RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 MTMR14Q8NCE2 650 aa24.7■■□□□ 1.54
SFXN1-209ENST00000508290 MXD3Q9BW11 206 aa24.7■■□□□ 1.54
SFXN1-209ENST00000508290 TNNQ9UQP3 1299 aa24.7■■□□□ 1.54
SFXN1-209ENST00000508290 CELF2O95319 508 aaKnown RBP24.69■■□□□ 1.54
SFXN1-209ENST00000508290 DEFB115Q30KQ5 88 aa24.69■■□□□ 1.54
SFXN1-209ENST00000508290 ANGEL2Q5VTE6 544 aaKnown RBP24.69■■□□□ 1.54
SFXN1-209ENST00000508290 CST9Q5W186 159 aa24.69■■□□□ 1.54
SFXN1-209ENST00000508290 ITPRIPQ8IWB1 547 aa24.69■■□□□ 1.54
SFXN1-209ENST00000508290 HHIPL1Q96JK4 782 aa24.69■■□□□ 1.54
SFXN1-209ENST00000508290 SIL1Q9H173 461 aa24.69■■□□□ 1.54
SFXN1-209ENST00000508290 MKRN1Q9UHC7 482 aaKnown RBP24.69■■□□□ 1.54
SFXN1-209ENST00000508290 TLL2Q9Y6L7 1015 aa24.69■■□□□ 1.54
SFXN1-209ENST00000508290 WNT10BO00744 389 aa24.68■■□□□ 1.54
SFXN1-209ENST00000508290 FRAT2O75474 233 aaPredicted RBP24.68■■□□□ 1.54
SFXN1-209ENST00000508290 CERS5Q8N5B7 392 aa24.68■■□□□ 1.54
SFXN1-209ENST00000508290 TRPM7Q96QT4 1865 aa24.67■■□□□ 1.54
SFXN1-209ENST00000508290 ZBTB22O15209 634 aa24.67■■□□□ 1.54
SFXN1-209ENST00000508290 ECE1P42892 770 aa24.67■■□□□ 1.54
SFXN1-209ENST00000508290 ATP2B3Q16720 1220 aa24.67■■□□□ 1.54
SFXN1-209ENST00000508290 MFSD14BQ5SR56 506 aa24.67■■□□□ 1.54
SFXN1-209ENST00000508290 RCAN3Q9UKA8 241 aa24.67■■□□□ 1.54
SFXN1-209ENST00000508290 AKAP2Q9Y2D5 859 aa24.67■■□□□ 1.54
SFXN1-209ENST00000508290 DLGAP5Q15398 846 aa24.66■■□□□ 1.54
SFXN1-209ENST00000508290 APOBEC3FQ8IUX4 373 aaKnown RBP24.66■■□□□ 1.54
SFXN1-209ENST00000508290 CHMP4BQ9H444 224 aaKnown RBP24.66■■□□□ 1.54
SFXN1-209ENST00000508290 GNL3LQ9NVN8 582 aaKnown RBP24.66■■□□□ 1.54
SFXN1-209ENST00000508290 SUGT1Q9Y2Z0 365 aa24.66■■□□□ 1.54
SFXN1-209ENST00000508290 ZBTB7BO15156 539 aaPredicted RBP24.65■■□□□ 1.54
SFXN1-209ENST00000508290 MYO1BO43795 1136 aa24.65■■□□□ 1.54
SFXN1-209ENST00000508290 NBPF9Q3BBW0 867 aa24.65■■□□□ 1.54
SFXN1-209ENST00000508290 SAPCD2Q86UD0 394 aa24.65■■□□□ 1.54
SFXN1-209ENST00000508290 ZBED3Q96IU2 234 aaPredicted RBP24.65■■□□□ 1.54
SFXN1-209ENST00000508290 PA2G4Q9UQ80 394 aaKnown RBP24.65■■□□□ 1.54
SFXN1-209ENST00000508290 ADM5C9JUS6 153 aa24.64■■□□□ 1.54
SFXN1-209ENST00000508290 FMR1Q06787 632 aaKnown RBP eCLIP24.64■■□□□ 1.54
SFXN1-209ENST00000508290 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.64■■□□□ 1.54
SFXN1-209ENST00000508290 ZNF408Q9H9D4 720 aa24.64■■□□□ 1.54
SFXN1-209ENST00000508290 SERPINA10Q9UK55 444 aa24.64■■□□□ 1.54
SFXN1-209ENST00000508290 COL1A1P02452 1464 aaPredicted RBP24.64■■□□□ 1.53
SFXN1-209ENST00000508290 SEMA3EO15041 775 aa24.63■■□□□ 1.53
SFXN1-209ENST00000508290 RLBP1P12271 317 aa24.63■■□□□ 1.53
SFXN1-209ENST00000508290 BCAMP50895 628 aa24.63■■□□□ 1.53
SFXN1-209ENST00000508290 FKBP1BP68106 108 aa24.63■■□□□ 1.53
SFXN1-209ENST00000508290 C2orf69Q8N8R5 385 aa24.63■■□□□ 1.53
SFXN1-209ENST00000508290 MAST3O60307 1309 aa24.62■■□□□ 1.53
SFXN1-209ENST00000508290 ASTN2O75129 1339 aaPredicted RBP24.62■■□□□ 1.53
SFXN1-209ENST00000508290 VEGFBP49765 207 aa24.62■■□□□ 1.53
SFXN1-209ENST00000508290 HDLBPQ00341 1268 aaKnown RBP24.62■■□□□ 1.53
SFXN1-209ENST00000508290 WDR66Q8TBY9 1149 aa24.62■■□□□ 1.53
SFXN1-209ENST00000508290 CDCA5Q96FF9 252 aa24.62■■□□□ 1.53
SFXN1-209ENST00000508290 GBA2Q9HCG7 927 aaPredicted RBP24.62■■□□□ 1.53
SFXN1-209ENST00000508290 ATP8B2P98198 1209 aa24.61■■□□□ 1.53
SFXN1-209ENST00000508290 G3BP1Q13283 466 aaKnown RBP eCLIP24.61■■□□□ 1.53
SFXN1-209ENST00000508290 SSH3Q8TE77 659 aa24.61■■□□□ 1.53
SFXN1-209ENST00000508290 TTF2Q9UNY4 1162 aaKnown RBP24.61■■□□□ 1.53
SFXN1-209ENST00000508290 PPP2R3BQ9Y5P8 575 aa24.61■■□□□ 1.53
SFXN1-209ENST00000508290 PNMA6EA0A0J9YXQ4 647 aa24.6■■□□□ 1.53
SFXN1-209ENST00000508290 SPDYE2BA6NHP3 402 aa24.6■■□□□ 1.53
SFXN1-209ENST00000508290 F8W031 263 aaPredicted RBP24.6■■□□□ 1.53
SFXN1-209ENST00000508290 SPDYE6P0CI01 402 aa24.6■■□□□ 1.53
SFXN1-209ENST00000508290 POLA2Q14181 598 aa24.6■■□□□ 1.53
SFXN1-209ENST00000508290 CFAP100Q494V2 611 aa24.6■■□□□ 1.53
SFXN1-209ENST00000508290 MRIQ9BWK5 157 aa24.6■■□□□ 1.53
SFXN1-209ENST00000508290 DDX19BQ9UMR2 479 aa24.6■■□□□ 1.53
SFXN1-209ENST00000508290 JAG2Q9Y219 1238 aa24.6■■□□□ 1.53
SFXN1-209ENST00000508290 ARAP2Q8WZ64 1704 aa24.6■■□□□ 1.53
SFXN1-209ENST00000508290 WDR33Q9C0J8 1336 aaKnown RBP24.6■■□□□ 1.53
SFXN1-209ENST00000508290 NF2P35240 595 aa24.59■■□□□ 1.53
SFXN1-209ENST00000508290 CHAF1AQ13111 956 aaPredicted RBP24.59■■□□□ 1.53
SFXN1-209ENST00000508290 CAPNS2Q96L46 248 aa24.59■■□□□ 1.53
SFXN1-209ENST00000508290 MVPQ14764 893 aaKnown RBP24.58■■□□□ 1.53
SFXN1-209ENST00000508290 PANK1Q8TE04 598 aa24.58■■□□□ 1.53
SFXN1-209ENST00000508290 DENND2AQ9ULE3 1009 aa24.58■■□□□ 1.53
SFXN1-209ENST00000508290 IQSEC3Q9UPP2 1182 aaPredicted RBP24.58■■□□□ 1.53
SFXN1-209ENST00000508290 PDS5AQ29RF7 1337 aaKnown RBP24.58■■□□□ 1.52
SFXN1-209ENST00000508290 RBM5P52756 815 aaKnown RBP eCLIP24.57■■□□□ 1.52
SFXN1-209ENST00000508290 HUNKP57058 714 aa24.57■■□□□ 1.52
SFXN1-209ENST00000508290 PDE3AQ14432 1141 aa24.57■■□□□ 1.52
SFXN1-209ENST00000508290 PAXIP1Q6ZW49 1069 aaPredicted RBP24.57■■□□□ 1.52
SFXN1-209ENST00000508290 A0A1B0GUL7 405 aa24.56■■□□□ 1.52
SFXN1-209ENST00000508290 MAP2K2P36507 400 aa24.56■■□□□ 1.52
SFXN1-209ENST00000508290 MAP2K1Q02750 393 aaPredicted RBP24.56■■□□□ 1.52
SFXN1-209ENST00000508290 TFCP2Q12800 502 aa24.56■■□□□ 1.52
SFXN1-209ENST00000508290 TNFAIP1Q13829 316 aa24.56■■□□□ 1.52
SFXN1-209ENST00000508290 ZGPATQ8N5A5 531 aaKnown RBP24.56■■□□□ 1.52
SFXN1-209ENST00000508290 GPR108Q9NPR9 543 aa24.56■■□□□ 1.52
SFXN1-209ENST00000508290 SALL1Q9NSC2 1324 aa24.56■■□□□ 1.52
SFXN1-209ENST00000508290 CCDC102BQ68D86 513 aa24.55■■□□□ 1.52
SFXN1-209ENST00000508290 TEKT1Q969V4 418 aa24.55■■□□□ 1.52
SFXN1-209ENST00000508290 NOP58Q9Y2X3 529 aaKnown RBP24.55■■□□□ 1.52
SFXN1-209ENST00000508290 THSD7BQ9C0I4 1608 aa24.54■■□□□ 1.52
SFXN1-209ENST00000508290 CRKP46108 304 aa24.54■■□□□ 1.52
SFXN1-209ENST00000508290 CCDC102AQ96A19 550 aa24.54■■□□□ 1.52
SFXN1-209ENST00000508290 PRMT6Q96LA8 375 aaPredicted RBP24.54■■□□□ 1.52
SFXN1-209ENST00000508290 PAPPA2Q9BXP8 1791 aa24.53■■□□□ 1.52
SFXN1-209ENST00000508290 HSPA1AP0DMV8 641 aaKnown RBP24.53■■□□□ 1.52
SFXN1-209ENST00000508290 HSPA1BP0DMV9 641 aaKnown RBP24.53■■□□□ 1.52
SFXN1-209ENST00000508290 NOGQ13253 232 aa24.53■■□□□ 1.52
SFXN1-209ENST00000508290 OS9Q13438 667 aaPredicted RBP24.53■■□□□ 1.52
SFXN1-209ENST00000508290 CYP4F22Q6NT55 531 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms