RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PAPPA2Q9BXP8 1791 aa17.96■□□□□ 0.47
RAB28-205ENST00000508274 CT47B1P0C2W7 299 aaPredicted RBP17.96■□□□□ 0.46
RAB28-205ENST00000508274 RGMBQ6NW40 437 aa17.96■□□□□ 0.46
RAB28-205ENST00000508274 TSKSQ9UJT2 592 aa17.96■□□□□ 0.46
RAB28-205ENST00000508274 PCDHAC2Q9Y5I4 1007 aa17.96■□□□□ 0.46
RAB28-205ENST00000508274 FAM155AB1AL88 458 aaPredicted RBP17.95■□□□□ 0.46
RAB28-205ENST00000508274 F8W031 263 aaPredicted RBP17.95■□□□□ 0.46
RAB28-205ENST00000508274 GYG1P46976 350 aa17.95■□□□□ 0.46
RAB28-205ENST00000508274 UBE4AQ14139 1066 aa17.95■□□□□ 0.46
RAB28-205ENST00000508274 MIER1Q8N108 512 aa17.95■□□□□ 0.46
RAB28-205ENST00000508274 HDAC9Q9UKV0 1011 aa17.95■□□□□ 0.46
RAB28-205ENST00000508274 ARAP2Q8WZ64 1704 aa17.94■□□□□ 0.46
RAB28-205ENST00000508274 MROH5Q6ZUA9 1318 aa17.94■□□□□ 0.46
RAB28-205ENST00000508274 CAPN15O75808 1086 aa17.94■□□□□ 0.46
RAB28-205ENST00000508274 ZBED3Q96IU2 234 aaPredicted RBP17.94■□□□□ 0.46
RAB28-205ENST00000508274 RARSP54136 660 aaKnown RBP17.93■□□□□ 0.46
RAB28-205ENST00000508274 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
RAB28-205ENST00000508274 NOGQ13253 232 aa17.93■□□□□ 0.46
RAB28-205ENST00000508274 MOB2Q70IA6 237 aa17.93■□□□□ 0.46
RAB28-205ENST00000508274 FAM84BQ96KN1 310 aaPredicted RBP17.93■□□□□ 0.46
RAB28-205ENST00000508274 BEGAINQ9BUH8 593 aa17.93■□□□□ 0.46
RAB28-205ENST00000508274 ZNF157P51786 506 aaPredicted RBP17.92■□□□□ 0.46
RAB28-205ENST00000508274 METTL24Q5JXM2 366 aa17.92■□□□□ 0.46
RAB28-205ENST00000508274 VGLL2Q8N8G2 317 aa17.92■□□□□ 0.46
RAB28-205ENST00000508274 TDRD7Q8NHU6 1098 aaKnown RBP17.92■□□□□ 0.46
RAB28-205ENST00000508274 HIBADHP31937 336 aaKnown RBP17.91■□□□□ 0.46
RAB28-205ENST00000508274 RFX5P48382 616 aaPredicted RBP17.91■□□□□ 0.46
RAB28-205ENST00000508274 MMP14P50281 582 aa17.91■□□□□ 0.46
RAB28-205ENST00000508274 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
RAB28-205ENST00000508274 AOX1Q06278 1338 aa17.91■□□□□ 0.46
RAB28-205ENST00000508274 FKBP1AP62942 108 aaKnown RBP17.91■□□□□ 0.46
RAB28-205ENST00000508274 DLGAP5Q15398 846 aa17.91■□□□□ 0.46
RAB28-205ENST00000508274 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
RAB28-205ENST00000508274 IQSEC3Q9UPP2 1182 aaPredicted RBP17.91■□□□□ 0.46
RAB28-205ENST00000508274 FAM205AQ6ZU69 1335 aa17.9■□□□□ 0.46
RAB28-205ENST00000508274 PDE8BO95263 885 aa17.9■□□□□ 0.46
RAB28-205ENST00000508274 SLC10A3P09131 477 aa17.9■□□□□ 0.46
RAB28-205ENST00000508274 UBTFL1P0CB47 393 aaPredicted RBP17.9■□□□□ 0.46
RAB28-205ENST00000508274 CFAP100Q494V2 611 aa17.9■□□□□ 0.46
RAB28-205ENST00000508274 CASP8AP2Q9UKL3 1982 aa17.89■□□□□ 0.46
RAB28-205ENST00000508274 PTPN12Q05209 780 aaKnown RBP17.89■□□□□ 0.45
RAB28-205ENST00000508274 MFSD14BQ5SR56 506 aa17.89■□□□□ 0.45
RAB28-205ENST00000508274 APOBEC3FQ8IUX4 373 aaKnown RBP17.89■□□□□ 0.45
RAB28-205ENST00000508274 CCDC102AQ96A19 550 aa17.89■□□□□ 0.45
RAB28-205ENST00000508274 MYH13Q9UKX3 1938 aa17.89■□□□□ 0.45
RAB28-205ENST00000508274 UBE2Q2LH0YL09 131 aa17.88■□□□□ 0.45
RAB28-205ENST00000508274 FKBP1BP68106 108 aa17.88■□□□□ 0.45
RAB28-205ENST00000508274 KIF23Q02241 960 aaPredicted RBP17.88■□□□□ 0.45
RAB28-205ENST00000508274 RASAL3Q86YV0 1011 aa17.88■□□□□ 0.45
RAB28-205ENST00000508274 MTMR14Q8NCE2 650 aa17.88■□□□□ 0.45
RAB28-205ENST00000508274 MEIS3Q99687 375 aa17.88■□□□□ 0.45
RAB28-205ENST00000508274 TNNQ9UQP3 1299 aa17.88■□□□□ 0.45
RAB28-205ENST00000508274 AKAP11Q9UKA4 1901 aa17.88■□□□□ 0.45
RAB28-205ENST00000508274 KIF16BQ96L93 1317 aa17.88■□□□□ 0.45
RAB28-205ENST00000508274 CLRN2A0PK11 232 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 SPDYE2BA6NHP3 402 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 EYA2O00167 538 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 SPDYE6P0CI01 402 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 FBXO33Q7Z6M2 555 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 PRMT6Q96LA8 375 aaPredicted RBP17.87■□□□□ 0.45
RAB28-205ENST00000508274 LRRFIP2Q9Y608 721 aaKnown RBP17.87■□□□□ 0.45
RAB28-205ENST00000508274 BCAR3O75815 825 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 FGFR2P21802 821 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 PRKG1Q13976 671 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 TTLL12Q14166 644 aaPredicted RBP17.87■□□□□ 0.45
RAB28-205ENST00000508274 GRIK5Q16478 980 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 ATG9AQ7Z3C6 839 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 VPS37DQ86XT2 251 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 SIL1Q9H173 461 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 FZD1Q9UP38 647 aa17.87■□□□□ 0.45
RAB28-205ENST00000508274 CA12O43570 354 aa17.86■□□□□ 0.45
RAB28-205ENST00000508274 BCAMP50895 628 aa17.86■□□□□ 0.45
RAB28-205ENST00000508274 RBM5P52756 815 aaKnown RBP eCLIP17.86■□□□□ 0.45
RAB28-205ENST00000508274 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
RAB28-205ENST00000508274 CHAF1AQ13111 956 aaPredicted RBP17.86■□□□□ 0.45
RAB28-205ENST00000508274 DEFB129Q9H1M3 183 aa17.86■□□□□ 0.45
RAB28-205ENST00000508274 TTF2Q9UNY4 1162 aaKnown RBP17.86■□□□□ 0.45
RAB28-205ENST00000508274 COL1A1P02452 1464 aaPredicted RBP17.86■□□□□ 0.45
RAB28-205ENST00000508274 SSC5DA1L4H1 1573 aa17.86■□□□□ 0.45
RAB28-205ENST00000508274 NF2P35240 595 aa17.85■□□□□ 0.45
RAB28-205ENST00000508274 PUM3Q15397 648 aaKnown RBP17.85■□□□□ 0.45
RAB28-205ENST00000508274 CAVIN4Q5BKX8 364 aa17.85■□□□□ 0.45
RAB28-205ENST00000508274 VEZTQ9HBM0 779 aa17.85■□□□□ 0.45
RAB28-205ENST00000508274 INTS3Q68E01 1043 aaKnown RBP17.84■□□□□ 0.45
RAB28-205ENST00000508274 ARHGAP45Q92619 1136 aa17.84■□□□□ 0.45
RAB28-205ENST00000508274 PA2G4Q9UQ80 394 aaKnown RBP17.84■□□□□ 0.45
RAB28-205ENST00000508274 MYO1BO43795 1136 aa17.83■□□□□ 0.45
RAB28-205ENST00000508274 FRAT2O75474 233 aaPredicted RBP17.83■□□□□ 0.45
RAB28-205ENST00000508274 TRIM27P14373 513 aa17.83■□□□□ 0.45
RAB28-205ENST00000508274 CSRNP1Q96S65 589 aa17.83■□□□□ 0.45
RAB28-205ENST00000508274 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.44
RAB28-205ENST00000508274 FRAT1Q92837 279 aaPredicted RBP17.83■□□□□ 0.44
RAB28-205ENST00000508274 CRKP46108 304 aa17.82■□□□□ 0.44
RAB28-205ENST00000508274 MKRN3Q13064 507 aaKnown RBP17.82■□□□□ 0.44
RAB28-205ENST00000508274 CLUAP1Q96AJ1 413 aa17.82■□□□□ 0.44
RAB28-205ENST00000508274 TDRD3Q9H7E2 651 aaKnown RBP17.82■□□□□ 0.44
RAB28-205ENST00000508274 SERPINA10Q9UK55 444 aa17.82■□□□□ 0.44
RAB28-205ENST00000508274 ANGEL1Q9UNK9 670 aaKnown RBP17.82■□□□□ 0.44
RAB28-205ENST00000508274 TRPA1O75762 1119 aa17.81■□□□□ 0.44
RAB28-205ENST00000508274 SLC5A1P13866 664 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms