RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 TESPA1A2RU30 521 aaPredicted RBP21.11■□□□□ 0.97
SNF8-205ENST00000507302 POTEFA5A3E0 1075 aa21.11■□□□□ 0.97
SNF8-205ENST00000507302 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
SNF8-205ENST00000507302 GCKRQ14397 625 aa21.11■□□□□ 0.97
SNF8-205ENST00000507302 HABP4Q5JVS0 413 aaKnown RBP21.11■□□□□ 0.97
SNF8-205ENST00000507302 ARMC5Q96C12 935 aa21.11■□□□□ 0.97
SNF8-205ENST00000507302 CLMNQ96JQ2 1002 aa21.11■□□□□ 0.97
SNF8-205ENST00000507302 TRIM17Q9Y577 477 aa21.11■□□□□ 0.97
SNF8-205ENST00000507302 IL1R1P14778 569 aa21.1■□□□□ 0.97
SNF8-205ENST00000507302 CHRNDQ07001 517 aa21.1■□□□□ 0.97
SNF8-205ENST00000507302 DLGAP5Q15398 846 aa21.1■□□□□ 0.97
SNF8-205ENST00000507302 PTPN22Q9Y2R2 807 aa21.1■□□□□ 0.97
SNF8-205ENST00000507302 SPDYE2BA6NHP3 402 aa21.09■□□□□ 0.97
SNF8-205ENST00000507302 PPP1R12BO60237 982 aaPredicted RBP21.09■□□□□ 0.97
SNF8-205ENST00000507302 SPDYE6P0CI01 402 aa21.09■□□□□ 0.97
SNF8-205ENST00000507302 GJA5P36382 358 aa21.09■□□□□ 0.97
SNF8-205ENST00000507302 G2E3Q7L622 706 aa21.09■□□□□ 0.97
SNF8-205ENST00000507302 PRKRIP1Q9H875 184 aaPredicted RBP21.09■□□□□ 0.97
SNF8-205ENST00000507302 PCDHAC2Q9Y5I4 1007 aa21.09■□□□□ 0.97
SNF8-205ENST00000507302 ERO1AQ96HE7 468 aa21.08■□□□□ 0.97
SNF8-205ENST00000507302 MPHOSPH8Q99549 860 aa21.08■□□□□ 0.97
SNF8-205ENST00000507302 USP2O75604 605 aaPredicted RBP21.07■□□□□ 0.96
SNF8-205ENST00000507302 CAP1Q01518 475 aa21.07■□□□□ 0.96
SNF8-205ENST00000507302 CRHR2Q13324 411 aa21.07■□□□□ 0.96
SNF8-205ENST00000507302 SUPT20HL1Q3ZLR7 823 aa21.07■□□□□ 0.96
SNF8-205ENST00000507302 PRMT6Q96LA8 375 aaPredicted RBP21.07■□□□□ 0.96
SNF8-205ENST00000507302 PTPN18Q99952 460 aa21.07■□□□□ 0.96
SNF8-205ENST00000507302 STK31Q9BXU1 1019 aa21.07■□□□□ 0.96
SNF8-205ENST00000507302 AOX1Q06278 1338 aa21.06■□□□□ 0.96
SNF8-205ENST00000507302 CFAP100Q494V2 611 aa21.06■□□□□ 0.96
SNF8-205ENST00000507302 ARAP2Q8WZ64 1704 aa21.06■□□□□ 0.96
SNF8-205ENST00000507302 SNAP23O00161 211 aa21.05■□□□□ 0.96
SNF8-205ENST00000507302 CCDC27Q2M243 656 aa21.05■□□□□ 0.96
SNF8-205ENST00000507302 NBPF12Q5TAG4 269 aaPredicted RBP21.05■□□□□ 0.96
SNF8-205ENST00000507302 LINS1Q8NG48 757 aa21.05■□□□□ 0.96
SNF8-205ENST00000507302 SLC4A2P04920 1241 aa21.04■□□□□ 0.96
SNF8-205ENST00000507302 OTUD7BQ6GQQ9 843 aa21.04■□□□□ 0.96
SNF8-205ENST00000507302 ANKRD13AQ8IZ07 590 aa21.04■□□□□ 0.96
SNF8-205ENST00000507302 CD99L2Q8TCZ2 262 aa21.04■□□□□ 0.96
SNF8-205ENST00000507302 TSR2Q969E8 191 aaKnown RBP21.04■□□□□ 0.96
SNF8-205ENST00000507302 MS4A4AQ96JQ5 239 aa21.04■□□□□ 0.96
SNF8-205ENST00000507302 MYO1BO43795 1136 aa21.03■□□□□ 0.96
SNF8-205ENST00000507302 KCNJ4P48050 445 aa21.03■□□□□ 0.96
SNF8-205ENST00000507302 IREB2P48200 963 aaKnown RBP21.03■□□□□ 0.96
SNF8-205ENST00000507302 FOXO4P98177 505 aa21.03■□□□□ 0.96
SNF8-205ENST00000507302 FLIIQ13045 1269 aa21.03■□□□□ 0.96
SNF8-205ENST00000507302 TWISTNBQ3B726 338 aaPredicted RBP21.03■□□□□ 0.96
SNF8-205ENST00000507302 MYH16Q9H6N6 1097 aa21.03■□□□□ 0.96
SNF8-205ENST00000507302 FAM205AQ6ZU69 1335 aa21.03■□□□□ 0.96
SNF8-205ENST00000507302 ANKRD18BA2A2Z9 1011 aa21.02■□□□□ 0.96
SNF8-205ENST00000507302 TAF5LO75529 589 aa21.02■□□□□ 0.96
SNF8-205ENST00000507302 SP3Q02447 781 aa21.02■□□□□ 0.96
SNF8-205ENST00000507302 RASA3Q14644 834 aa21.02■□□□□ 0.96
SNF8-205ENST00000507302 DNAAF4Q8WXU2 420 aa21.02■□□□□ 0.96
SNF8-205ENST00000507302 EFCC1Q9HA90 598 aa21.02■□□□□ 0.96
SNF8-205ENST00000507302 CLRN2A0PK11 232 aa21.01■□□□□ 0.95
SNF8-205ENST00000507302 EN2P19622 333 aaPredicted RBP21.01■□□□□ 0.95
SNF8-205ENST00000507302 ZNF804AQ7Z570 1209 aa21.01■□□□□ 0.95
SNF8-205ENST00000507302 ZNF333Q96JL9 665 aa21.01■□□□□ 0.95
SNF8-205ENST00000507302 TEPSINQ96N21 525 aa21.01■□□□□ 0.95
SNF8-205ENST00000507302 IL16Q14005 1332 aa21.01■□□□□ 0.95
SNF8-205ENST00000507302 FXR1P51114 621 aaKnown RBP eCLIP21■□□□□ 0.95
SNF8-205ENST00000507302 SPDYE2Q495Y8 402 aa21■□□□□ 0.95
SNF8-205ENST00000507302 NCBP3Q53F19 620 aaKnown RBP21■□□□□ 0.95
SNF8-205ENST00000507302 WWC1Q8IX03 1113 aa20.99■□□□□ 0.95
SNF8-205ENST00000507302 HELBQ8NG08 1087 aaPredicted RBP20.99■□□□□ 0.95
SNF8-205ENST00000507302 F8W031 263 aaPredicted RBP20.98■□□□□ 0.95
SNF8-205ENST00000507302 IFIT5Q13325 482 aaKnown RBP20.98■□□□□ 0.95
SNF8-205ENST00000507302 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.98■□□□□ 0.95
SNF8-205ENST00000507302 OPTNQ96CV9 577 aa20.98■□□□□ 0.95
SNF8-205ENST00000507302 VEZTQ9HBM0 779 aa20.98■□□□□ 0.95
SNF8-205ENST00000507302 SERPINA10Q9UK55 444 aa20.98■□□□□ 0.95
SNF8-205ENST00000507302 TNFAIP1Q13829 316 aa20.97■□□□□ 0.95
SNF8-205ENST00000507302 TDRD7Q8NHU6 1098 aaKnown RBP20.97■□□□□ 0.95
SNF8-205ENST00000507302 BRI3BPQ8WY22 251 aa20.97■□□□□ 0.95
SNF8-205ENST00000507302 ZNF70Q9UC06 446 aaPredicted RBP20.97■□□□□ 0.95
SNF8-205ENST00000507302 CEP290O15078 2479 aa20.97■□□□□ 0.95
SNF8-205ENST00000507302 FKBP5Q13451 457 aaPredicted RBP20.96■□□□□ 0.95
SNF8-205ENST00000507302 BEND3Q5T5X7 828 aa20.95■□□□□ 0.94
SNF8-205ENST00000507302 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.95■□□□□ 0.943e-6■■■■■ 38.3
SNF8-205ENST00000507302 ELP3Q9H9T3 547 aa20.95■□□□□ 0.94
SNF8-205ENST00000507302 EPHA10Q5JZY3 1008 aa20.94■□□□□ 0.94
SNF8-205ENST00000507302 CDAN1Q8IWY9 1227 aa20.94■□□□□ 0.94
SNF8-205ENST00000507302 SZT2Q5T011 3432 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 ZSWIM8A7E2V4 1837 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 VAMP4O75379 141 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 GTF2A2P52657 109 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 VGLL4Q14135 290 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 UBE4AQ14139 1066 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 ARHGEF6Q15052 776 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 MFSD14BQ5SR56 506 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 DZIP1LQ8IYY4 767 aaKnown RBP20.93■□□□□ 0.94
SNF8-205ENST00000507302 CNKSR2Q8WXI2 1034 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 TMEM106CQ9BVX2 250 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 ZFYVE28Q9HCC9 887 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 ZCCHC17Q9NP64 241 aaKnown RBP20.93■□□□□ 0.94
SNF8-205ENST00000507302 JAG2Q9Y219 1238 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 PTCH2Q9Y6C5 1203 aa20.93■□□□□ 0.94
SNF8-205ENST00000507302 MAP3K9P80192 1104 aa20.92■□□□□ 0.94
SNF8-205ENST00000507302 LMBR1LQ6UX01 489 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms