RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 TJP1Q07157 1748 aa7.75□□□□□ -1.17
ATXN3-210ENST00000507965 CICQ96RK0 1608 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-210ENST00000507965 PROCP04070 461 aa7.74□□□□□ -1.17
ATXN3-210ENST00000507965 ITGB2P05107 769 aa7.74□□□□□ -1.17
ATXN3-210ENST00000507965 MX2P20592 715 aa7.74□□□□□ -1.17
ATXN3-210ENST00000507965 AMIGO3Q86WK7 504 aa7.74□□□□□ -1.17
ATXN3-210ENST00000507965 CYP27B1O15528 508 aa7.73□□□□□ -1.17
ATXN3-210ENST00000507965 TATP17735 454 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-210ENST00000507965 C1QTNF8P60827 252 aa7.73□□□□□ -1.17
ATXN3-210ENST00000507965 TMF1P82094 1093 aa7.73□□□□□ -1.17
ATXN3-210ENST00000507965 SH3D19Q5HYK7 790 aa7.73□□□□□ -1.17
ATXN3-210ENST00000507965 SMIM5Q71RC9 77 aa7.73□□□□□ -1.17
ATXN3-210ENST00000507965 PROCA1Q8NCQ7 364 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-210ENST00000507965 RAPGEF4Q8WZA2 1011 aa7.73□□□□□ -1.17
ATXN3-210ENST00000507965 CGNL1Q0VF96 1302 aa7.73□□□□□ -1.17
ATXN3-210ENST00000507965 KIF24Q5T7B8 1368 aa7.72□□□□□ -1.17
ATXN3-210ENST00000507965 SCN11AQ9UI33 1791 aa7.72□□□□□ -1.17
ATXN3-210ENST00000507965 ATP10DQ9P241 1426 aa7.72□□□□□ -1.17
ATXN3-210ENST00000507965 K7ELQ4 463 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-210ENST00000507965 POU4F2Q12837 409 aa7.72□□□□□ -1.17
ATXN3-210ENST00000507965 NLRP3Q96P20 1036 aa7.72□□□□□ -1.17
ATXN3-210ENST00000507965 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.72□□□□□ -1.17
ATXN3-210ENST00000507965 ADAMTS7Q9UKP4 1686 aa7.71□□□□□ -1.18
ATXN3-210ENST00000507965 A0A1W2PRU2 124 aa7.71□□□□□ -1.18
ATXN3-210ENST00000507965 GIGYF1O75420 1035 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-210ENST00000507965 MPRIPQ6WCQ1 1025 aa7.71□□□□□ -1.18
ATXN3-210ENST00000507965 HMX1Q9NP08 348 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-210ENST00000507965 WWC3Q9ULE0 1092 aa7.71□□□□□ -1.18
ATXN3-210ENST00000507965 MYH14Q7Z406 1995 aaKnown RBP7.71□□□□□ -1.18
ATXN3-210ENST00000507965 ARFGEF1Q9Y6D6 1849 aa7.71□□□□□ -1.18
ATXN3-210ENST00000507965 ADCY9O60503 1353 aa7.71□□□□□ -1.18
ATXN3-210ENST00000507965 OIP5O43482 229 aa7.7□□□□□ -1.18
ATXN3-210ENST00000507965 USP17L8P0C7I0 530 aa7.7□□□□□ -1.18
ATXN3-210ENST00000507965 KDRP35968 1356 aa7.7□□□□□ -1.18
ATXN3-210ENST00000507965 PPM1GO15355 546 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-210ENST00000507965 MAP2K3P46734 347 aa7.69□□□□□ -1.18
ATXN3-210ENST00000507965 LINC00116Q8NCU8 138 aa7.69□□□□□ -1.18
ATXN3-210ENST00000507965 PIGBQ92521 554 aa7.69□□□□□ -1.18
ATXN3-210ENST00000507965 OXCT2Q9BYC2 517 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-210ENST00000507965 NUCKS1Q9H1E3 243 aaKnown RBP7.69□□□□□ -1.18
ATXN3-210ENST00000507965 DLEC1Q9Y238 1755 aa7.69□□□□□ -1.18
ATXN3-210ENST00000507965 PXDNLA1KZ92 1463 aa7.68□□□□□ -1.18
ATXN3-210ENST00000507965 ITPK1Q13572 414 aa7.68□□□□□ -1.18
ATXN3-210ENST00000507965 CC2D2BQ6DHV5 1058 aa7.68□□□□□ -1.18
ATXN3-210ENST00000507965 NBPF10Q6P3W6 841 aaKnown RBP7.68□□□□□ -1.18
ATXN3-210ENST00000507965 NBPF15Q8N660 670 aa7.68□□□□□ -1.18
ATXN3-210ENST00000507965 TIMMDC1Q9NPL8 285 aa7.68□□□□□ -1.18
ATXN3-210ENST00000507965 PCDHB9Q9Y5E1 797 aa7.68□□□□□ -1.18
ATXN3-210ENST00000507965 IGSF1Q8N6C5 1336 aa7.68□□□□□ -1.18
ATXN3-210ENST00000507965 AFDNP55196 1824 aaKnown RBP7.68□□□□□ -1.18
ATXN3-210ENST00000507965 KDM6AO15550 1401 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-210ENST00000507965 SNRPNP63162 240 aaKnown RBP7.67□□□□□ -1.18
ATXN3-210ENST00000507965 ZNF526Q8TF50 670 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-210ENST00000507965 GRIP2Q9C0E4 1043 aa7.67□□□□□ -1.18
ATXN3-210ENST00000507965 ASAP1Q9ULH1 1129 aa7.67□□□□□ -1.18
ATXN3-210ENST00000507965 MKL2Q9ULH7 1088 aa7.67□□□□□ -1.18
ATXN3-210ENST00000507965 CD2APQ9Y5K6 639 aa7.67□□□□□ -1.18
ATXN3-210ENST00000507965 WASHC2AQ641Q2 1341 aa7.67□□□□□ -1.18
ATXN3-210ENST00000507965 TIAM2Q8IVF5 1701 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 WDR90Q96KV7 1748 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 UBR2Q8IWV8 1755 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 LOC102724428A0A0B4J2F2 783 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 KRBA1A5PL33 1030 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 GRIN3BO60391 1043 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 F11P03951 625 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 PHKG2P15735 406 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 TNNT2P45379 298 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-210ENST00000507965 SIK1P57059 783 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 ERVK-9P63128 1117 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 CDCA8Q53HL2 280 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 WDR44Q5JSH3 913 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 CYP2U1Q7Z449 544 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 FLAD1Q8NFF5 587 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 SMARCC1Q92922 1105 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-210ENST00000507965 DDRGK1Q96HY6 314 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 RRAGCQ9HB90 399 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 TMOD3Q9NYL9 352 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 POLKQ9UBT6 870 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 SPG7Q9UQ90 795 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 C10orf71Q711Q0 1435 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 SBF1O95248 1867 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 CACNA1SQ13698 1873 aa7.66□□□□□ -1.18
ATXN3-210ENST00000507965 ZBBXA8MT70 800 aa7.65□□□□□ -1.18
ATXN3-210ENST00000507965 SPATA31C2B4DYI2 1134 aa7.65□□□□□ -1.18
ATXN3-210ENST00000507965 SSFA2P28290 1259 aa7.65□□□□□ -1.18
ATXN3-210ENST00000507965 CLN3Q13286 438 aa7.65□□□□□ -1.18
ATXN3-210ENST00000507965 EIF4A2Q14240 407 aaKnown RBP7.65□□□□□ -1.18
ATXN3-210ENST00000507965 RNF20Q5VTR2 975 aa7.65□□□□□ -1.18
ATXN3-210ENST00000507965 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
ATXN3-210ENST00000507965 ALYREFQ86V81 257 aaKnown RBP7.65□□□□□ -1.18
ATXN3-210ENST00000507965 POLR3GLQ9BT43 218 aa7.65□□□□□ -1.18
ATXN3-210ENST00000507965 CFHR5Q9BXR6 569 aa7.65□□□□□ -1.18
ATXN3-210ENST00000507965 TNRC6CQ9HCJ0 1690 aaKnown RBP7.65□□□□□ -1.18
ATXN3-210ENST00000507965 ATG3Q9NT62 314 aa7.65□□□□□ -1.18
ATXN3-210ENST00000507965 SIPA1L3O60292 1781 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-210ENST00000507965 NRXN2Q9P2S2 1712 aa7.64□□□□□ -1.19
ATXN3-210ENST00000507965 NEUROD2Q15784 382 aa7.64□□□□□ -1.19
ATXN3-210ENST00000507965 SLC4A9Q96Q91 983 aa7.64□□□□□ -1.19
ATXN3-210ENST00000507965 PHF24Q9UPV7 400 aa7.64□□□□□ -1.19
ATXN3-210ENST00000507965 CCDC88AQ3V6T2 1871 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms