RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TMEM51Q9NW97 253 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 FAM13AO94988 1023 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 MPSTP25325 297 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 DNAJB2P25686 324 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 UBA7P41226 1012 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 SNX16P57768 344 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 FKBP5Q13451 457 aaPredicted RBP8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 BIRC3Q13489 604 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 DDB1Q16531 1140 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 MZT2AQ6P582 158 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 BRSK2Q8IWQ3 736 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 STRBPQ96SI9 672 aaKnown RBP8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 IWS1Q96ST2 819 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 CSRNP2Q9H175 543 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 ZSWIM6Q9HCJ5 1215 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 PNMA6FA0A0J9YX94 578 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 PGRP06401 933 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 DDIT3P35638 169 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 APOBRQ0VD83 1088 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 NAA30Q147X3 362 aaPredicted RBP8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 TCEA2Q15560 299 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 DACT2Q5SW24 774 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 PADI6Q6TGC4 694 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 WAPLQ7Z5K2 1190 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 ARHGEF25Q86VW2 580 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 PJA1Q8NG27 643 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 FBF1Q8TES7 1133 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 VMP1Q96GC9 406 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 PLCB1Q9NQ66 1216 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 SMTNL1A8MU46 457 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 VSTM5A8MXK1 200 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 ASMTLO95671 621 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 NAP1L1P55209 391 aaKnown RBP8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 TTLL5Q6EMB2 1281 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 ZNF449Q6P9G9 518 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 SYMPKQ92797 1274 aaKnown RBP8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 SH3KBP1Q96B97 665 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 AP1M1Q9BXS5 423 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 GTF2IRD1Q9UHL9 959 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 PLAAQ9Y263 795 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 AK5Q9Y6K8 562 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 USP31Q70CQ4 1352 aa8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 BAZ1AQ9NRL2 1556 aaPredicted RBP8.92□□□□□ -0.98
PDGFRA-206ENST00000508170 WASHC2AQ641Q2 1341 aa8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 ERICH4A6NGS2 130 aa8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 GOLGA6L22H0YM25 854 aa8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 INMTO95050 263 aa8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 MYCLP1P12525 358 aaPredicted RBP8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 SLC5A1P13866 664 aa8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 CT47A1Q5JQC4 288 aaPredicted RBP8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 C16orf87Q6PH81 154 aa8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 CELF2-AS1Q8N7Q2 184 aa8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 EIF2AK1Q9BQI3 630 aaKnown RBP8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 SARGQ9BW04 601 aa8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 OSBPL5Q9H0X9 879 aaPredicted RBP8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 WIZO95785 1651 aa8.91□□□□□ -0.98
PDGFRA-206ENST00000508170 CFAP99D6REC4 459 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 PRR29P0C7W0 189 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 STT3AP46977 705 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 C2orf27AQ580R0 203 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 RSRC2Q7L4I2 434 aaKnown RBP8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 PLPP7Q8NBV4 271 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 TPCN2Q8NHX9 752 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 HOOK2Q96ED9 719 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 CITED4Q96RK1 184 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 CFHR5Q9BXR6 569 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 OBP2AQ9NY56 170 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 DGKBQ9Y6T7 804 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 IFRD2Q12894 506 aaPredicted RBP8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 CHAF1AQ13111 956 aaPredicted RBP8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 LAMC2Q13753 1193 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 TM4SF20Q53R12 229 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 ANKRD45Q5TZF3 282 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 ALG1LQ6GMV1 187 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 SPAG5Q96R06 1193 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 FAM129BQ96TA1 746 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 PAIP2Q9BPZ3 127 aaKnown RBP8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 ELAC2Q9BQ52 826 aaKnown RBP8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 TSKSQ9UJT2 592 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 PCDHGC3Q9UN70 934 aa8.9□□□□□ -0.98
PDGFRA-206ENST00000508170 TYRP1P17643 537 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 CD151P48509 253 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 CALD1Q05682 793 aaKnown RBP8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 KIAA2012Q0VF49 1180 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 MZT2BQ6NZ67 158 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 SAMD14Q8IZD0 417 aaPredicted RBP8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 CDK5RAP3Q96JB5 506 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 CCDC113Q9H0I3 377 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 CAAP1Q9H8G2 361 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 COPRSQ9NQ92 184 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 CEP131Q9UPN4 1083 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 MAGED1Q9Y5V3 778 aaPredicted RBP8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 FAM170AA1A519 330 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 RXRGP48443 463 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 DGKGP49619 791 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 BPIFB3P59826 476 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 STK3Q13188 491 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 TRIM29Q14134 588 aa8.89□□□□□ -0.99
PDGFRA-206ENST00000508170 SLC10A5Q5PT55 438 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms