RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 G3V3G9 751 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 GJA5P36382 358 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 DCAF8Q5TAQ9 597 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 ATF7IPQ6VMQ6 1270 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 USP17L1Q7RTZ2 530 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 WNK4Q96J92 1243 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 PTPN18Q99952 460 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 ISCA1Q9BUE6 129 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 GGA1Q9UJY5 639 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 PTCH2Q9Y6C5 1203 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 ATP5J2-PTCD1G3V325 749 aa17.04■□□□□ 0.32
SGCA-206ENST00000508382 MYCP01106 439 aaPredicted RBP17.04■□□□□ 0.32
SGCA-206ENST00000508382 NF2P35240 595 aa17.04■□□□□ 0.32
SGCA-206ENST00000508382 INHBEP58166 350 aa17.04■□□□□ 0.32
SGCA-206ENST00000508382 CLUAP1Q96AJ1 413 aa17.04■□□□□ 0.32
SGCA-206ENST00000508382 SOX1O00570 391 aaPredicted RBP17.03■□□□□ 0.32
SGCA-206ENST00000508382 VAMP4O75379 141 aa17.03■□□□□ 0.32
SGCA-206ENST00000508382 SP3Q02447 781 aa17.03■□□□□ 0.32
SGCA-206ENST00000508382 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
SGCA-206ENST00000508382 DACT2Q5SW24 774 aa17.03■□□□□ 0.32
SGCA-206ENST00000508382 ANKIB1Q9P2G1 1089 aa17.03■□□□□ 0.32
SGCA-206ENST00000508382 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
SGCA-206ENST00000508382 ZBTB48P10074 688 aaPredicted RBP17.02■□□□□ 0.32
SGCA-206ENST00000508382 SHISA4Q96DD7 197 aa17.02■□□□□ 0.32
SGCA-206ENST00000508382 SLC10A4Q96EP9 437 aa17.02■□□□□ 0.32
SGCA-206ENST00000508382 API5Q9BZZ5 524 aaKnown RBP17.02■□□□□ 0.32
SGCA-206ENST00000508382 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
SGCA-206ENST00000508382 IRS4O14654 1257 aaPredicted RBP17.01■□□□□ 0.31
SGCA-206ENST00000508382 MAP3K11Q16584 847 aa17.01■□□□□ 0.31
SGCA-206ENST00000508382 SLC4A8Q2Y0W8 1093 aa17.01■□□□□ 0.31
SGCA-206ENST00000508382 ZBED3Q96IU2 234 aaPredicted RBP17.01■□□□□ 0.31
SGCA-206ENST00000508382 KRT24Q2M2I5 525 aa17■□□□□ 0.31
SGCA-206ENST00000508382 SLC9C1Q4G0N8 1177 aa17■□□□□ 0.31
SGCA-206ENST00000508382 PODNQ7Z5L7 613 aa17■□□□□ 0.31
SGCA-206ENST00000508382 PANK1Q8TE04 598 aa17■□□□□ 0.31
SGCA-206ENST00000508382 COG6Q9Y2V7 657 aa17■□□□□ 0.31
SGCA-206ENST00000508382 TRIM27P14373 513 aa16.99■□□□□ 0.31
SGCA-206ENST00000508382 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
SGCA-206ENST00000508382 SH3TC2Q8TF17 1288 aa16.99■□□□□ 0.31
SGCA-206ENST00000508382 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
SGCA-206ENST00000508382 PTPRCP08575 1304 aa16.98■□□□□ 0.31
SGCA-206ENST00000508382 TESPA1A2RU30 521 aaPredicted RBP16.98■□□□□ 0.31
SGCA-206ENST00000508382 MNX1P50219 401 aaPredicted RBP16.98■□□□□ 0.31
SGCA-206ENST00000508382 PLBD2Q8NHP8 589 aa16.98■□□□□ 0.31
SGCA-206ENST00000508382 LRCH3Q96II8 777 aa16.98■□□□□ 0.31
SGCA-206ENST00000508382 XDHP47989 1333 aa16.97■□□□□ 0.31
SGCA-206ENST00000508382 HOXB7P09629 217 aa16.97■□□□□ 0.31
SGCA-206ENST00000508382 APOBEC3FQ8IUX4 373 aaKnown RBP16.97■□□□□ 0.31
SGCA-206ENST00000508382 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
SGCA-206ENST00000508382 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
SGCA-206ENST00000508382 PCDHAC2Q9Y5I4 1007 aa16.97■□□□□ 0.31
SGCA-206ENST00000508382 ALPK3Q96L96 1907 aa16.97■□□□□ 0.31
SGCA-206ENST00000508382 COL1A1P02452 1464 aaPredicted RBP16.97■□□□□ 0.31
SGCA-206ENST00000508382 NBPF11Q86T75 865 aa16.96■□□□□ 0.31
SGCA-206ENST00000508382 TXNRD3Q86VQ6 643 aa16.96■□□□□ 0.31
SGCA-206ENST00000508382 DPF3Q92784 378 aa16.96■□□□□ 0.31
SGCA-206ENST00000508382 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.31
SGCA-206ENST00000508382 ARHGAP39Q9C0H5 1083 aa16.96■□□□□ 0.31
SGCA-206ENST00000508382 DEFB129Q9H1M3 183 aa16.96■□□□□ 0.31
SGCA-206ENST00000508382 TSHZ2Q9NRE2 1034 aa16.96■□□□□ 0.31
SGCA-206ENST00000508382 AOX1Q06278 1338 aa16.96■□□□□ 0.3
SGCA-206ENST00000508382 MED23Q9ULK4 1368 aa16.95■□□□□ 0.3
SGCA-206ENST00000508382 ATP2B4P23634 1241 aa16.95■□□□□ 0.3
SGCA-206ENST00000508382 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
SGCA-206ENST00000508382 UBE2Q1Q7Z7E8 422 aa16.95■□□□□ 0.3
SGCA-206ENST00000508382 ITPRIPQ8IWB1 547 aa16.95■□□□□ 0.3
SGCA-206ENST00000508382 OGFOD1Q8N543 542 aa16.95■□□□□ 0.3
SGCA-206ENST00000508382 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
SGCA-206ENST00000508382 FBXW7Q969H0 707 aa16.95■□□□□ 0.3
SGCA-206ENST00000508382 MS4A4AQ96JQ5 239 aa16.95■□□□□ 0.3
SGCA-206ENST00000508382 VCANP13611 3396 aa16.94■□□□□ 0.3
SGCA-206ENST00000508382 MYH3P11055 1940 aa16.94■□□□□ 0.3
SGCA-206ENST00000508382 RLBP1P12271 317 aa16.94■□□□□ 0.3
SGCA-206ENST00000508382 MTFR1Q15390 333 aa16.94■□□□□ 0.3
SGCA-206ENST00000508382 STRIP1Q5VSL9 837 aa16.94■□□□□ 0.3
SGCA-206ENST00000508382 KIAA0825Q8IV33 1275 aa16.94■□□□□ 0.3
SGCA-206ENST00000508382 JARID2Q92833 1246 aaPredicted RBP16.94■□□□□ 0.3
SGCA-206ENST00000508382 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
SGCA-206ENST00000508382 RWDD1Q9H446 243 aaPredicted RBP16.94■□□□□ 0.3
SGCA-206ENST00000508382 USP2O75604 605 aaPredicted RBP16.93■□□□□ 0.3
SGCA-206ENST00000508382 TRIM28Q13263 835 aaKnown RBP16.93■□□□□ 0.3
SGCA-206ENST00000508382 NBPF12Q5TAG4 269 aaPredicted RBP16.93■□□□□ 0.3
SGCA-206ENST00000508382 MYO3BQ8WXR4 1341 aa16.93■□□□□ 0.3
SGCA-206ENST00000508382 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
SGCA-206ENST00000508382 OTUD7BQ6GQQ9 843 aa16.92■□□□□ 0.3
SGCA-206ENST00000508382 ZBTB38Q8NAP3 1195 aaPredicted RBP16.92■□□□□ 0.3
SGCA-206ENST00000508382 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
SGCA-206ENST00000508382 BRI3BPQ8WY22 251 aa16.92■□□□□ 0.3
SGCA-206ENST00000508382 SPTBN5Q9NRC6 3674 aaKnown RBP16.91■□□□□ 0.3
SGCA-206ENST00000508382 ZBTB7BO15156 539 aaPredicted RBP16.91■□□□□ 0.3
SGCA-206ENST00000508382 KLRK1P26718 216 aa16.91■□□□□ 0.3
SGCA-206ENST00000508382 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
SGCA-206ENST00000508382 PPP1R12BO60237 982 aaPredicted RBP16.9■□□□□ 0.3
SGCA-206ENST00000508382 FAM43AQ8N2R8 423 aa16.9■□□□□ 0.3
SGCA-206ENST00000508382 TMEM57Q8N5G2 664 aa16.9■□□□□ 0.3
SGCA-206ENST00000508382 COL25A1Q9BXS0 654 aaPredicted RBP16.9■□□□□ 0.3
SGCA-206ENST00000508382 UNCXA6NJT0 531 aa16.89■□□□□ 0.29
SGCA-206ENST00000508382 CTGFP29279 349 aa16.89■□□□□ 0.29
SGCA-206ENST00000508382 TAF1CQ15572 869 aaPredicted RBP16.89■□□□□ 0.29
SGCA-206ENST00000508382 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms