RNA–Protein interactions for RNA: ENST00000509602.1

CAST-227, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-227ENST00000509602 TRIM42Q8IWZ5 723 aa8.84□□□□□ -0.99
CAST-227ENST00000509602 FAM20CQ8IXL6 584 aa8.84□□□□□ -0.99
CAST-227ENST00000509602 USP26Q9BXU7 913 aa8.84□□□□□ -0.99
CAST-227ENST00000509602 CHRDQ9H2X0 955 aa8.84□□□□□ -0.99
CAST-227ENST00000509602 AMOTL2Q9Y2J4 779 aa8.84□□□□□ -0.99
CAST-227ENST00000509602 HMX2A2RU54 273 aa8.83□□□□□ -1
CAST-227ENST00000509602 NFKBIEO00221 500 aa8.83□□□□□ -1
CAST-227ENST00000509602 TGFB1P01137 390 aa8.83□□□□□ -1
CAST-227ENST00000509602 FKBP4Q02790 459 aaKnown RBP eCLIP8.83□□□□□ -1
CAST-227ENST00000509602 BEND4Q6ZU67 534 aa8.83□□□□□ -1
CAST-227ENST00000509602 ZKSCAN3Q9BRR0 538 aa8.83□□□□□ -1
CAST-227ENST00000509602 CYP4F12Q9HCS2 524 aa8.83□□□□□ -1
CAST-227ENST00000509602 EREGO14944 169 aa8.82□□□□□ -1
CAST-227ENST00000509602 TRPA1O75762 1119 aa8.82□□□□□ -1
CAST-227ENST00000509602 NXPE3Q969Y0 559 aa8.82□□□□□ -1
CAST-227ENST00000509602 HHIPQ96QV1 700 aa8.82□□□□□ -1
CAST-227ENST00000509602 FAM83CQ9BQN1 747 aa8.82□□□□□ -1
CAST-227ENST00000509602 TM4SF5O14894 197 aa8.81□□□□□ -1
CAST-227ENST00000509602 NPR3P17342 541 aa8.81□□□□□ -1
CAST-227ENST00000509602 RXRBP28702 533 aa8.81□□□□□ -1
CAST-227ENST00000509602 PREPP48147 710 aa8.81□□□□□ -1
CAST-227ENST00000509602 MEGF11A6BM72 1044 aa8.8□□□□□ -1
CAST-227ENST00000509602 ZDHHC13Q8IUH4 622 aa8.8□□□□□ -1
CAST-227ENST00000509602 C12orf50Q8NA57 414 aaPredicted RBP8.8□□□□□ -1
CAST-227ENST00000509602 SOX17Q9H6I2 414 aaPredicted RBP8.8□□□□□ -1
CAST-227ENST00000509602 FOXD3Q9UJU5 478 aaPredicted RBP8.8□□□□□ -1
CAST-227ENST00000509602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.8□□□□□ -1
CAST-227ENST00000509602 NEFLP07196 543 aa8.79□□□□□ -1
CAST-227ENST00000509602 IRAK1P51617 712 aa8.79□□□□□ -1
CAST-227ENST00000509602 HP1BP3Q5SSJ5 553 aaPredicted RBP8.79□□□□□ -1
CAST-227ENST00000509602 YIPF2Q9BWQ6 316 aa8.79□□□□□ -1
CAST-227ENST00000509602 BHLHE41Q9C0J9 482 aaPredicted RBP8.79□□□□□ -1
CAST-227ENST00000509602 KIAA1324LA8MWY0 1029 aaPredicted RBP8.78□□□□□ -1
CAST-227ENST00000509602 USP11P51784 963 aa8.78□□□□□ -1
CAST-227ENST00000509602 MCTP1Q6DN14 999 aa8.78□□□□□ -1
CAST-227ENST00000509602 SOX1O00570 391 aaPredicted RBP8.77□□□□□ -1.01
CAST-227ENST00000509602 PAX4O43316 350 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 MAP4P27816 1152 aaKnown RBP8.77□□□□□ -1.01
CAST-227ENST00000509602 GSTM4Q03013 218 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 ZNF211Q13398 564 aaPredicted RBP8.77□□□□□ -1.01
CAST-227ENST00000509602 VN1R5Q7Z5H4 357 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 GJD3Q8N144 294 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 SHKBP1Q8TBC3 707 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 DDX54Q8TDD1 881 aaKnown RBP8.77□□□□□ -1.01
CAST-227ENST00000509602 ZFYVE1Q9HBF4 777 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 ANO2Q9NQ90 1003 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 ATG3Q9NT62 314 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 BRPF3Q9ULD4 1205 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 USTQ9Y2C2 406 aa8.77□□□□□ -1.01
CAST-227ENST00000509602 FZD6O60353 706 aa8.76□□□□□ -1.01
CAST-227ENST00000509602 SMG8Q8ND04 991 aaKnown RBP8.76□□□□□ -1.01
CAST-227ENST00000509602 ZFYVE28Q9HCC9 887 aa8.76□□□□□ -1.01
CAST-227ENST00000509602 LOC100289279A0A1B0GTE1 492 aa8.75□□□□□ -1.01
CAST-227ENST00000509602 WDR64B1ANS9 1081 aa8.75□□□□□ -1.01
CAST-227ENST00000509602 ESRRAP11474 423 aaPredicted RBP8.75□□□□□ -1.01
CAST-227ENST00000509602 GP2P55259 537 aaKnown RBP8.75□□□□□ -1.01
CAST-227ENST00000509602 EXOSC6Q5RKV6 272 aaKnown RBP8.75□□□□□ -1.01
CAST-227ENST00000509602 PAOXQ6QHF9 649 aa8.75□□□□□ -1.01
CAST-227ENST00000509602 C14orf37Q86TY3 774 aa8.75□□□□□ -1.01
CAST-227ENST00000509602 GLYCTKQ8IVS8 523 aa8.75□□□□□ -1.01
CAST-227ENST00000509602 TMPRSS13Q9BYE2 586 aa8.75□□□□□ -1.01
CAST-227ENST00000509602 SUGCTQ9HAC7 445 aa8.75□□□□□ -1.01
CAST-227ENST00000509602 CCDC87Q9NVE4 849 aa8.75□□□□□ -1.01
CAST-227ENST00000509602 EGFL7Q9UHF1 273 aa8.75□□□□□ -1.01
CAST-227ENST00000509602 NDUFB5O43674 189 aa8.74□□□□□ -1.01
CAST-227ENST00000509602 HGSNATQ68CP4 663 aa8.74□□□□□ -1.01
CAST-227ENST00000509602 MFSD14AQ96MC6 490 aa8.74□□□□□ -1.01
CAST-227ENST00000509602 OSBPL1AQ9BXW6 950 aa8.74□□□□□ -1.01
CAST-227ENST00000509602 LATS2Q9NRM7 1088 aa8.74□□□□□ -1.01
CAST-227ENST00000509602 FAM95CA0A1B0GW59 222 aa8.73□□□□□ -1.01
CAST-227ENST00000509602 H3BRB1 525 aa8.73□□□□□ -1.01
CAST-227ENST00000509602 WNT11O96014 354 aa8.73□□□□□ -1.01
CAST-227ENST00000509602 CYP11A1P05108 521 aa8.73□□□□□ -1.01
CAST-227ENST00000509602 CPSF6Q16630 551 aaKnown RBP eCLIP8.73□□□□□ -1.01
CAST-227ENST00000509602 SGO2Q562F6 1265 aa8.73□□□□□ -1.01
CAST-227ENST00000509602 FBXL6Q8N531 539 aa8.73□□□□□ -1.01
CAST-227ENST00000509602 CLEC4MQ9H2X3 399 aaPredicted RBP8.73□□□□□ -1.01
CAST-227ENST00000509602 TUT1Q9H6E5 874 aaKnown RBP8.73□□□□□ -1.01
CAST-227ENST00000509602 LEMD3Q9Y2U8 911 aa8.73□□□□□ -1.01
CAST-227ENST00000509602 PCDH1Q08174 1060 aa8.72□□□□□ -1.01
CAST-227ENST00000509602 PDE3BQ13370 1112 aa8.72□□□□□ -1.01
CAST-227ENST00000509602 NFKBIBQ15653 356 aa8.72□□□□□ -1.01
CAST-227ENST00000509602 PEAR1Q5VY43 1037 aaPredicted RBP8.72□□□□□ -1.01
CAST-227ENST00000509602 METTL22Q9BUU2 404 aaPredicted RBP8.72□□□□□ -1.01
CAST-227ENST00000509602 LIN7BQ9HAP6 207 aa8.72□□□□□ -1.01
CAST-227ENST00000509602 PIM2Q9P1W9 311 aa8.72□□□□□ -1.01
CAST-227ENST00000509602 ANGEL1Q9UNK9 670 aaKnown RBP8.72□□□□□ -1.01
CAST-227ENST00000509602 COL17A1Q9UMD9 1497 aaPredicted RBP8.71□□□□□ -1.01
CAST-227ENST00000509602 A0A096LPE4 126 aa8.71□□□□□ -1.02
CAST-227ENST00000509602 A0A1W2PPZ6 126 aa8.71□□□□□ -1.02
CAST-227ENST00000509602 ICMTO60725 284 aa8.71□□□□□ -1.02
CAST-227ENST00000509602 MED26O95402 600 aa8.71□□□□□ -1.02
CAST-227ENST00000509602 POLR3DP05423 398 aaPredicted RBP8.71□□□□□ -1.02
CAST-227ENST00000509602 SPINK2P20155 84 aa8.71□□□□□ -1.02
CAST-227ENST00000509602 PHLDB3Q6NSJ2 640 aa8.71□□□□□ -1.02
CAST-227ENST00000509602 DTX1Q86Y01 620 aa8.71□□□□□ -1.02
CAST-227ENST00000509602 PRR19A6NJB7 356 aa8.7□□□□□ -1.02
CAST-227ENST00000509602 METTL12A8MUP2 240 aa8.7□□□□□ -1.02
CAST-227ENST00000509602 TIAF1O95411 115 aa8.7□□□□□ -1.02
CAST-227ENST00000509602 GALNT12Q8IXK2 581 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms