RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 ANKRD2Q9GZV1 360 aa17.08■□□□□ 0.32
POLR2J3-212ENST00000507355 MANSC4A6NHS7 340 aaPredicted RBP17.07■□□□□ 0.32
POLR2J3-212ENST00000507355 KLRK1P26718 216 aa17.07■□□□□ 0.32
POLR2J3-212ENST00000507355 LDLRAD1Q5T700 205 aa17.07■□□□□ 0.32
POLR2J3-212ENST00000507355 IFNL1Q8IU54 200 aa17.07■□□□□ 0.32
POLR2J3-212ENST00000507355 SLC10A4Q96EP9 437 aa17.07■□□□□ 0.32
POLR2J3-212ENST00000507355 CLMNQ96JQ2 1002 aa17.07■□□□□ 0.32
POLR2J3-212ENST00000507355 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
POLR2J3-212ENST00000507355 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
POLR2J3-212ENST00000507355 RBBP6Q7Z6E9 1792 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-212ENST00000507355 ANKRD18BA2A2Z9 1011 aa17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 F6X3S4 739 aa17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 IGF2BP3O00425 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 GTF2IP78347 998 aa17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 CHRNDQ07001 517 aa17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 INTS3Q68E01 1043 aaKnown RBP17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 CD99L2Q8TCZ2 262 aa17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 DEFB129Q9H1M3 183 aa17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 CACNA1FO60840 1977 aa17.05■□□□□ 0.32
POLR2J3-212ENST00000507355 SSC5DA1L4H1 1573 aa17.04■□□□□ 0.32
POLR2J3-212ENST00000507355 SNAP23O00161 211 aa17.04■□□□□ 0.32
POLR2J3-212ENST00000507355 KCNJ4P48050 445 aa17.04■□□□□ 0.32
POLR2J3-212ENST00000507355 FOXO4P98177 505 aa17.04■□□□□ 0.32
POLR2J3-212ENST00000507355 BEND3Q5T5X7 828 aa17.04■□□□□ 0.32
POLR2J3-212ENST00000507355 HELBQ8NG08 1087 aaPredicted RBP17.04■□□□□ 0.32
POLR2J3-212ENST00000507355 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
POLR2J3-212ENST00000507355 COL1A1P02452 1464 aaPredicted RBP17.04■□□□□ 0.32
POLR2J3-212ENST00000507355 BRCA2P51587 3418 aa17.03■□□□□ 0.32
POLR2J3-212ENST00000507355 CEP290O15078 2479 aa17.03■□□□□ 0.32
POLR2J3-212ENST00000507355 TAF5LO75529 589 aa17.03■□□□□ 0.32
POLR2J3-212ENST00000507355 EN2P19622 333 aaPredicted RBP17.03■□□□□ 0.32
POLR2J3-212ENST00000507355 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
POLR2J3-212ENST00000507355 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
POLR2J3-212ENST00000507355 CD209Q9NNX6 404 aa17.03■□□□□ 0.32
POLR2J3-212ENST00000507355 PTPN22Q9Y2R2 807 aa17.03■□□□□ 0.32
POLR2J3-212ENST00000507355 LAMB1P07942 1786 aa17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 ZBTB48P10074 688 aaPredicted RBP17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 MMP14P50281 582 aa17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 INHBEP58166 350 aa17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 CRHR2Q13324 411 aa17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 IFIT5Q13325 482 aaKnown RBP17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 DLGAP5Q15398 846 aa17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 ZBED3Q96IU2 234 aaPredicted RBP17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 PCDHAC2Q9Y5I4 1007 aa17.02■□□□□ 0.32
POLR2J3-212ENST00000507355 ECM29Q5VYK3 1845 aa17.02■□□□□ 0.31
POLR2J3-212ENST00000507355 CLRN2A0PK11 232 aa17.01■□□□□ 0.31
POLR2J3-212ENST00000507355 F8W031 263 aaPredicted RBP17.01■□□□□ 0.31
POLR2J3-212ENST00000507355 PPP1R12BO60237 982 aaPredicted RBP17.01■□□□□ 0.31
POLR2J3-212ENST00000507355 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
POLR2J3-212ENST00000507355 FXR1P51114 621 aaKnown RBP eCLIP17■□□□□ 0.31
POLR2J3-212ENST00000507355 MAP3K11Q16584 847 aa17■□□□□ 0.31
POLR2J3-212ENST00000507355 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
POLR2J3-212ENST00000507355 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
POLR2J3-212ENST00000507355 ZNF594Q96JF6 807 aaPredicted RBP17■□□□□ 0.31
POLR2J3-212ENST00000507355 EFCC1Q9HA90 598 aa17■□□□□ 0.31
POLR2J3-212ENST00000507355 VEZTQ9HBM0 779 aa17■□□□□ 0.31
POLR2J3-212ENST00000507355 IRS2Q9Y4H2 1338 aa16.99■□□□□ 0.31
POLR2J3-212ENST00000507355 GJA5P36382 358 aa16.99■□□□□ 0.31
POLR2J3-212ENST00000507355 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
POLR2J3-212ENST00000507355 C15orf52Q6ZUT6 534 aaKnown RBP16.99■□□□□ 0.31
POLR2J3-212ENST00000507355 CERS5Q8N5B7 392 aa16.99■□□□□ 0.31
POLR2J3-212ENST00000507355 ARMC5Q96C12 935 aa16.99■□□□□ 0.31
POLR2J3-212ENST00000507355 OTOFQ9HC10 1997 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 TRIOBPQ9H2D6 2365 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 GRM8O00222 908 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 MYO1BO43795 1136 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 PLIN1O60240 522 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 CAP1Q01518 475 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 SUPT20HL1Q3ZLR7 823 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 CFAP100Q494V2 611 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 NBPF12Q5TAG4 269 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 LDHAL6AQ6ZMR3 332 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 C9orf78Q9NZ63 289 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 JAG2Q9Y219 1238 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 PPP2R3BQ9Y5P8 575 aa16.98■□□□□ 0.31
POLR2J3-212ENST00000507355 AOX1Q06278 1338 aa16.97■□□□□ 0.31
POLR2J3-212ENST00000507355 MYCP01106 439 aaPredicted RBP16.97■□□□□ 0.31
POLR2J3-212ENST00000507355 IREB2P48200 963 aaKnown RBP16.97■□□□□ 0.31
POLR2J3-212ENST00000507355 SP3Q02447 781 aa16.97■□□□□ 0.31
POLR2J3-212ENST00000507355 TAF7LQ5H9L4 462 aa16.97■□□□□ 0.31
POLR2J3-212ENST00000507355 SLC4A10Q6U841 1118 aa16.97■□□□□ 0.31
POLR2J3-212ENST00000507355 ZNF804AQ7Z570 1209 aa16.97■□□□□ 0.31
POLR2J3-212ENST00000507355 PTPN18Q99952 460 aa16.97■□□□□ 0.31
POLR2J3-212ENST00000507355 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
POLR2J3-212ENST00000507355 ALDH1L1O75891 902 aa16.96■□□□□ 0.31
POLR2J3-212ENST00000507355 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
POLR2J3-212ENST00000507355 IL1R1P14778 569 aa16.96■□□□□ 0.31
POLR2J3-212ENST00000507355 TMEM106CQ9BVX2 250 aa16.96■□□□□ 0.31
POLR2J3-212ENST00000507355 ELP3Q9H9T3 547 aa16.96■□□□□ 0.31
POLR2J3-212ENST00000507355 CNNM1Q9NRU3 951 aa16.96■□□□□ 0.31
POLR2J3-212ENST00000507355 COLQQ9Y215 455 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-212ENST00000507355 RBM5P52756 815 aaKnown RBP eCLIP16.95■□□□□ 0.3
POLR2J3-212ENST00000507355 ANKRD13AQ8IZ07 590 aa16.95■□□□□ 0.3
POLR2J3-212ENST00000507355 MTMR14Q8NCE2 650 aa16.95■□□□□ 0.3
POLR2J3-212ENST00000507355 ZNF333Q96JL9 665 aa16.95■□□□□ 0.3
POLR2J3-212ENST00000507355 PRMT6Q96LA8 375 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms