4O14654 1257 aaPredicted RBP14.22□□□□□ -0.13
SNF8-207ENST00000509995 PER1O15534 1290 aaPredicted RBP14.22□□□□□ -0.13
SNF8-207ENST00000509995 WDHD1O75717 1129 aaPredicted RBP14.22□□□□□ -0.13
SNF8-207ENST00000509995 U2AF1L5P0DN76 240 aaPredicted RBP14.22□□□□□ -0.13
SNF8-207ENST00000509995 ATP2B4P23634 1241 aa14.22□□□□□ -0.13
SNF8-207ENST00000509995 GTF2A2P52657 109 aa14.22□□□□□ -0.13
SNF8-207ENST00000509995 U2AF1Q01081 240 aaKnown RBP eCLIP14.22□□□□□ -0.13
SNF8-207ENST00000509995 RTL5Q5HYW3 569 aaPredicted RBP14.22□□□□□ -0.13
SNF8-207ENST00000509995 NBPF12Q5TAG4 269 aaPredicted RBP14.22□□□□□ -0.13
SNF8-207ENST00000509995 RAET1EQ8TD07 263 aa14.22□□□□□ -0.13
SNF8-207ENST00000509995 GUCD1Q96NT3 240 aa14.22□□□□□ -0.13
SNF8-207ENST00000509995 SPEF2Q9C093 1822 aa14.21□□□□□ -0.13
SNF8-207ENST00000509995 SGPL1O95470 568 aa14.21□□□□□ -0.13
SNF8-207ENST00000509995 CTGFP29279 349 aa14.21□□□□□ -0.13
SNF8-207ENST00000509995 UBXN2AP68543 259 aa14.21□□□□□ -0.13
SNF8-207ENST00000509995 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
SNF8-207ENST00000509995 TRIM47Q96LD4 638 aa14.21□□□□□ -0.13
SNF8-207ENST00000509995 ISCA1Q9BUE6 129 aa14.21□□□□□ -0.13
SNF8-207ENST00000509995 RAPGEFL1Q9UHV5 662 aa14.21□□□□□ -0.13
SNF8-207ENST00000509995 NUDCQ9Y266 331 aa14.21□□□□□ -0.13
SNF8-207ENST00000509995 ECM2O94769 699 aaPredicted RBP14.2□□□□□ -0.14
SNF8-207ENST00000509995 CFAP53Q96M91 514 aa14.2□□□□□ -0.14
SNF8-207ENST00000509995 UNC93B1Q9H1C4 597 aa14.2□□□□□ -0.14
SNF8-207ENST00000509995 ZCCHC17Q9NP64 241 aaKnown RBP14.2□□□□□ -0.14
SNF8-207ENST00000509995 BIN2Q9UBW5 565 aaPredicted RBP14.2□□□□□ -0.14
SNF8-207ENST00000509995 MYPNQ86TC9 1320 aa14.19□□□□□ -0.14
SNF8-207ENST00000509995 MGAMO43451 1857 aa14.19□□□□□ -0.14
SNF8-207ENST00000509995 OSBPP22059 807 aa14.19□□□□□ -0.14
SNF8-207ENST00000509995 PSMC4P43686 418 aa14.19□□□□□ -0.14
SNF8-207ENST00000509995 DLGAP5Q15398 846 aa14.19□□□□□ -0.14
SNF8-207ENST00000509995 ZMYND8Q9ULU4 1186 aaPredicted RBP14.19□□□□□ -0.14
SNF8-207ENST00000509995 IRS2Q9Y4H2 1338 aa14.18□□□□□ -0.14
SNF8-207ENST00000509995 ATP5J2-PTCD1G3V325 749 aa14.18□□□□□ -0.14
SNF8-207ENST00000509995 HOXD10P28358 340 aa14.18□□□□□ -0.14
SNF8-207ENST00000509995 MAGEA10P43363 369 aaPredicted RBP14.18□□□□□ -0.14
SNF8-207ENST00000509995 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.18□□□□□ -0.14
SNF8-207ENST00000509995 C7orf61Q8IZ16 206 aa14.18□□□□□ -0.14
SNF8-207ENST00000509995 MTMR14Q8NCE2 650 aa14.18□□□□□ -0.14
SNF8-207ENST00000509995 HELBQ8NG08 1087 aaPredicted RBP14.18□□□□□ -0.14
SNF8-207ENST00000509995 FAM122AQ96E09 287 aa14.18□□□□□ -0.14
SNF8-207ENST00000509995 COA1Q9GZY4 146 aa14.18□□□□□ -0.14
SNF8-207ENST00000509995 CLRN2A0PK11 232 aa14.17□□□□□ -0.14
SNF8-207ENST00000509995 CAPN2P17655 700 aa14.17□□□□□ -0.14
SNF8-207ENST00000509995 VGLL4Q14135 290 aa14.17□□□□□ -0.14
SNF8-207ENST00000509995 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
SNF8-207ENST00000509995 TTLL5Q6EMB2 1281 aa14.17□□□□□ -0.14
SNF8-207ENST00000509995 FAM109BQ6ICB4 259 aaPredicted RBP14.17□□□□□ -0.14
SNF8-207ENST00000509995 C17orf99Q6UX52 265 aa14.17□□□□□ -0.14
SNF8-207ENST00000509995 SLAIN1Q8ND83 568 aa14.17□□□□□ -0.14
SNF8-207ENST00000509995 VEZTQ9HBM0 779 aa14.17□□□□□ -0.14
SNF8-207ENST00000509995 ARAP2Q8WZ64 1704 aa14.16□□□□□ -0.14
SNF8-207ENST00000509995 BTBD19C9JJ37 291 aa14.16□□□□□ -0.14
SNF8-207ENST00000509995 POTEB2H3BUK9 544 aa14.16□□□□□ -0.14
SNF8-207ENST00000509995 MYO1BO43795 1136 aa14.16□□□□□ -0.14
SNF8-207ENST00000509995 ANKRD18AQ8IVF6 992 aa14.16□□□□□ -0.14
SNF8-207ENST00000509995 PLBD2Q8NHP8 589 aa14.16□□□□□ -0.14
SNF8-207ENST00000509995 SYMPKQ92797 1274 aaKnown RBP14.16□□□□□ -0.14
SNF8-207ENST00000509995 PAWRQ96IZ0 340 aaKnown RBP14.16□□□□□ -0.14
SNF8-207ENST00000509995 TSPYL4Q9UJ04 414 aa14.16□□□□□ -0.14
SNF8-207ENST00000509995 PCDHAC2Q9Y5I4 1007 aa14.16□□□□□ -0.14
SNF8-207ENST00000509995 COL2A1P02458 1487 aaPredicted RBP14.16□□□□□ -0.14
SNF8-207ENST00000509995 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
SNF8-207ENST00000509995 FMNL1O95466 1100 aaPredicted RBP14.15□□□□□ -0.14
SNF8-207ENST00000509995 TFRCP02786 760 aaKnown RBP14.15□□□□□ -0.14
SNF8-207ENST00000509995 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
SNF8-207ENST00000509995 CETPP11597 493 aa14.15□□□□□ -0.14
SNF8-207ENST00000509995 SYN1P17600 705 aa14.15□□□□□ -0.14
SNF8-207ENST00000509995 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
SNF8-207ENST00000509995 PRKCZQ05513 592 aa14.15□□□□□ -0.14
SNF8-207ENST00000509995 CNGB1Q14028 1251 aaPredicted RBP14.15□□□□□ -0.14
SNF8-207ENST00000509995 RASA3Q14644 834 aa14.15□□□□□ -0.14
SNF8-207ENST00000509995 FAM161BQ96MY7 647 aa14.15□□□□□ -0.14
SNF8-207ENST00000509995 UBE2OQ9C0C9 1292 aaKnown RBP14.15□□□□□ -0.14
SNF8-207ENST00000509995 CPA4Q9UI42 421 aa14.15□□□□□ -0.14
SNF8-207ENST00000509995 ADGRA2Q96PE1 1338 aa14.15□□□□□ -0.15
SNF8-207ENST00000509995 HSP90B1P14625 803 aaKnown RBP14.14□□□□□ -0.15
SNF8-207ENST00000509995 NECAB2Q7Z6G3 386 aa14.14□□□□□ -0.15
SNF8-207ENST00000509995 TXNRD3Q86VQ6 643 aa14.14□□□□□ -0.15
SNF8-207ENST00000509995 ZBTB38Q8NAP3 1195 aaPredicted RBP14.14□□□□□ -0.15
SNF8-207ENST00000509995 DIS3LQ8TF46 1054 aaKnown RBP14.14□□□□□ -0.15
SNF8-207ENST00000509995 DEFB118Q96PH6 123 aa14.14□□□□□ -0.15
SNF8-207ENST00000509995 TIMELESSQ9UNS1 1208 aa14.14□□□□□ -0.15
SNF8-207ENST00000509995 AOX1Q06278 1338 aa14.14□□□□□ -0.15
SNF8-207ENST00000509995 FAM205AQ6ZU69 1335 aa14.14□□□□□ -0.15
SNF8-207ENST00000509995 SPDYE5A6NIY4 337 aa14.13□□□□□ -0.15
SNF8-207ENST00000509995 CCT4P50991 539 aaKnown RBP14.13□□□□□ -0.15
SNF8-207ENST00000509995 GTF2IP78347 998 aa14.13□□□□□ -0.15
SNF8-207ENST00000509995 TRIM28Q13263 835 aaKnown RBP14.13□□□□□ -0.15
SNF8-207ENST00000509995 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.13□□□□□ -0.153e-6■■■■■ 38.3
SNF8-207ENST00000509995 MAFAQ8NHW3 353 aaPredicted RBP14.13□□□□□ -0.15
SNF8-207ENST00000509995 CCDC85AQ96PX6 553 aaPredicted RBP14.13□□□□□ -0.15
SNF8-207ENST00000509995 CRISPLD2Q9H0B8 497 aa14.13□□□□□ -0.15
SNF8-207ENST00000509995 PAK6Q9NQU5 681 aaPredicted RBP14.13□□□□□ -0.15
SNF8-207ENST00000509995 CSADQ9Y600 493 aa14.13□□□□□ -0.15
SNF8-207ENST00000509995 MYH3P11055 1940 aa14.13□□□□□ -0.15
SNF8-207ENST00000509995 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
SNF8-207ENST00000509995 TNFRSF10AO00220 468 aa14.12□□□□□ -0.15
SNF8-207ENST00000509995 MAP3K9P80192 1104 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms