RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 RAB11FIP4Q86YS3 637 aa15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 ZNF274Q96GC6 653 aaPredicted RBP15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 M0R2C6 588 aa15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 STK38Q15208 465 aa15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 SF3A1Q15459 793 aaKnown RBP15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 TERF2Q15554 542 aa15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 ERCC6LQ2NKX8 1250 aa15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 ATG9AQ7Z3C6 839 aa15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 IMPACTQ9P2X3 320 aa15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 ISM2Q6H9L7 571 aa15.62■□□□□ 0.09
SNCAIP-209ENST00000508017 A0A1W2PQ27 194 aa15.62■□□□□ 0.09
SNCAIP-209ENST00000508017 A0A1W2PQ64 194 aa15.62■□□□□ 0.09
SNCAIP-209ENST00000508017 A0A1W2PQD8 194 aa15.62■□□□□ 0.09
SNCAIP-209ENST00000508017 NWD2Q9ULI1 1742 aa15.61■□□□□ 0.09
SNCAIP-209ENST00000508017 HAND2P61296 217 aa15.61■□□□□ 0.09
SNCAIP-209ENST00000508017 FOXO4P98177 505 aa15.61■□□□□ 0.09
SNCAIP-209ENST00000508017 NCAPHQ15003 741 aa15.61■□□□□ 0.09
SNCAIP-209ENST00000508017 L2HGDHQ9H9P8 463 aa15.61■□□□□ 0.09
SNCAIP-209ENST00000508017 SFPQP23246 707 aaKnown RBP eCLIP15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 ZRSR1Q15695 479 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 CCDC150Q8NCX0 1101 aa15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 KIF28PB7ZC32 967 aa15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 KIF2AO00139 706 aaPredicted RBP15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 SPTLC2O15270 562 aa15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 SLC3A2P08195 630 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 PHKG2P15735 406 aa15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 ZNF594Q96JF6 807 aaPredicted RBP15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 C8orf76Q96K31 380 aa15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 BPIFA3Q9BQP9 254 aa15.6■□□□□ 0.09
SNCAIP-209ENST00000508017 RNF113AO15541 343 aaKnown RBP15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 ZNF202O95125 648 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 SNRPA1P09661 255 aaKnown RBP15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 LMOD1P29536 600 aaPredicted RBP15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 ZC3H6P61129 1189 aaKnown RBP15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 LRRC24Q50LG9 513 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 RAPGEF4Q8WZA2 1011 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 OSBP2Q969R2 916 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 MROH7-TTC4A0A0A0MT08 1334 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 IFIT1P09914 478 aaKnown RBP15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 ATP1A3P13637 1013 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 H2AFXP16104 143 aaPredicted RBP15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 NLRP12P59046 1061 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 CCDC93Q567U6 631 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 MYSM1Q5VVJ2 828 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 KCNG4Q8TDN1 519 aa15.59■□□□□ 0.09
SNCAIP-209ENST00000508017 FOXP2O15409 715 aa15.58■□□□□ 0.09
SNCAIP-209ENST00000508017 GORABQ5T7V8 394 aa15.58■□□□□ 0.09
SNCAIP-209ENST00000508017 POLR3EQ9NVU0 708 aa15.58■□□□□ 0.09
SNCAIP-209ENST00000508017 NLRP2Q9NX02 1062 aa15.58■□□□□ 0.09
SNCAIP-209ENST00000508017 HPS5Q9UPZ3 1129 aa15.58■□□□□ 0.09
SNCAIP-209ENST00000508017 KLF18A0A0U1RQI7 1052 aa15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 PSDA5PKW4 1024 aaPredicted RBP15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 YEATS4O95619 227 aa15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 PFKFB1P16118 471 aa15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 PTPN21Q16825 1174 aa15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 HSP90AB3PQ58FF7 597 aa15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 TTC5Q8N0Z6 440 aa15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 FBXO18Q8NFZ0 1043 aa15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 HSD3B7Q9H2F3 369 aa15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 ORC3Q9UBD5 711 aaPredicted RBP15.58■□□□□ 0.08
SNCAIP-209ENST00000508017 GOLGA8BA8MQT2 603 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 EVCP57679 992 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 FANCCQ00597 558 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 AXDND1Q5T1B0 1012 aaPredicted RBP15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 DPF2Q92785 391 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 TAOK2Q9UL54 1235 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 MEGF6O75095 1541 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 PRC1O43663 620 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 WDHD1O75717 1129 aaPredicted RBP15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 MARCKSP29966 332 aaPredicted RBP15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 CLCN6P51797 869 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 GOLGA8FQ08AF8 430 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 GOLGA8DPQ0D2H9 430 aa15.57■□□□□ 0.08
SNCAIP-209ENST00000508017 A0A1B0GUL7 405 aa15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 HOMER1Q86YM7 354 aa15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 PLBD2Q8NHP8 589 aa15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 PUS3Q9BZE2 481 aaKnown RBP15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 H7C1W4 665 aa15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 FANCGO15287 622 aa15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 FKBP4Q02790 459 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 ANO1Q5XXA6 986 aa15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 AIFM3Q96NN9 605 aa15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 DNAI1Q9UI46 699 aa15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 FHOD1Q9Y613 1164 aa15.56■□□□□ 0.08
SNCAIP-209ENST00000508017 A0A0U1RQG5 324 aaPredicted RBP15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 ERICH4A6NGS2 130 aa15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 KCNJ6P48051 423 aa15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 ANTXR2P58335 489 aa15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 TPM4P67936 248 aa15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 KIF23Q02241 960 aaPredicted RBP15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 ARHGAP29Q52LW3 1261 aa15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 TATP17735 454 aaPredicted RBP15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 IL15P40933 162 aaPredicted RBP15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 SYNE3Q6ZMZ3 975 aa15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 TTLL7Q6ZT98 887 aa15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 FBXL16Q8N461 479 aa15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 GPR108Q9NPR9 543 aa15.55■□□□□ 0.08
SNCAIP-209ENST00000508017 TJP1Q07157 1748 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms