RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CXCL9Q07325 125 aa24.5■■□□□ 1.51
USP53-203ENST00000507597 KDM2BQ8NHM5 1336 aa24.5■■□□□ 1.51
USP53-203ENST00000507597 DICER1Q9UPY3 1922 aaKnown RBP24.49■■□□□ 1.51
USP53-203ENST00000507597 YDJCA8MPS7 323 aa24.49■■□□□ 1.51
USP53-203ENST00000507597 VIL1P09327 827 aaKnown RBP24.49■■□□□ 1.51
USP53-203ENST00000507597 MX1P20591 662 aa24.49■■□□□ 1.51
USP53-203ENST00000507597 CHAF1AQ13111 956 aaPredicted RBP24.49■■□□□ 1.51
USP53-203ENST00000507597 GJA3Q9Y6H8 435 aa24.49■■□□□ 1.51
USP53-203ENST00000507597 CCDC88AQ3V6T2 1871 aa24.49■■□□□ 1.51
USP53-203ENST00000507597 GLTPD2A6NH11 291 aa24.48■■□□□ 1.51
USP53-203ENST00000507597 ATP5JP18859 108 aa24.48■■□□□ 1.51
USP53-203ENST00000507597 SPTY2D1Q68D10 685 aaPredicted RBP24.48■■□□□ 1.51
USP53-203ENST00000507597 SPATA5Q8NB90 893 aa24.48■■□□□ 1.51
USP53-203ENST00000507597 AGBL3Q8NEM8 1001 aa24.48■■□□□ 1.51
USP53-203ENST00000507597 ARAP2Q8WZ64 1704 aa24.48■■□□□ 1.51
USP53-203ENST00000507597 TLR7Q9NYK1 1049 aaKnown RBP24.48■■□□□ 1.51
USP53-203ENST00000507597 IQSEC3Q9UPP2 1182 aaPredicted RBP24.48■■□□□ 1.51
USP53-203ENST00000507597 SUGT1Q9Y2Z0 365 aa24.48■■□□□ 1.51
USP53-203ENST00000507597 PSMD14O00487 310 aa24.47■■□□□ 1.51
USP53-203ENST00000507597 GLRX3O76003 335 aaKnown RBP24.47■■□□□ 1.51
USP53-203ENST00000507597 TTF1Q15361 905 aaPredicted RBP24.47■■□□□ 1.51
USP53-203ENST00000507597 RSBN1LQ6PCB5 846 aaPredicted RBP24.47■■□□□ 1.51
USP53-203ENST00000507597 CHD4Q14839 1912 aa24.47■■□□□ 1.51
USP53-203ENST00000507597 GOLGB1Q14789 3259 aaKnown RBP24.46■■□□□ 1.51
USP53-203ENST00000507597 HDAC9Q9UKV0 1011 aa24.46■■□□□ 1.51
USP53-203ENST00000507597 LMOD1P29536 600 aaPredicted RBP24.45■■□□□ 1.5
USP53-203ENST00000507597 RASGRF1Q13972 1273 aa24.45■■□□□ 1.5
USP53-203ENST00000507597 MFSD14BQ5SR56 506 aa24.45■■□□□ 1.5
USP53-203ENST00000507597 C16orf71Q8IYS4 520 aaPredicted RBP24.45■■□□□ 1.5
USP53-203ENST00000507597 OGFOD1Q8N543 542 aa24.45■■□□□ 1.5
USP53-203ENST00000507597 DPF2Q92785 391 aa24.45■■□□□ 1.5
USP53-203ENST00000507597 MAST3O60307 1309 aa24.44■■□□□ 1.5
USP53-203ENST00000507597 AOX1Q06278 1338 aa24.44■■□□□ 1.5
USP53-203ENST00000507597 SALL1Q9NSC2 1324 aa24.44■■□□□ 1.5
USP53-203ENST00000507597 DACT2Q5SW24 774 aa24.44■■□□□ 1.5
USP53-203ENST00000507597 HMG20BQ9P0W2 317 aa24.44■■□□□ 1.5
USP53-203ENST00000507597 STAP2Q9UGK3 403 aa24.44■■□□□ 1.5
USP53-203ENST00000507597 ZNF541Q9H0D2 1346 aa24.43■■□□□ 1.5
USP53-203ENST00000507597 IQCA1LA6NCM1 817 aa24.43■■□□□ 1.5
USP53-203ENST00000507597 MCAMP43121 646 aa24.43■■□□□ 1.5
USP53-203ENST00000507597 PDE1AP54750 535 aa24.43■■□□□ 1.5
USP53-203ENST00000507597 SLF2Q8IX21 1173 aa24.43■■□□□ 1.5
USP53-203ENST00000507597 BOLA2Q9H3K6 86 aa24.43■■□□□ 1.5
USP53-203ENST00000507597 KCNQ5Q9NR82 932 aa24.43■■□□□ 1.5
USP53-203ENST00000507597 LRRFIP1Q32MZ4 808 aaKnown RBP24.42■■□□□ 1.5
USP53-203ENST00000507597 TMED8Q6PL24 325 aaPredicted RBP24.42■■□□□ 1.5
USP53-203ENST00000507597 OSBPL3Q9H4L5 887 aa24.42■■□□□ 1.5
USP53-203ENST00000507597 COL4A5P29400 1685 aa24.42■■□□□ 1.5
USP53-203ENST00000507597 TIAM2Q8IVF5 1701 aa24.41■■□□□ 1.5
USP53-203ENST00000507597 H7C1D1 291 aa24.41■■□□□ 1.5
USP53-203ENST00000507597 DDNO94850 711 aaPredicted RBP24.41■■□□□ 1.5
USP53-203ENST00000507597 LDHBP07195 334 aaKnown RBP24.41■■□□□ 1.5
USP53-203ENST00000507597 YY1P25490 414 aa24.41■■□□□ 1.5
USP53-203ENST00000507597 ERICH6Q7L0X2 663 aa24.41■■□□□ 1.5
USP53-203ENST00000507597 HAUS7Q99871 368 aa24.41■■□□□ 1.5
USP53-203ENST00000507597 LRP2BPQ9P2M1 347 aa24.41■■□□□ 1.5
USP53-203ENST00000507597 ABCF2Q9UG63 623 aa24.41■■□□□ 1.5
USP53-203ENST00000507597 ZAP70P43403 619 aa24.4■■□□□ 1.5
USP53-203ENST00000507597 DNAJC2Q99543 621 aaKnown RBP24.4■■□□□ 1.5
USP53-203ENST00000507597 USP17L8P0C7I0 530 aa24.39■■□□□ 1.49
USP53-203ENST00000507597 PLEKHM2Q8IWE5 1019 aa24.39■■□□□ 1.49
USP53-203ENST00000507597 L3MBTL3Q96JM7 780 aaPredicted RBP24.39■■□□□ 1.49
USP53-203ENST00000507597 SNRKQ9NRH2 765 aa24.39■■□□□ 1.49
USP53-203ENST00000507597 JAG2Q9Y219 1238 aa24.39■■□□□ 1.49
USP53-203ENST00000507597 SALL3Q9BXA9 1300 aa24.38■■□□□ 1.49
USP53-203ENST00000507597 GMPSP49915 693 aaPredicted RBP24.38■■□□□ 1.49
USP53-203ENST00000507597 GSTO1P78417 241 aa24.38■■□□□ 1.49
USP53-203ENST00000507597 MAP3K12Q12852 859 aa24.38■■□□□ 1.49
USP53-203ENST00000507597 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.38■■□□□ 1.49
USP53-203ENST00000507597 PAG1Q9NWQ8 432 aa24.38■■□□□ 1.49
USP53-203ENST00000507597 GTF3C3Q9Y5Q9 886 aa24.38■■□□□ 1.49
USP53-203ENST00000507597 LDHCP07864 332 aa24.37■■□□□ 1.49
USP53-203ENST00000507597 HDLBPQ00341 1268 aaKnown RBP24.37■■□□□ 1.49
USP53-203ENST00000507597 SCARF1Q14162 830 aa24.37■■□□□ 1.49
USP53-203ENST00000507597 ZSCAN25Q6NSZ9 544 aa24.37■■□□□ 1.49
USP53-203ENST00000507597 DZIP1Q86YF9 867 aaKnown RBP24.37■■□□□ 1.49
USP53-203ENST00000507597 OTUD7AQ8TE49 926 aaPredicted RBP24.37■■□□□ 1.49
USP53-203ENST00000507597 MRIQ9BWK5 157 aa24.37■■□□□ 1.49
USP53-203ENST00000507597 CNOT7Q9UIV1 285 aaKnown RBP24.37■■□□□ 1.49
USP53-203ENST00000507597 HACL1Q9UJ83 578 aa24.37■■□□□ 1.49
USP53-203ENST00000507597 ZBTB12Q9Y330 459 aaPredicted RBP24.37■■□□□ 1.49
USP53-203ENST00000507597 CYP2E1P05181 493 aaPredicted RBP24.36■■□□□ 1.49
USP53-203ENST00000507597 KIAA0825Q8IV33 1275 aa24.36■■□□□ 1.49
USP53-203ENST00000507597 GMLQ99445 158 aa24.36■■□□□ 1.49
USP53-203ENST00000507597 RAI14Q9P0K7 980 aa24.36■■□□□ 1.49
USP53-203ENST00000507597 TTF2Q9UNY4 1162 aaKnown RBP24.36■■□□□ 1.49
USP53-203ENST00000507597 GOLIM4O00461 696 aa24.35■■□□□ 1.49
USP53-203ENST00000507597 TICAM2Q86XR7 235 aa24.35■■□□□ 1.49
USP53-203ENST00000507597 PI4K2BQ8TCG2 481 aa24.35■■□□□ 1.49
USP53-203ENST00000507597 GPRC5DQ9NZD1 345 aa24.35■■□□□ 1.49
USP53-203ENST00000507597 MYH13Q9UKX3 1938 aa24.34■■□□□ 1.49
USP53-203ENST00000507597 VEGFAP15692 232 aaPredicted RBP24.34■■□□□ 1.49
USP53-203ENST00000507597 PI16Q6UXB8 463 aa24.34■■□□□ 1.49
USP53-203ENST00000507597 CNTROBQ8N137 903 aa24.34■■□□□ 1.49
USP53-203ENST00000507597 ADARB2Q9NS39 739 aaKnown RBP24.34■■□□□ 1.49
USP53-203ENST00000507597 SERPINA10Q9UK55 444 aa24.34■■□□□ 1.49
USP53-203ENST00000507597 PSME4Q14997 1843 aa24.33■■□□□ 1.49
USP53-203ENST00000507597 TRIM6-TRIM34B2RNG4 842 aa24.33■■□□□ 1.49
USP53-203ENST00000507597 F8W031 263 aaPredicted RBP24.33■■□□□ 1.49
USP53-203ENST00000507597 IDH1O75874 414 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms