RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SEMA3EO15041 775 aa18.48■□□□□ 0.55
RNF4-210ENST00000508235 RAB11FIP3O75154 756 aa18.48■□□□□ 0.55
RNF4-210ENST00000508235 FSTL1Q12841 308 aa18.48■□□□□ 0.55
RNF4-210ENST00000508235 TBC1D22AQ8WUA7 517 aa18.48■□□□□ 0.55
RNF4-210ENST00000508235 GMLQ99445 158 aa18.48■□□□□ 0.55
RNF4-210ENST00000508235 HDAC9Q9UKV0 1011 aa18.48■□□□□ 0.55
RNF4-210ENST00000508235 ZBTB22O15209 634 aa18.47■□□□□ 0.55
RNF4-210ENST00000508235 TNNI3KQ59H18 835 aa18.47■□□□□ 0.55
RNF4-210ENST00000508235 GORABQ5T7V8 394 aa18.47■□□□□ 0.55
RNF4-210ENST00000508235 XAGE2Q96GT9 111 aa18.47■□□□□ 0.55
RNF4-210ENST00000508235 FPGT-TNNI3KV9GXZ4 949 aa18.47■□□□□ 0.55
RNF4-210ENST00000508235 ADAMTSL1Q8N6G6 1762 aa18.47■□□□□ 0.55
RNF4-210ENST00000508235 ZNF280AP59817 542 aaPredicted RBP18.46■□□□□ 0.55
RNF4-210ENST00000508235 C1QTNF8P60827 252 aa18.46■□□□□ 0.55
RNF4-210ENST00000508235 CCDC102BQ68D86 513 aa18.46■□□□□ 0.55
RNF4-210ENST00000508235 CHADLQ6NUI6 762 aa18.46■□□□□ 0.55
RNF4-210ENST00000508235 KIF1BPQ96EK5 621 aa18.46■□□□□ 0.55
RNF4-210ENST00000508235 DENND2AQ9ULE3 1009 aa18.46■□□□□ 0.55
RNF4-210ENST00000508235 CLEC11AQ9Y240 323 aa18.46■□□□□ 0.55
RNF4-210ENST00000508235 ADORA1P30542 326 aa18.45■□□□□ 0.54
RNF4-210ENST00000508235 KIF4BQ2VIQ3 1234 aa18.45■□□□□ 0.54
RNF4-210ENST00000508235 MFSD14BQ5SR56 506 aa18.45■□□□□ 0.54
RNF4-210ENST00000508235 WDR66Q8TBY9 1149 aa18.45■□□□□ 0.54
RNF4-210ENST00000508235 RHPN1Q8TCX5 695 aa18.45■□□□□ 0.54
RNF4-210ENST00000508235 ZC3H15Q8WU90 426 aaKnown RBP18.45■□□□□ 0.54
RNF4-210ENST00000508235 MXD3Q9BW11 206 aa18.45■□□□□ 0.54
RNF4-210ENST00000508235 IQSEC3Q9UPP2 1182 aaPredicted RBP18.45■□□□□ 0.54
RNF4-210ENST00000508235 PHKA1P46020 1223 aa18.44■□□□□ 0.54
RNF4-210ENST00000508235 CHAF1AQ13111 956 aaPredicted RBP18.44■□□□□ 0.54
RNF4-210ENST00000508235 KIAA0825Q8IV33 1275 aa18.44■□□□□ 0.54
RNF4-210ENST00000508235 CLASRPQ8N2M8 674 aaKnown RBP18.44■□□□□ 0.54
RNF4-210ENST00000508235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.44■□□□□ 0.54
RNF4-210ENST00000508235 SHTN1A0MZ66 631 aa18.43■□□□□ 0.54
RNF4-210ENST00000508235 UQCRFS1P1P0C7P4 283 aa18.43■□□□□ 0.54
RNF4-210ENST00000508235 CCDC158Q5M9N0 1113 aa18.43■□□□□ 0.54
RNF4-210ENST00000508235 SAMD7Q7Z3H4 446 aa18.43■□□□□ 0.54
RNF4-210ENST00000508235 CERS5Q8N5B7 392 aa18.43■□□□□ 0.54
RNF4-210ENST00000508235 MYOZ2Q9NPC6 264 aa18.43■□□□□ 0.54
RNF4-210ENST00000508235 JAG2Q9Y219 1238 aa18.43■□□□□ 0.54
RNF4-210ENST00000508235 SUGT1Q9Y2Z0 365 aa18.43■□□□□ 0.54
RNF4-210ENST00000508235 PCDHB15Q9Y5E8 787 aa18.43■□□□□ 0.54
RNF4-210ENST00000508235 PDS5AQ29RF7 1337 aaKnown RBP18.43■□□□□ 0.54
RNF4-210ENST00000508235 POTEIP0CG38 1075 aa18.42■□□□□ 0.54
RNF4-210ENST00000508235 POTEJP0CG39 1038 aa18.42■□□□□ 0.54
RNF4-210ENST00000508235 TBC1D10BQ4KMP7 808 aaPredicted RBP18.42■□□□□ 0.54
RNF4-210ENST00000508235 RBM26Q5T8P6 1007 aaKnown RBP18.42■□□□□ 0.54
RNF4-210ENST00000508235 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
RNF4-210ENST00000508235 TRPM4Q8TD43 1214 aa18.42■□□□□ 0.54
RNF4-210ENST00000508235 DCTPP1Q9H773 170 aa18.42■□□□□ 0.54
RNF4-210ENST00000508235 MAST3O60307 1309 aa18.42■□□□□ 0.54
RNF4-210ENST00000508235 APBB1O00213 710 aa18.41■□□□□ 0.54
RNF4-210ENST00000508235 AACSQ86V21 672 aa18.41■□□□□ 0.54
RNF4-210ENST00000508235 PGAP2Q9UHJ9 254 aa18.41■□□□□ 0.54
RNF4-210ENST00000508235 SALL1Q9NSC2 1324 aa18.41■□□□□ 0.54
RNF4-210ENST00000508235 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
RNF4-210ENST00000508235 HIRAP54198 1017 aaPredicted RBP18.4■□□□□ 0.54
RNF4-210ENST00000508235 TTC39AQ5SRH9 613 aa18.4■□□□□ 0.54
RNF4-210ENST00000508235 CNTROBQ8N137 903 aa18.4■□□□□ 0.54
RNF4-210ENST00000508235 EAF2Q96CJ1 260 aaPredicted RBP18.4■□□□□ 0.54
RNF4-210ENST00000508235 DBNDD2Q9BQY9 259 aa18.4■□□□□ 0.54
RNF4-210ENST00000508235 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
RNF4-210ENST00000508235 IL1RAPL2Q9NP60 686 aa18.4■□□□□ 0.54
RNF4-210ENST00000508235 TTF2Q9UNY4 1162 aaKnown RBP18.4■□□□□ 0.54
RNF4-210ENST00000508235 F8W031 263 aaPredicted RBP18.39■□□□□ 0.53
RNF4-210ENST00000508235 IFIT2P09913 472 aaKnown RBP18.39■□□□□ 0.53
RNF4-210ENST00000508235 RASGRF1Q13972 1273 aa18.39■□□□□ 0.53
RNF4-210ENST00000508235 DLGAP5Q15398 846 aa18.39■□□□□ 0.53
RNF4-210ENST00000508235 EXOC6Q8TAG9 804 aa18.39■□□□□ 0.53
RNF4-210ENST00000508235 DCPSQ96C86 337 aaKnown RBP18.39■□□□□ 0.53
RNF4-210ENST00000508235 ZNF512BQ96KM6 892 aaPredicted RBP18.39■□□□□ 0.53
RNF4-210ENST00000508235 CCDC8Q9H0W5 538 aaPredicted RBP18.39■□□□□ 0.53
RNF4-210ENST00000508235 SERPINA10Q9UK55 444 aa18.39■□□□□ 0.53
RNF4-210ENST00000508235 ECM29Q5VYK3 1845 aa18.39■□□□□ 0.53
RNF4-210ENST00000508235 COL1A1P02452 1464 aaPredicted RBP18.39■□□□□ 0.53
RNF4-210ENST00000508235 MYO1BO43795 1136 aa18.38■□□□□ 0.53
RNF4-210ENST00000508235 EGFRP00533 1210 aa18.38■□□□□ 0.53
RNF4-210ENST00000508235 HDLBPQ00341 1268 aaKnown RBP18.38■□□□□ 0.53
RNF4-210ENST00000508235 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
RNF4-210ENST00000508235 MAP1SQ66K74 1059 aaPredicted RBP18.38■□□□□ 0.53
RNF4-210ENST00000508235 SPATA5Q8NB90 893 aa18.38■□□□□ 0.53
RNF4-210ENST00000508235 MTMR14Q8NCE2 650 aa18.38■□□□□ 0.53
RNF4-210ENST00000508235 MRIQ9BWK5 157 aa18.38■□□□□ 0.53
RNF4-210ENST00000508235 DBNLQ9UJU6 430 aaKnown RBP18.38■□□□□ 0.53
RNF4-210ENST00000508235 SCARF1Q14162 830 aa18.37■□□□□ 0.53
RNF4-210ENST00000508235 SPTY2D1Q68D10 685 aaPredicted RBP18.37■□□□□ 0.53
RNF4-210ENST00000508235 CDC37L1Q7L3B6 337 aa18.37■□□□□ 0.53
RNF4-210ENST00000508235 RWDD1Q9H446 243 aaPredicted RBP18.37■□□□□ 0.53
RNF4-210ENST00000508235 POLR2AP24928 1970 aaKnown RBP18.37■□□□□ 0.53
RNF4-210ENST00000508235 WNT10BO00744 389 aa18.36■□□□□ 0.53
RNF4-210ENST00000508235 LDHBP07195 334 aaKnown RBP18.36■□□□□ 0.53
RNF4-210ENST00000508235 RBM5P52756 815 aaKnown RBP eCLIP18.36■□□□□ 0.533e-6■□□□□ 9.3
RNF4-210ENST00000508235 TEKT1Q969V4 418 aa18.36■□□□□ 0.53
RNF4-210ENST00000508235 GCC1Q96CN9 775 aa18.36■□□□□ 0.53
RNF4-210ENST00000508235 PITPNM2Q9BZ72 1349 aa18.36■□□□□ 0.53
RNF4-210ENST00000508235 HMG20BQ9P0W2 317 aa18.36■□□□□ 0.53
RNF4-210ENST00000508235 ZBTB47Q9UFB7 747 aaPredicted RBP18.36■□□□□ 0.53
RNF4-210ENST00000508235 ITGBL1O95965 494 aaPredicted RBP18.35■□□□□ 0.53
RNF4-210ENST00000508235 CENPBP07199 599 aaPredicted RBP18.35■□□□□ 0.53
RNF4-210ENST00000508235 CFAP100Q494V2 611 aa18.35■□□□□ 0.53
RNF4-210ENST00000508235 SULF1Q8IWU6 871 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms