RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 WTIPA6NIX2 430 aaPredicted RBP14.6□□□□□ -0.07
NEDD9-212ENST00000508800 ZBTB7BO15156 539 aaPredicted RBP14.6□□□□□ -0.07
NEDD9-212ENST00000508800 MYCP01106 439 aaPredicted RBP14.6□□□□□ -0.07
NEDD9-212ENST00000508800 GJA8P48165 433 aa14.6□□□□□ -0.07
NEDD9-212ENST00000508800 LACTBP83111 547 aaPredicted RBP14.6□□□□□ -0.07
NEDD9-212ENST00000508800 CCDC191Q8NCU4 936 aa14.6□□□□□ -0.07
NEDD9-212ENST00000508800 HELBQ8NG08 1087 aaPredicted RBP14.6□□□□□ -0.07
NEDD9-212ENST00000508800 OPTNQ96CV9 577 aa14.6□□□□□ -0.07
NEDD9-212ENST00000508800 LEMD3Q9Y2U8 911 aa14.6□□□□□ -0.07
NEDD9-212ENST00000508800 VCANP13611 3396 aa14.6□□□□□ -0.07
NEDD9-212ENST00000508800 CCL15-CCL14A0A0B4J2E2 113 aa14.59□□□□□ -0.07
NEDD9-212ENST00000508800 USP2O75604 605 aaPredicted RBP14.59□□□□□ -0.07
NEDD9-212ENST00000508800 GJB1P08034 283 aa14.59□□□□□ -0.07
NEDD9-212ENST00000508800 GOLGA2Q08379 1002 aa14.59□□□□□ -0.07
NEDD9-212ENST00000508800 TRIM26Q12899 539 aaPredicted RBP14.59□□□□□ -0.07
NEDD9-212ENST00000508800 TNFAIP1Q13829 316 aa14.59□□□□□ -0.07
NEDD9-212ENST00000508800 CCL15Q16663 113 aa14.59□□□□□ -0.07
NEDD9-212ENST00000508800 BRI3BPQ8WY22 251 aa14.59□□□□□ -0.07
NEDD9-212ENST00000508800 MINPP1Q9UNW1 487 aa14.59□□□□□ -0.07
NEDD9-212ENST00000508800 TLR2O60603 784 aa14.58□□□□□ -0.08
NEDD9-212ENST00000508800 RIC3Q7Z5B4 369 aa14.58□□□□□ -0.08
NEDD9-212ENST00000508800 STXBP5LQ9Y2K9 1186 aa14.58□□□□□ -0.08
NEDD9-212ENST00000508800 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
NEDD9-212ENST00000508800 SOX1O00570 391 aaPredicted RBP14.57□□□□□ -0.08
NEDD9-212ENST00000508800 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
NEDD9-212ENST00000508800 HOXD10P28358 340 aa14.57□□□□□ -0.08
NEDD9-212ENST00000508800 RIPK4P57078 832 aa14.57□□□□□ -0.08
NEDD9-212ENST00000508800 NBPF12Q5TAG4 269 aaPredicted RBP14.57□□□□□ -0.08
NEDD9-212ENST00000508800 ELP3Q9H9T3 547 aa14.57□□□□□ -0.08
NEDD9-212ENST00000508800 CWC25Q9NXE8 425 aaPredicted RBP14.57□□□□□ -0.08
NEDD9-212ENST00000508800 CHL1O00533 1208 aa14.56□□□□□ -0.08
NEDD9-212ENST00000508800 CTSWP56202 376 aa14.56□□□□□ -0.08
NEDD9-212ENST00000508800 GTF2IP78347 998 aa14.56□□□□□ -0.08
NEDD9-212ENST00000508800 LRCH3Q96II8 777 aa14.56□□□□□ -0.08
NEDD9-212ENST00000508800 ZSWIM8A7E2V4 1837 aa14.56□□□□□ -0.08
NEDD9-212ENST00000508800 EVI5O60447 810 aa14.55□□□□□ -0.08
NEDD9-212ENST00000508800 FARP2O94887 1054 aaPredicted RBP14.55□□□□□ -0.08
NEDD9-212ENST00000508800 CETPP11597 493 aa14.55□□□□□ -0.08
NEDD9-212ENST00000508800 GRK4P32298 578 aa14.55□□□□□ -0.08
NEDD9-212ENST00000508800 MTFR1Q15390 333 aa14.55□□□□□ -0.08
NEDD9-212ENST00000508800 FAM43AQ8N2R8 423 aa14.55□□□□□ -0.08
NEDD9-212ENST00000508800 CCDC85AQ96PX6 553 aaPredicted RBP14.55□□□□□ -0.08
NEDD9-212ENST00000508800 ANKRD2Q9GZV1 360 aa14.55□□□□□ -0.08
NEDD9-212ENST00000508800 VEZTQ9HBM0 779 aa14.55□□□□□ -0.08
NEDD9-212ENST00000508800 SRRDQ9UH36 339 aa14.55□□□□□ -0.08
NEDD9-212ENST00000508800 CSADQ9Y600 493 aa14.55□□□□□ -0.08
NEDD9-212ENST00000508800 FKBP1AP62942 108 aaKnown RBP14.54□□□□□ -0.08
NEDD9-212ENST00000508800 UBXN2AP68543 259 aa14.54□□□□□ -0.08
NEDD9-212ENST00000508800 RASA3Q14644 834 aa14.54□□□□□ -0.08
NEDD9-212ENST00000508800 TXNRD3Q86VQ6 643 aa14.54□□□□□ -0.08
NEDD9-212ENST00000508800 DEFB123Q8N688 67 aa14.54□□□□□ -0.08
NEDD9-212ENST00000508800 RAET1EQ8TD07 263 aa14.54□□□□□ -0.08
NEDD9-212ENST00000508800 ARHGAP39Q9C0H5 1083 aa14.54□□□□□ -0.08
NEDD9-212ENST00000508800 CLRN2A0PK11 232 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 CCL5P13501 91 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 BMP8BP34820 402 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 KRT24Q2M2I5 525 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 CFAP100Q494V2 611 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.53□□□□□ -0.08
NEDD9-212ENST00000508800 TRIM47Q96LD4 638 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 MYD88Q99836 296 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 COL25A1Q9BXS0 654 aaPredicted RBP14.53□□□□□ -0.08
NEDD9-212ENST00000508800 PCGF6Q9BYE7 350 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 RNF208Q9H0X6 261 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 RIPOR2Q9Y4F9 1068 aa14.53□□□□□ -0.08
NEDD9-212ENST00000508800 ARAP2Q8WZ64 1704 aa14.52□□□□□ -0.08
NEDD9-212ENST00000508800 IGHMBP2P38935 993 aaKnown RBP14.52□□□□□ -0.09
NEDD9-212ENST00000508800 MAP3K9P80192 1104 aa14.52□□□□□ -0.09
NEDD9-212ENST00000508800 VGLL4Q14135 290 aa14.52□□□□□ -0.09
NEDD9-212ENST00000508800 TTLL11Q8NHH1 800 aa14.52□□□□□ -0.09
NEDD9-212ENST00000508800 U2AF1L4Q8WU68 220 aaKnown RBP14.52□□□□□ -0.09
NEDD9-212ENST00000508800 SPDYE5A6NIY4 337 aa14.51□□□□□ -0.09
NEDD9-212ENST00000508800 TMPOP42166 694 aaKnown RBP14.51□□□□□ -0.09
NEDD9-212ENST00000508800 KCNJ4P48050 445 aa14.51□□□□□ -0.09
NEDD9-212ENST00000508800 SNAPC2Q13487 334 aa14.51□□□□□ -0.09
NEDD9-212ENST00000508800 CERS5Q8N5B7 392 aa14.51□□□□□ -0.09
NEDD9-212ENST00000508800 PRMT6Q96LA8 375 aaPredicted RBP14.51□□□□□ -0.09
NEDD9-212ENST00000508800 CD209Q9NNX6 404 aa14.51□□□□□ -0.09
NEDD9-212ENST00000508800 BIN2Q9UBW5 565 aaPredicted RBP14.51□□□□□ -0.09
NEDD9-212ENST00000508800 LAMA2P24043 3122 aaKnown RBP14.5□□□□□ -0.09
NEDD9-212ENST00000508800 DDX58O95786 925 aaKnown RBP14.5□□□□□ -0.09
NEDD9-212ENST00000508800 PSMC4P43686 418 aa14.5□□□□□ -0.09
NEDD9-212ENST00000508800 LRIT3Q3SXY7 679 aa14.5□□□□□ -0.09
NEDD9-212ENST00000508800 ERO1BQ86YB8 467 aa14.5□□□□□ -0.09
NEDD9-212ENST00000508800 SLAIN1Q8ND83 568 aa14.5□□□□□ -0.09
NEDD9-212ENST00000508800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.5□□□□□ -0.09
NEDD9-212ENST00000508800 CHMP4AQ9BY43 222 aa14.5□□□□□ -0.09
NEDD9-212ENST00000508800 GREM2Q9H772 168 aa14.5□□□□□ -0.09
NEDD9-212ENST00000508800 STAP2Q9UGK3 403 aa14.5□□□□□ -0.09
NEDD9-212ENST00000508800 MYPNQ86TC9 1320 aa14.49□□□□□ -0.09
NEDD9-212ENST00000508800 SPTBN5Q9NRC6 3674 aaKnown RBP14.49□□□□□ -0.09
NEDD9-212ENST00000508800 BTBD19C9JJ37 291 aa14.49□□□□□ -0.09
NEDD9-212ENST00000508800 SGPL1O95470 568 aa14.49□□□□□ -0.09
NEDD9-212ENST00000508800 TNNI2P48788 182 aa14.49□□□□□ -0.09
NEDD9-212ENST00000508800 RBM5P52756 815 aaKnown RBP eCLIP14.49□□□□□ -0.09
NEDD9-212ENST00000508800 SPDYE2Q495Y8 402 aa14.49□□□□□ -0.09
NEDD9-212ENST00000508800 C17orf99Q6UX52 265 aa14.49□□□□□ -0.09
NEDD9-212ENST00000508800 C15orf52Q6ZUT6 534 aaKnown RBP14.49□□□□□ -0.09
NEDD9-212ENST00000508800 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
NEDD9-212ENST00000508800 GDF15Q99988 308 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms