RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 SSH2Q76I76 1423 aa5.22□□□□□ -1.57
HMGN1P11-201ENST00000508668 TTC21AQ8NDW8 1320 aa5.22□□□□□ -1.57
HMGN1P11-201ENST00000508668 ADGRB1O14514 1584 aa5.21□□□□□ -1.57
HMGN1P11-201ENST00000508668 POLR3AO14802 1390 aaPredicted RBP5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 KTN1Q86UP2 1357 aaKnown RBP5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 RGPD1P0DJD0 1748 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 WIPF1O43516 503 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 PPFIA3O75145 1194 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 PDIA4P13667 645 aaKnown RBP5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 SSFA2P28290 1259 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 MSX1P28360 303 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 ARSJQ5FYB0 599 aaPredicted RBP5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 BICDL1Q6ZP65 573 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 CAPN12Q6ZSI9 719 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 HOMEZQ8IX15 550 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 ALDH16A1Q8IZ83 802 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 STAG2Q8N3U4 1231 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 RHPN1Q8TCX5 695 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 PHACTR1Q9C0D0 580 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 ZDHHC3Q9NYG2 299 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 OVOS2A0A0G2JMS6 1433 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 OVOS2A0A0J9YW53 1432 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 CRB1P82279 1406 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 OVOS2Q6IE36 1432 aa5.21□□□□□ -1.58
HMGN1P11-201ENST00000508668 CPDO75976 1380 aa5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 CDC14CA4D256 554 aa5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 F11P03951 625 aa5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 ATP4AP20648 1035 aa5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 ITGA6P23229 1130 aa5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 AMPHP49418 695 aa5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 HIRAP54198 1017 aaPredicted RBP5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 NAA30Q147X3 362 aaPredicted RBP5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 LCE2AQ5TA79 106 aaPredicted RBP5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 B4GALNT3Q6L9W6 998 aa5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 PGBD3Q8N328 593 aa5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 SYTL4Q96C24 671 aaPredicted RBP5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 NXF1Q9UBU9 619 aaKnown RBP5.2□□□□□ -1.58
HMGN1P11-201ENST00000508668 AATKQ6ZMQ8 1374 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 CCDC7Q96M83 1385 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 KCNQ2O43526 872 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 YY1P25490 414 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 POLD1P28340 1107 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 PHLDB3Q6NSJ2 640 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 C1orf216Q8TAB5 229 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 COG3Q96JB2 828 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 CUEDC1Q9NWM3 386 aaPredicted RBP5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 GJA3Q9Y6H8 435 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 USP6P35125 1406 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 ARHGEF28Q8N1W1 1705 aaKnown RBP5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 KIAA1210Q9ULL0 1709 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 TTC21BQ7Z4L5 1316 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 WDR17Q8IZU2 1322 aa5.19□□□□□ -1.58
HMGN1P11-201ENST00000508668 BRWD3Q6RI45 1802 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 ALS2Q96Q42 1657 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 ABCA3Q99758 1704 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 SMG6Q86US8 1419 aaKnown RBP5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 A0A1W2PNR3 127 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 PTCD1O75127 700 aaKnown RBP5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 IL2RBP14784 551 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 TMF1P82094 1093 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 DGKZQ13574 1117 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 EFHC2Q5JST6 749 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 C1orf53Q5VUE5 145 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 KLRG1Q96E93 195 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 LTV1Q96GA3 475 aaPredicted RBP5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 CAMKK2Q96RR4 588 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 SIN3AQ96ST3 1273 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 ZIC5Q96T25 663 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 TRAIPQ9BWF2 469 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 CARD10Q9BWT7 1032 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 NUCKS1Q9H1E3 243 aaKnown RBP5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 NEUROD4Q9HD90 331 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 SEPT3Q9UH03 358 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 USP19O94966 1318 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 QRICH2Q9H0J4 1663 aa5.18□□□□□ -1.58
HMGN1P11-201ENST00000508668 TRPM3Q9HCF6 1732 aaPredicted RBP5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 PHRF1Q9P1Y6 1649 aaKnown RBP5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 H7C1W4 665 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 PLSCR1O15162 318 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 DBN1Q16643 649 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 RTN1Q16799 776 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 LRRC69Q6ZNQ3 347 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 TRIM22Q8IYM9 498 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 VWA5B2Q8N398 1253 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 DDX54Q8TDD1 881 aaKnown RBP5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 RAPGEF4Q8WZA2 1011 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 COL26A1Q96A83 441 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 ZNF837Q96EG3 531 aaPredicted RBP5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 HSH2DQ96JZ2 352 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 POLR3GLQ9BT43 218 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 SAP130Q9H0E3 1048 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 CRISPLD1Q9H336 500 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 KLK14Q9P0G3 267 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 COL5A2P05997 1499 aaPredicted RBP5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 NRAPQ86VF7 1730 aa5.17□□□□□ -1.58
HMGN1P11-201ENST00000508668 DISP2A7MBM2 1401 aa5.16□□□□□ -1.58
HMGN1P11-201ENST00000508668 CPSF1Q10570 1443 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms