RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 EPXP11678 715 aa5.71□□□□□ -1.5
LSM6-205ENST00000507449 ITPKAP23677 461 aa5.71□□□□□ -1.5
LSM6-205ENST00000507449 GSTT1P30711 240 aa5.71□□□□□ -1.5
LSM6-205ENST00000507449 RAD51AP2Q09MP3 1159 aa5.71□□□□□ -1.5
LSM6-205ENST00000507449 PCSK7Q16549 785 aa5.71□□□□□ -1.5
LSM6-205ENST00000507449 ELOA3BQ3SY89 546 aa5.71□□□□□ -1.5
LSM6-205ENST00000507449 ELOA3Q8NG57 546 aa5.71□□□□□ -1.5
LSM6-205ENST00000507449 SPACA7Q96KW9 195 aa5.71□□□□□ -1.5
LSM6-205ENST00000507449 METTL5Q9NRN9 209 aaKnown RBP5.71□□□□□ -1.5
LSM6-205ENST00000507449 GHRHP01286 108 aa5.7□□□□□ -1.5
LSM6-205ENST00000507449 ZNF76P36508 570 aa5.7□□□□□ -1.5
LSM6-205ENST00000507449 ITGAEP38570 1179 aa5.7□□□□□ -1.5
LSM6-205ENST00000507449 ST13P50502 369 aaKnown RBP5.7□□□□□ -1.5
LSM6-205ENST00000507449 TAF1CQ15572 869 aaPredicted RBP5.7□□□□□ -1.5
LSM6-205ENST00000507449 GRIK5Q16478 980 aa5.7□□□□□ -1.5
LSM6-205ENST00000507449 C20orf204Q6ZNR8 217 aa5.7□□□□□ -1.5
LSM6-205ENST00000507449 GOLGA6L1Q8N7Z2 621 aa5.7□□□□□ -1.5
LSM6-205ENST00000507449 SMG9Q9H0W8 520 aaKnown RBP5.7□□□□□ -1.5
LSM6-205ENST00000507449 MUC3BQ9H195 1237 aa5.7□□□□□ -1.5
LSM6-205ENST00000507449 ZNF576Q9H609 170 aa5.7□□□□□ -1.5
LSM6-205ENST00000507449 TRIM33Q9UPN9 1127 aa5.7□□□□□ -1.5
LSM6-205ENST00000507449 A0A096LPE4 126 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 A0A1W2PPZ6 126 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 FBXO24O75426 580 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 YBX3P16989 372 aaKnown RBP eCLIP5.69□□□□□ -1.53e-6■□□□□ 8.1
LSM6-205ENST00000507449 PTPN12Q05209 780 aaKnown RBP5.69□□□□□ -1.5
LSM6-205ENST00000507449 FAAP100Q0VG06 881 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 CEP135Q66GS9 1140 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 PSAPL1Q6NUJ1 521 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 ELMSAN1Q6PJG2 1045 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 NT5DC4Q86YG4 428 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 ANKRD24Q8TF21 1146 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 RNF34Q969K3 372 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 FRRS1LQ9P0K9 344 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 GDF2Q9UK05 429 aaPredicted RBP5.69□□□□□ -1.5
LSM6-205ENST00000507449 SOX13Q9UN79 622 aa5.69□□□□□ -1.5
LSM6-205ENST00000507449 SHISA8B8ZZ34 492 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 ALBP02768 609 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 DTHD1Q6ZMT9 781 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 VN1R5Q7Z5H4 357 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 ASAP3Q8TDY4 903 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 NUDT8Q8WV74 236 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 TRIM56Q9BRZ2 755 aaKnown RBP5.68□□□□□ -1.5
LSM6-205ENST00000507449 COPRSQ9NQ92 184 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 PPM1HQ9ULR3 514 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 AKAP2Q9Y2D5 859 aa5.68□□□□□ -1.5
LSM6-205ENST00000507449 OIP5O43482 229 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 SMNDC1O75940 238 aaKnown RBP eCLIP5.67□□□□□ -1.5
LSM6-205ENST00000507449 XRCC5P13010 732 aaKnown RBP5.67□□□□□ -1.5
LSM6-205ENST00000507449 TXKP42681 527 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 ZNF394Q53GI3 561 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 ARTNQ5T4W7 220 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 C8orf86Q6ZUL3 223 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 ERMP1Q7Z2K6 904 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 TTC9Q92623 222 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 LACRTQ9GZZ8 138 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 ADAM19Q9H013 955 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 RBSNQ9H1K0 784 aa5.67□□□□□ -1.5
LSM6-205ENST00000507449 SH2B1Q9NRF2 756 aaPredicted RBP5.67□□□□□ -1.5
LSM6-205ENST00000507449 TTF2Q9UNY4 1162 aaKnown RBP5.67□□□□□ -1.5
LSM6-205ENST00000507449 CELA3AP09093 270 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 HOXB4P17483 251 aaPredicted RBP5.66□□□□□ -1.5
LSM6-205ENST00000507449 EPHA1P21709 976 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 ERCC5P28715 1186 aaPredicted RBP5.66□□□□□ -1.5
LSM6-205ENST00000507449 RACK1P63244 317 aaKnown RBP5.66□□□□□ -1.5
LSM6-205ENST00000507449 COL9A3Q14050 684 aaPredicted RBP5.66□□□□□ -1.5
LSM6-205ENST00000507449 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 TPTE2Q6XPS3 522 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 MICALL1Q8N3F8 863 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 EDARADDQ8WWZ3 215 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 BSNDQ8WZ55 320 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 SRA1Q9HD15 236 aaKnown RBP5.66□□□□□ -1.5
LSM6-205ENST00000507449 SEC31BQ9NQW1 1179 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 PPP4R2Q9NY27 417 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 PCDHGB7Q9Y5F8 929 aa5.66□□□□□ -1.5
LSM6-205ENST00000507449 F6X3S4 739 aa5.65□□□□□ -1.5
LSM6-205ENST00000507449 ENC1O14682 589 aa5.65□□□□□ -1.5
LSM6-205ENST00000507449 PAGE1O75459 146 aa5.65□□□□□ -1.5
LSM6-205ENST00000507449 RGS9O75916 674 aaPredicted RBP5.65□□□□□ -1.5
LSM6-205ENST00000507449 ALAS2P22557 587 aa5.65□□□□□ -1.5
LSM6-205ENST00000507449 AFF1P51825 1210 aaKnown RBP5.65□□□□□ -1.5
LSM6-205ENST00000507449 ZNF423Q2M1K9 1284 aa5.65□□□□□ -1.5
LSM6-205ENST00000507449 RPS26P11Q5JNZ5 115 aaPredicted RBP5.65□□□□□ -1.5
LSM6-205ENST00000507449 GDF6Q6KF10 455 aaPredicted RBP5.65□□□□□ -1.5
LSM6-205ENST00000507449 CHSY3Q70JA7 882 aa5.65□□□□□ -1.5
LSM6-205ENST00000507449 ILDR2Q71H61 639 aa5.65□□□□□ -1.5
LSM6-205ENST00000507449 BTBD6Q96KE9 485 aa5.65□□□□□ -1.5
LSM6-205ENST00000507449 NECAB3Q96P71 396 aaPredicted RBP5.65□□□□□ -1.5
LSM6-205ENST00000507449 NOC4LQ9BVI4 516 aaKnown RBP5.65□□□□□ -1.5
LSM6-205ENST00000507449 CLEC4MQ9H2X3 399 aaPredicted RBP5.65□□□□□ -1.5
LSM6-205ENST00000507449 JPH1Q9HDC5 661 aaPredicted RBP5.65□□□□□ -1.5
LSM6-205ENST00000507449 GGT7Q9UJ14 662 aa5.65□□□□□ -1.5
LSM6-205ENST00000507449 DDX41Q9UJV9 622 aaKnown RBP5.65□□□□□ -1.5
LSM6-205ENST00000507449 M0R082 166 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 PTPRAP18433 802 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 PCDH1Q08174 1060 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 CCDC85BQ15834 202 aaPredicted RBP5.64□□□□□ -1.51
LSM6-205ENST00000507449 RASIP1Q5U651 963 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 HGSNATQ68CP4 663 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms