RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 HSP90B1P14625 803 aaKnown RBP10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 DDX46Q7L014 1031 aaKnown RBP10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 MB21D2Q8IYB1 491 aaPredicted RBP10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 CEP57L1Q8IYX8 460 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 LINC00301Q8NCQ3 95 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 CGNQ9P2M7 1197 aaKnown RBP10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 NRBP1Q9UHY1 535 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 STRCP1A6NGW2 1772 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 ZMYM6O95789 1325 aa10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 DHX16O60231 1041 aaKnown RBP10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 LRMPQ12912 555 aa10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 AKAP11Q9UKA4 1901 aa10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 ANKRD36CQ5JPF3 1778 aa10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 TNNT1P13805 278 aa10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 FAM193AP78312 1265 aa10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 APOBRQ0VD83 1088 aa10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 DNAJC2Q99543 621 aaKnown RBP10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 ABCA3Q99758 1704 aa10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 ECM29Q5VYK3 1845 aa10.78□□□□□ -0.68
PDGFRA-208ENST00000509490 IKBKBO14920 756 aa10.77□□□□□ -0.68
PDGFRA-208ENST00000509490 MPNDQ8N594 471 aa10.77□□□□□ -0.68
PDGFRA-208ENST00000509490 OGFRQ9NZT2 677 aa10.77□□□□□ -0.68
PDGFRA-208ENST00000509490 AKAP2Q9Y2D5 859 aa10.77□□□□□ -0.68
PDGFRA-208ENST00000509490 MORC2Q9Y6X9 1032 aaPredicted RBP10.77□□□□□ -0.68
PDGFRA-208ENST00000509490 PCDH11XQ9BZA7 1347 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 PCDH11YQ9BZA8 1340 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 TOGARAM1Q9Y4F4 1720 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 GOLIM4O00461 696 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 CCDC150Q8NCX0 1101 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 FBXO18Q8NFZ0 1043 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 NLRP2Q9NX02 1062 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 PCDHA7Q9UN72 937 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 CSF1RP07333 972 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 CABP4P57796 275 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 FSIP1Q8NA03 581 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 L2HGDHQ9H9P8 463 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 KIAA1468Q9P260 1216 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 HPS5Q9UPZ3 1129 aa10.77□□□□□ -0.69
PDGFRA-208ENST00000509490 DOCK2Q92608 1830 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 SPATA31A3Q5VYP0 1347 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 ZBTB7CA1YPR0 619 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 IFIT1P09914 478 aaKnown RBP10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 CMA1P23946 247 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 ATP2B3Q16720 1220 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 NBPF11Q86T75 865 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 CCAR2Q8N163 923 aaKnown RBP10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 DDX11Q96FC9 970 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 CDHR2Q9BYE9 1310 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 A0A1B0GUL7 405 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 M0R2C6 588 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 CEP135Q66GS9 1140 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 DRC7Q8IY82 874 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 CCDC112Q8NEF3 446 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 APPBP2Q92624 585 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 TUBE1Q9UJT0 475 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 HPSEQ9Y251 543 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 RIC1Q4ADV7 1423 aa10.76□□□□□ -0.69
PDGFRA-208ENST00000509490 KIF20AO95235 890 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 CHGBP05060 677 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 NLRP12P59046 1061 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 AXDND1Q5T1B0 1012 aaPredicted RBP10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 OSBP2Q969R2 916 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 DTNBO60941 627 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 PPP6R2O75170 966 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 MYSM1Q5VVJ2 828 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 TSC1Q92574 1164 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 JARID2Q92833 1246 aaPredicted RBP10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 ERO1AQ96HE7 468 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 DDX41Q9UJV9 622 aaKnown RBP10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
PDGFRA-208ENST00000509490 CCDC69A6NI79 296 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 ATP5J2-PTCD1G3V325 749 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 PTCD1O75127 700 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 GABPB1Q06547 395 aaPredicted RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 NCAPHQ15003 741 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 IMMTQ16891 758 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 PROSER2Q86WR7 435 aaPredicted RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 MYH3P11055 1940 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 PCCAP05165 728 aaPredicted RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 SKILP12757 684 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 ANTXR2P58335 489 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 FGD1P98174 961 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 TPD52L1Q16890 204 aaPredicted RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 CREBRFQ8IUR6 639 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 WDR17Q8IZU2 1322 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 STK36Q9NRP7 1315 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 COL5A2P05997 1499 aaPredicted RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 BECN2A8MW95 431 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 ZC3H6P61129 1189 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 KIF23Q02241 960 aaPredicted RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 SLC39A14Q15043 492 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 ALX1Q15699 326 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 NDUFB9Q9Y6M9 179 aa10.74□□□□□ -0.69
PDGFRA-208ENST00000509490 SPTLC2O15270 562 aa10.73□□□□□ -0.69
PDGFRA-208ENST00000509490 ME1P48163 572 aa10.73□□□□□ -0.69
PDGFRA-208ENST00000509490 PTPN14Q15678 1187 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms